RNA–Protein interactions for RNA: ENST00000436663.1

PITPNB-204, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 2

Gene PITPNB, Length 590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-204ENST00000436663 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
PITPNB-204ENST00000436663 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
PITPNB-204ENST00000436663 HECW1Q76N89 1606 aa23.28■■□□□ 1.32
PITPNB-204ENST00000436663 UBAP1LF5GYI3 381 aa23.26■■□□□ 1.31
PITPNB-204ENST00000436663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
PITPNB-204ENST00000436663 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
PITPNB-204ENST00000436663 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
PITPNB-204ENST00000436663 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
PITPNB-204ENST00000436663 CFAP74Q9C0B2 1584 aa23.23■■□□□ 1.31
PITPNB-204ENST00000436663 ATP10AO60312 1499 aa23.22■■□□□ 1.31
PITPNB-204ENST00000436663 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
PITPNB-204ENST00000436663 NCOA1Q15788 1441 aa23.18■■□□□ 1.3
PITPNB-204ENST00000436663 C9orf84Q5VXU9 1444 aa23.18■■□□□ 1.3
PITPNB-204ENST00000436663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.17■■□□□ 1.3
PITPNB-204ENST00000436663 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
PITPNB-204ENST00000436663 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
PITPNB-204ENST00000436663 HSPA1LP34931 641 aa23.13■■□□□ 1.29
PITPNB-204ENST00000436663 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
PITPNB-204ENST00000436663 C3P01024 1663 aa23.12■■□□□ 1.29
PITPNB-204ENST00000436663 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
PITPNB-204ENST00000436663 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
PITPNB-204ENST00000436663 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
PITPNB-204ENST00000436663 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
PITPNB-204ENST00000436663 SAMD9Q5K651 1589 aa23.05■■□□□ 1.28
PITPNB-204ENST00000436663 NCKAP5LQ9HCH0 1330 aa23.04■■□□□ 1.28
PITPNB-204ENST00000436663 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
PITPNB-204ENST00000436663 PLCH2O75038 1416 aa23■■□□□ 1.27
PITPNB-204ENST00000436663 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
PITPNB-204ENST00000436663 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
PITPNB-204ENST00000436663 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
PITPNB-204ENST00000436663 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
PITPNB-204ENST00000436663 REREQ9P2R6 1566 aa22.92■■□□□ 1.26
PITPNB-204ENST00000436663 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
PITPNB-204ENST00000436663 ZNF518AQ6AHZ1 1483 aa22.9■■□□□ 1.26
PITPNB-204ENST00000436663 KDM5CP41229 1560 aa22.89■■□□□ 1.26
PITPNB-204ENST00000436663 EFCAB2Q5VUJ9 269 aa22.89■■□□□ 1.25
PITPNB-204ENST00000436663 AGLP35573 1532 aa22.88■■□□□ 1.25
PITPNB-204ENST00000436663 TOM1O60784 492 aa22.88■■□□□ 1.25
PITPNB-204ENST00000436663 PKD2Q13563 968 aa22.88■■□□□ 1.25
PITPNB-204ENST00000436663 NPATQ14207 1427 aa22.86■■□□□ 1.25
PITPNB-204ENST00000436663 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
PITPNB-204ENST00000436663 ABCA6Q8N139 1617 aa22.85■■□□□ 1.25
PITPNB-204ENST00000436663 PLA2R1Q13018 1463 aa22.85■■□□□ 1.25
PITPNB-204ENST00000436663 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
PITPNB-204ENST00000436663 CNTLNQ9NXG0 1405 aa22.83■■□□□ 1.25
PITPNB-204ENST00000436663 MYT1LQ9UL68 1186 aa22.83■■□□□ 1.25
PITPNB-204ENST00000436663 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
PITPNB-204ENST00000436663 MYO5CQ9NQX4 1742 aa22.8■■□□□ 1.24
PITPNB-204ENST00000436663 CDK13Q14004 1512 aaKnown RBP22.8■■□□□ 1.24
PITPNB-204ENST00000436663 MLH3Q9UHC1 1453 aa22.79■■□□□ 1.24
PITPNB-204ENST00000436663 ALKQ9UM73 1620 aa22.78■■□□□ 1.24
PITPNB-204ENST00000436663 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
PITPNB-204ENST00000436663 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
PITPNB-204ENST00000436663 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
PITPNB-204ENST00000436663 MROH2AA6NES4 1674 aa22.75■■□□□ 1.23
PITPNB-204ENST00000436663 CPS1P31327 1500 aa22.74■■□□□ 1.23
PITPNB-204ENST00000436663 MYO3AQ8NEV4 1616 aa22.74■■□□□ 1.23
PITPNB-204ENST00000436663 SUPT6HQ7KZ85 1726 aaKnown RBP22.74■■□□□ 1.23
PITPNB-204ENST00000436663 CEP170BQ9Y4F5 1589 aaPredicted RBP22.73■■□□□ 1.23
PITPNB-204ENST00000436663 SHANK2Q9UPX8 1470 aa22.7■■□□□ 1.22
PITPNB-204ENST00000436663 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
PITPNB-204ENST00000436663 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
PITPNB-204ENST00000436663 KIF14Q15058 1648 aa22.68■■□□□ 1.22
PITPNB-204ENST00000436663 KIDINS220Q9ULH0 1771 aa22.66■■□□□ 1.22
PITPNB-204ENST00000436663 POTEAQ6S8J7 498 aa22.63■■□□□ 1.21
PITPNB-204ENST00000436663 NEURL4Q96JN8 1562 aa22.61■■□□□ 1.21
PITPNB-204ENST00000436663 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
PITPNB-204ENST00000436663 DNMT1P26358 1616 aaKnown RBP22.59■■□□□ 1.21
PITPNB-204ENST00000436663 CDC42BPBQ9Y5S2 1711 aa22.59■■□□□ 1.21
PITPNB-204ENST00000436663 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
PITPNB-204ENST00000436663 SRCAPQ6ZRS2 3230 aa22.58■■□□□ 1.2
PITPNB-204ENST00000436663 ABCC1P33527 1531 aa22.57■■□□□ 1.2
PITPNB-204ENST00000436663 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
PITPNB-204ENST00000436663 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
PITPNB-204ENST00000436663 POLR1AO95602 1720 aaPredicted RBP22.56■■□□□ 1.2
PITPNB-204ENST00000436663 ITSN2Q9NZM3 1697 aa22.55■■□□□ 1.2
PITPNB-204ENST00000436663 CDK11AQ9UQ88 783 aaPredicted RBP22.53■■□□□ 1.2
PITPNB-204ENST00000436663 TROQ12816 1431 aaPredicted RBP22.53■■□□□ 1.2
PITPNB-204ENST00000436663 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
PITPNB-204ENST00000436663 SETD1AO15047 1707 aaKnown RBP22.5■■□□□ 1.19
PITPNB-204ENST00000436663 LRRC7Q96NW7 1537 aa22.47■■□□□ 1.19
PITPNB-204ENST00000436663 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
PITPNB-204ENST00000436663 PREX2Q70Z35 1606 aa22.46■■□□□ 1.19
PITPNB-204ENST00000436663 STRCP1A6NGW2 1772 aa22.45■■□□□ 1.19
PITPNB-204ENST00000436663 GGT6Q6P531 493 aa22.44■■□□□ 1.18
PITPNB-204ENST00000436663 RNF17Q9BXT8 1623 aaKnown RBP22.43■■□□□ 1.18
PITPNB-204ENST00000436663 PLXNC1O60486 1568 aa22.43■■□□□ 1.18
PITPNB-204ENST00000436663 CLIP1P30622 1438 aa22.43■■□□□ 1.18
PITPNB-204ENST00000436663 ANKLE2Q86XL3 938 aa22.43■■□□□ 1.18
PITPNB-204ENST00000436663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.41■■□□□ 1.18
PITPNB-204ENST00000436663 MED14O60244 1454 aa22.41■■□□□ 1.18
PITPNB-204ENST00000436663 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
PITPNB-204ENST00000436663 EEA1Q15075 1411 aa22.4■■□□□ 1.18
PITPNB-204ENST00000436663 SPAG9O60271 1321 aaKnown RBP22.39■■□□□ 1.18
PITPNB-204ENST00000436663 FBXO31Q5XUX0 539 aaPredicted RBP22.38■■□□□ 1.17
PITPNB-204ENST00000436663 A2MP01023 1474 aa22.38■■□□□ 1.17
PITPNB-204ENST00000436663 UPF1Q92900 1129 aaKnown RBP eCLIP22.37■■□□□ 1.17
PITPNB-204ENST00000436663 FMN1Q68DA7 1419 aa22.36■■□□□ 1.17
PITPNB-204ENST00000436663 TNRQ92752 1358 aa22.36■■□□□ 1.17
PITPNB-204ENST00000436663 DEPDC5O75140 1603 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms