RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 KIAA0556O60303 1618 aa21.49■■□□□ 1.03
APP-208ENST00000439274 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
APP-208ENST00000439274 FBLN2P98095 1184 aa21.46■■□□□ 1.03
APP-208ENST00000439274 HNRNPUQ00839 825 aaKnown RBP eCLIP21.46■■□□□ 1.03
APP-208ENST00000439274 CHD1O14646 1710 aa21.45■■□□□ 1.02
APP-208ENST00000439274 AKNAQ7Z591 1439 aa21.45■■□□□ 1.02
APP-208ENST00000439274 L3MBTL2Q969R5 705 aa21.44■■□□□ 1.02
APP-208ENST00000439274 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
APP-208ENST00000439274 EIF4G2P78344 907 aaKnown RBP eCLIP21.43■■□□□ 1.02
APP-208ENST00000439274 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.01
APP-208ENST00000439274 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
APP-208ENST00000439274 CCDC184Q52MB2 194 aa21.37■■□□□ 1.01
APP-208ENST00000439274 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
APP-208ENST00000439274 ANP32EQ9BTT0 268 aa21.36■■□□□ 1.01
APP-208ENST00000439274 DAPK1P53355 1430 aa21.36■■□□□ 1.01
APP-208ENST00000439274 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
APP-208ENST00000439274 CNTLNQ9NXG0 1405 aa21.35■■□□□ 1.01
APP-208ENST00000439274 NBPF8Q3BBV2 869 aa21.34■■□□□ 1.01
APP-208ENST00000439274 ABCC5O15440 1437 aa21.33■■□□□ 1.01
APP-208ENST00000439274 ANKRD30BQ9BXX2 1392 aa21.32■■□□□ 1
APP-208ENST00000439274 CCDC7Q96M83 1385 aa21.31■■□□□ 1
APP-208ENST00000439274 NCOA1Q15788 1441 aa21.3■■□□□ 1
APP-208ENST00000439274 ROCK1Q13464 1354 aa21.3■■□□□ 1
APP-208ENST00000439274 NUP153P49790 1475 aaKnown RBP21.29■■□□□ 1
APP-208ENST00000439274 RPRD2Q5VT52 1461 aaKnown RBP21.29■■□□□ 1
APP-208ENST00000439274 JPH4Q96JJ6 628 aa21.29■■□□□ 1
APP-208ENST00000439274 RAPGEF6Q8TEU7 1601 aa21.29■■□□□ 1
APP-208ENST00000439274 SLC4A1APQ9BWU0 796 aaKnown RBP21.28■■□□□ 1
APP-208ENST00000439274 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
APP-208ENST00000439274 TEX14Q8IWB6 1497 aa21.28■■□□□ 1
APP-208ENST00000439274 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
APP-208ENST00000439274 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
APP-208ENST00000439274 SHROOM2Q13796 1616 aa21.23■□□□□ 0.99
APP-208ENST00000439274 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
APP-208ENST00000439274 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
APP-208ENST00000439274 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
APP-208ENST00000439274 PLB1Q6P1J6 1458 aa21.22■□□□□ 0.99
APP-208ENST00000439274 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
APP-208ENST00000439274 SPATA31E1Q6ZUB1 1445 aa21.19■□□□□ 0.98
APP-208ENST00000439274 CDK11AQ9UQ88 783 aaPredicted RBP21.19■□□□□ 0.98
APP-208ENST00000439274 PZPP20742 1482 aa21.18■□□□□ 0.98
APP-208ENST00000439274 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
APP-208ENST00000439274 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
APP-208ENST00000439274 ABCA8O94911 1581 aa21.17■□□□□ 0.98
APP-208ENST00000439274 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
APP-208ENST00000439274 CAMSAP2Q08AD1 1489 aa21.16■□□□□ 0.98
APP-208ENST00000439274 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
APP-208ENST00000439274 CNGB1Q14028 1251 aaPredicted RBP21.14■□□□□ 0.98
APP-208ENST00000439274 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.97
APP-208ENST00000439274 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
APP-208ENST00000439274 KIF14Q15058 1648 aa21.11■□□□□ 0.97
APP-208ENST00000439274 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
APP-208ENST00000439274 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
APP-208ENST00000439274 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
APP-208ENST00000439274 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
APP-208ENST00000439274 MSH5O43196 834 aa21.09■□□□□ 0.97
APP-208ENST00000439274 PKD2Q13563 968 aa21.08■□□□□ 0.96
APP-208ENST00000439274 PPP4R2Q9NY27 417 aa21.07■□□□□ 0.96
APP-208ENST00000439274 MBD5Q9P267 1494 aa21.07■□□□□ 0.96
APP-208ENST00000439274 KIAA1107Q9UPP5 1409 aa21.07■□□□□ 0.96
APP-208ENST00000439274 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
APP-208ENST00000439274 ITSN2Q9NZM3 1697 aa21.06■□□□□ 0.96
APP-208ENST00000439274 USP47Q96K76 1375 aa21.05■□□□□ 0.96
APP-208ENST00000439274 BCORL1Q5H9F3 1711 aa21.04■□□□□ 0.96
APP-208ENST00000439274 DHX29Q7Z478 1369 aaKnown RBP21.04■□□□□ 0.96
APP-208ENST00000439274 ERICH6BQ5W0A0 696 aa21.04■□□□□ 0.96
APP-208ENST00000439274 PTPRGP23470 1445 aa21.03■□□□□ 0.96
APP-208ENST00000439274 B4GALNT3Q6L9W6 998 aa21.03■□□□□ 0.96
APP-208ENST00000439274 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
APP-208ENST00000439274 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
APP-208ENST00000439274 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
APP-208ENST00000439274 ANKRD30AQ9BXX3 1397 aa21.01■□□□□ 0.95
APP-208ENST00000439274 ATP10BO94823 1461 aa21.01■□□□□ 0.95
APP-208ENST00000439274 ANKRD50Q9ULJ7 1429 aa21■□□□□ 0.95
APP-208ENST00000439274 SENP3-EIF4A1A0A087X0R7 540 aa20.99■□□□□ 0.95
APP-208ENST00000439274 KDM5CP41229 1560 aa20.96■□□□□ 0.95
APP-208ENST00000439274 FANCIQ9NVI1 1328 aa20.96■□□□□ 0.95
APP-208ENST00000439274 NUP155O75694 1391 aa20.95■□□□□ 0.94
APP-208ENST00000439274 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
APP-208ENST00000439274 CDC42BPAQ5VT25 1732 aa20.92■□□□□ 0.94
APP-208ENST00000439274 C9orf84Q5VXU9 1444 aa20.92■□□□□ 0.94
APP-208ENST00000439274 KDM2AQ9Y2K7 1162 aa20.92■□□□□ 0.94
APP-208ENST00000439274 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
APP-208ENST00000439274 CARD11Q9BXL7 1154 aa20.91■□□□□ 0.94
APP-208ENST00000439274 SMG6Q86US8 1419 aaKnown RBP20.9■□□□□ 0.94
APP-208ENST00000439274 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.93
APP-208ENST00000439274 RALGAPBQ86X10 1494 aa20.89■□□□□ 0.93
APP-208ENST00000439274 UHRF1BP1Q6BDS2 1440 aa20.89■□□□□ 0.93
APP-208ENST00000439274 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■□□□□ 11.1
APP-208ENST00000439274 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
APP-208ENST00000439274 ARID4BQ4LE39 1312 aaPredicted RBP20.86■□□□□ 0.93
APP-208ENST00000439274 ST20-MTHFSA0A0A6YYL1 179 aa20.85■□□□□ 0.93
APP-208ENST00000439274 TSPY4P0CV99 314 aa20.85■□□□□ 0.93
APP-208ENST00000439274 TSPY10P0CW01 314 aa20.85■□□□□ 0.93
APP-208ENST00000439274 SHANK2Q9UPX8 1470 aa20.85■□□□□ 0.93
APP-208ENST00000439274 PNISRQ8TF01 805 aaKnown RBP20.85■□□□□ 0.93
APP-208ENST00000439274 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
APP-208ENST00000439274 KIF15Q9NS87 1388 aa20.84■□□□□ 0.93
APP-208ENST00000439274 TMC1Q8TDI8 760 aa20.83■□□□□ 0.93
APP-208ENST00000439274 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms