RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
HDAC6-210ENST00000441703 ABCC9O60706 1549 aa15.48■□□□□ 0.07
HDAC6-210ENST00000441703 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
HDAC6-210ENST00000441703 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
HDAC6-210ENST00000441703 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
HDAC6-210ENST00000441703 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDAC6-210ENST00000441703 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
HDAC6-210ENST00000441703 NACADO15069 1562 aa14.21□□□□□ -0.14
HDAC6-210ENST00000441703 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
HDAC6-210ENST00000441703 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
HDAC6-210ENST00000441703 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
HDAC6-210ENST00000441703 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
HDAC6-210ENST00000441703 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
HDAC6-210ENST00000441703 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
HDAC6-210ENST00000441703 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
HDAC6-210ENST00000441703 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
HDAC6-210ENST00000441703 CUX2O14529 1486 aa13.61□□□□□ -0.23
HDAC6-210ENST00000441703 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
HDAC6-210ENST00000441703 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
HDAC6-210ENST00000441703 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
HDAC6-210ENST00000441703 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
HDAC6-210ENST00000441703 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
HDAC6-210ENST00000441703 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
HDAC6-210ENST00000441703 NESP48681 1621 aa13.1□□□□□ -0.31
HDAC6-210ENST00000441703 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
HDAC6-210ENST00000441703 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
HDAC6-210ENST00000441703 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
HDAC6-210ENST00000441703 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
HDAC6-210ENST00000441703 LAMC3Q9Y6N6 1575 aa12.93□□□□□ -0.34
HDAC6-210ENST00000441703 KIF21AQ7Z4S6 1674 aa12.92□□□□□ -0.34
HDAC6-210ENST00000441703 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-210ENST00000441703 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
HDAC6-210ENST00000441703 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
HDAC6-210ENST00000441703 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-210ENST00000441703 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
HDAC6-210ENST00000441703 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
HDAC6-210ENST00000441703 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
HDAC6-210ENST00000441703 WDR62O43379 1518 aa12.78□□□□□ -0.36
HDAC6-210ENST00000441703 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.37
HDAC6-210ENST00000441703 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.37
HDAC6-210ENST00000441703 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.37
HDAC6-210ENST00000441703 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-210ENST00000441703 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
HDAC6-210ENST00000441703 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
HDAC6-210ENST00000441703 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
HDAC6-210ENST00000441703 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
HDAC6-210ENST00000441703 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
HDAC6-210ENST00000441703 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
HDAC6-210ENST00000441703 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
HDAC6-210ENST00000441703 ARAP1Q96P48 1450 aa12.49□□□□□ -0.41
HDAC6-210ENST00000441703 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
HDAC6-210ENST00000441703 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-210ENST00000441703 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-210ENST00000441703 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
HDAC6-210ENST00000441703 CFTRP13569 1480 aa12.4□□□□□ -0.42
HDAC6-210ENST00000441703 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-210ENST00000441703 CHD1O14646 1710 aa12.37□□□□□ -0.43
HDAC6-210ENST00000441703 FBLN2P98095 1184 aa12.36□□□□□ -0.43
HDAC6-210ENST00000441703 EIF4G3O43432 1585 aaKnown RBP12.35□□□□□ -0.43
HDAC6-210ENST00000441703 WIZO95785 1651 aa12.34□□□□□ -0.43
HDAC6-210ENST00000441703 PRDM2Q13029 1718 aa12.25□□□□□ -0.45
HDAC6-210ENST00000441703 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.451e-14■■■■■ 33.6
HDAC6-210ENST00000441703 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
HDAC6-210ENST00000441703 ABCC8Q09428 1581 aa12.21□□□□□ -0.46
HDAC6-210ENST00000441703 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
HDAC6-210ENST00000441703 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
HDAC6-210ENST00000441703 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
HDAC6-210ENST00000441703 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-210ENST00000441703 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
HDAC6-210ENST00000441703 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
HDAC6-210ENST00000441703 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
HDAC6-210ENST00000441703 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
HDAC6-210ENST00000441703 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-210ENST00000441703 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
HDAC6-210ENST00000441703 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-210ENST00000441703 RAD54L2Q9Y4B4 1467 aa12.04□□□□□ -0.48
HDAC6-210ENST00000441703 SOGA1O94964 1423 aa12.03□□□□□ -0.48
HDAC6-210ENST00000441703 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
HDAC6-210ENST00000441703 WDR97A6NE52 1622 aa12.03□□□□□ -0.48
HDAC6-210ENST00000441703 SYNJ2O15056 1496 aa12.02□□□□□ -0.48
HDAC6-210ENST00000441703 CCDC88BA6NC98 1476 aa12.01□□□□□ -0.49
HDAC6-210ENST00000441703 GRIN2BQ13224 1484 aa12.01□□□□□ -0.49
HDAC6-210ENST00000441703 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
HDAC6-210ENST00000441703 ERCC6L2Q5T890 1561 aa11.94□□□□□ -0.5
HDAC6-210ENST00000441703 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
HDAC6-210ENST00000441703 FGD5Q6ZNL6 1462 aa11.93□□□□□ -0.5
HDAC6-210ENST00000441703 KDM6BO15054 1643 aa11.93□□□□□ -0.5
HDAC6-210ENST00000441703 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
HDAC6-210ENST00000441703 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
HDAC6-210ENST00000441703 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC6-210ENST00000441703 ABCC10Q5T3U5 1492 aa11.88□□□□□ -0.51
HDAC6-210ENST00000441703 HECW2Q9P2P5 1572 aa11.86□□□□□ -0.51
HDAC6-210ENST00000441703 FBXO41Q8TF61 875 aa11.85□□□□□ -0.51
HDAC6-210ENST00000441703 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
HDAC6-210ENST00000441703 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
HDAC6-210ENST00000441703 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
HDAC6-210ENST00000441703 TSPOAP1O95153 1857 aa11.81□□□□□ -0.52
HDAC6-210ENST00000441703 NUP160Q12769 1436 aa11.8□□□□□ -0.52
HDAC6-210ENST00000441703 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
HDAC6-210ENST00000441703 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms