RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
PCGF3-207ENST00000440452 CFAP43Q8NDM7 1665 aa16.83■□□□□ 0.29
PCGF3-207ENST00000440452 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
PCGF3-207ENST00000440452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.282e-7■■■□□ 14.8
PCGF3-207ENST00000440452 PKD2Q13563 968 aa16.82■□□□□ 0.28
PCGF3-207ENST00000440452 PPP4R2Q9NY27 417 aa16.82■□□□□ 0.28
PCGF3-207ENST00000440452 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
PCGF3-207ENST00000440452 IL27Q8NEV9 243 aa16.81■□□□□ 0.28
PCGF3-207ENST00000440452 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
PCGF3-207ENST00000440452 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
PCGF3-207ENST00000440452 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
PCGF3-207ENST00000440452 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
PCGF3-207ENST00000440452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.286e-7■■■■■ 74.7
PCGF3-207ENST00000440452 CUL7Q14999 1698 aa16.77■□□□□ 0.28
PCGF3-207ENST00000440452 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
PCGF3-207ENST00000440452 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
PCGF3-207ENST00000440452 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
PCGF3-207ENST00000440452 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
PCGF3-207ENST00000440452 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
PCGF3-207ENST00000440452 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
PCGF3-207ENST00000440452 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
PCGF3-207ENST00000440452 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
PCGF3-207ENST00000440452 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
PCGF3-207ENST00000440452 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
PCGF3-207ENST00000440452 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
PCGF3-207ENST00000440452 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
PCGF3-207ENST00000440452 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
PCGF3-207ENST00000440452 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
PCGF3-207ENST00000440452 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-207ENST00000440452 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.277e-7■■■■■ 38.1
PCGF3-207ENST00000440452 PRG4Q92954 1404 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-207ENST00000440452 NEFMP07197 916 aa16.7■□□□□ 0.26
PCGF3-207ENST00000440452 DAXXQ9UER7 740 aaPredicted RBP16.7■□□□□ 0.26
PCGF3-207ENST00000440452 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
PCGF3-207ENST00000440452 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
PCGF3-207ENST00000440452 KDM6BO15054 1643 aa16.67■□□□□ 0.26
PCGF3-207ENST00000440452 NUP155O75694 1391 aa16.67■□□□□ 0.26
PCGF3-207ENST00000440452 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
PCGF3-207ENST00000440452 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
PCGF3-207ENST00000440452 CNTLNQ9NXG0 1405 aa16.66■□□□□ 0.26
PCGF3-207ENST00000440452 UGGT2Q9NYU1 1516 aa16.66■□□□□ 0.26
PCGF3-207ENST00000440452 DAPK1P53355 1430 aa16.64■□□□□ 0.25
PCGF3-207ENST00000440452 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
PCGF3-207ENST00000440452 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
PCGF3-207ENST00000440452 ABCC5O15440 1437 aa16.62■□□□□ 0.25
PCGF3-207ENST00000440452 ANKRD30BQ9BXX2 1392 aa16.62■□□□□ 0.25
PCGF3-207ENST00000440452 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
PCGF3-207ENST00000440452 USP47Q96K76 1375 aa16.61■□□□□ 0.25
PCGF3-207ENST00000440452 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
PCGF3-207ENST00000440452 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
PCGF3-207ENST00000440452 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
PCGF3-207ENST00000440452 SAMD9Q5K651 1589 aa16.6■□□□□ 0.25
PCGF3-207ENST00000440452 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
PCGF3-207ENST00000440452 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
PCGF3-207ENST00000440452 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
PCGF3-207ENST00000440452 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
PCGF3-207ENST00000440452 DENND4BO75064 1496 aaPredicted RBP16.57■□□□□ 0.24
PCGF3-207ENST00000440452 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
PCGF3-207ENST00000440452 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
PCGF3-207ENST00000440452 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
PCGF3-207ENST00000440452 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
PCGF3-207ENST00000440452 ARXQ96QS3 562 aa16.55■□□□□ 0.24
PCGF3-207ENST00000440452 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
PCGF3-207ENST00000440452 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
PCGF3-207ENST00000440452 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
PCGF3-207ENST00000440452 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.23
PCGF3-207ENST00000440452 ANKRD50Q9ULJ7 1429 aa16.51■□□□□ 0.23
PCGF3-207ENST00000440452 RPRD2Q5VT52 1461 aaKnown RBP16.51■□□□□ 0.23
PCGF3-207ENST00000440452 KDM5BQ9UGL1 1544 aa16.5■□□□□ 0.23
PCGF3-207ENST00000440452 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
PCGF3-207ENST00000440452 TCOF1Q13428 1488 aaKnown RBP16.49■□□□□ 0.23
PCGF3-207ENST00000440452 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
PCGF3-207ENST00000440452 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
PCGF3-207ENST00000440452 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
PCGF3-207ENST00000440452 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
PCGF3-207ENST00000440452 WDR62O43379 1518 aa16.48■□□□□ 0.23
PCGF3-207ENST00000440452 KIAA0586Q9BVV6 1533 aa16.48■□□□□ 0.23
PCGF3-207ENST00000440452 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
PCGF3-207ENST00000440452 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
PCGF3-207ENST00000440452 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
PCGF3-207ENST00000440452 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
PCGF3-207ENST00000440452 PLIN1O60240 522 aa16.45■□□□□ 0.22
PCGF3-207ENST00000440452 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
PCGF3-207ENST00000440452 DISP1Q96F81 1524 aa16.44■□□□□ 0.22
PCGF3-207ENST00000440452 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
PCGF3-207ENST00000440452 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
PCGF3-207ENST00000440452 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
PCGF3-207ENST00000440452 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
PCGF3-207ENST00000440452 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
PCGF3-207ENST00000440452 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
PCGF3-207ENST00000440452 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
PCGF3-207ENST00000440452 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
PCGF3-207ENST00000440452 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
PCGF3-207ENST00000440452 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
PCGF3-207ENST00000440452 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
PCGF3-207ENST00000440452 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
PCGF3-207ENST00000440452 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
PCGF3-207ENST00000440452 PZPP20742 1482 aa16.39■□□□□ 0.21
PCGF3-207ENST00000440452 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
PCGF3-207ENST00000440452 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms