RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
HMGCS1-202ENST00000433297 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
HMGCS1-202ENST00000433297 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
HMGCS1-202ENST00000433297 DAXXQ9UER7 740 aaPredicted RBP15.38■□□□□ 0.05
HMGCS1-202ENST00000433297 CFTRP13569 1480 aa15.38■□□□□ 0.05
HMGCS1-202ENST00000433297 BACH2Q9BYV9 841 aa15.37■□□□□ 0.05
HMGCS1-202ENST00000433297 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-202ENST00000433297 MYOM3Q5VTT5 1437 aa15.36■□□□□ 0.05
HMGCS1-202ENST00000433297 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-202ENST00000433297 GSE1Q14687 1217 aa15.36■□□□□ 0.05
HMGCS1-202ENST00000433297 PNISRQ8TF01 805 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-202ENST00000433297 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
HMGCS1-202ENST00000433297 PLIN1O60240 522 aa15.34■□□□□ 0.05
HMGCS1-202ENST00000433297 WASHC2CQ9Y4E1 1318 aa15.32■□□□□ 0.04
HMGCS1-202ENST00000433297 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
HMGCS1-202ENST00000433297 FRAT1Q92837 279 aaPredicted RBP15.31■□□□□ 0.04
HMGCS1-202ENST00000433297 DENND4BO75064 1496 aaPredicted RBP15.31■□□□□ 0.04
HMGCS1-202ENST00000433297 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
HMGCS1-202ENST00000433297 DDRGK1Q96HY6 314 aa15.29■□□□□ 0.04
HMGCS1-202ENST00000433297 DHX29Q7Z478 1369 aaKnown RBP15.28■□□□□ 0.04
HMGCS1-202ENST00000433297 UBE2Q2Q8WVN8 375 aa15.27■□□□□ 0.04
HMGCS1-202ENST00000433297 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
HMGCS1-202ENST00000433297 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.03
HMGCS1-202ENST00000433297 MS4A1P11836 297 aa15.27■□□□□ 0.03
HMGCS1-202ENST00000433297 USP47Q96K76 1375 aa15.25■□□□□ 0.03
HMGCS1-202ENST00000433297 KDM6BO15054 1643 aa15.25■□□□□ 0.03
HMGCS1-202ENST00000433297 SPATA31E1Q6ZUB1 1445 aa15.24■□□□□ 0.03
HMGCS1-202ENST00000433297 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
HMGCS1-202ENST00000433297 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
HMGCS1-202ENST00000433297 CRBNQ96SW2 442 aa15.23■□□□□ 0.03
HMGCS1-202ENST00000433297 EFCAB5A4FU69 1503 aa15.23■□□□□ 0.03
HMGCS1-202ENST00000433297 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
HMGCS1-202ENST00000433297 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
HMGCS1-202ENST00000433297 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.03
HMGCS1-202ENST00000433297 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-202ENST00000433297 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-202ENST00000433297 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
HMGCS1-202ENST00000433297 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-202ENST00000433297 MYBBP1AQ9BQG0 1328 aaKnown RBP15.18■□□□□ 0.02
HMGCS1-202ENST00000433297 ST20-MTHFSA0A0A6YYL1 179 aa15.18■□□□□ 0.02
HMGCS1-202ENST00000433297 RGS3P49796 1198 aa15.18■□□□□ 0.02
HMGCS1-202ENST00000433297 ARXQ96QS3 562 aa15.17■□□□□ 0.02
HMGCS1-202ENST00000433297 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
HMGCS1-202ENST00000433297 C20orf194Q5TEA3 1177 aa15.16■□□□□ 0.02
HMGCS1-202ENST00000433297 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
HMGCS1-202ENST00000433297 KIF15Q9NS87 1388 aa15.16■□□□□ 0.02
HMGCS1-202ENST00000433297 TEX14Q8IWB6 1497 aa15.15■□□□□ 0.02
HMGCS1-202ENST00000433297 PKD2Q13563 968 aa15.14■□□□□ 0.01
HMGCS1-202ENST00000433297 RALBP1Q15311 655 aa15.14■□□□□ 0.01
HMGCS1-202ENST00000433297 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
HMGCS1-202ENST00000433297 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
HMGCS1-202ENST00000433297 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
HMGCS1-202ENST00000433297 MIA2Q96PC5 1412 aa15.13■□□□□ 0.01
HMGCS1-202ENST00000433297 EHBP1L1Q8N3D4 1523 aa15.13■□□□□ 0.01
HMGCS1-202ENST00000433297 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
HMGCS1-202ENST00000433297 UGGT2Q9NYU1 1516 aa15.12■□□□□ 0.01
HMGCS1-202ENST00000433297 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
HMGCS1-202ENST00000433297 BRD4O60885 1362 aaPredicted RBP15.12■□□□□ 0.01
HMGCS1-202ENST00000433297 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
HMGCS1-202ENST00000433297 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
HMGCS1-202ENST00000433297 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
HMGCS1-202ENST00000433297 NLRP13Q86W25 1043 aa15.11■□□□□ 0.01
HMGCS1-202ENST00000433297 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
HMGCS1-202ENST00000433297 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
HMGCS1-202ENST00000433297 ROCK2O75116 1388 aaKnown RBP15.09■□□□□ 0.01
HMGCS1-202ENST00000433297 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0
HMGCS1-202ENST00000433297 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
HMGCS1-202ENST00000433297 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
HMGCS1-202ENST00000433297 GCC2Q8IWJ2 1684 aa15.07■□□□□ 0
HMGCS1-202ENST00000433297 LRRIQ1Q96JM4 1722 aa15.07■□□□□ 0
HMGCS1-202ENST00000433297 FAM43AQ8N2R8 423 aa15.07■□□□□ 0
HMGCS1-202ENST00000433297 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
HMGCS1-202ENST00000433297 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
HMGCS1-202ENST00000433297 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
HMGCS1-202ENST00000433297 KTN1Q86UP2 1357 aaKnown RBP15.05■□□□□ 0
HMGCS1-202ENST00000433297 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
HMGCS1-202ENST00000433297 C8orf34Q49A92 452 aa15.05■□□□□ -0
HMGCS1-202ENST00000433297 POGKQ9P215 609 aa15.05■□□□□ -0
HMGCS1-202ENST00000433297 DAPK1P53355 1430 aa15.04■□□□□ -0
HMGCS1-202ENST00000433297 ABCA10Q8WWZ4 1543 aa15.04■□□□□ -0
HMGCS1-202ENST00000433297 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
HMGCS1-202ENST00000433297 CDK13Q14004 1512 aaKnown RBP15.03■□□□□ -0
HMGCS1-202ENST00000433297 CTTNBP2Q8WZ74 1663 aa15.03■□□□□ -0
HMGCS1-202ENST00000433297 ABCC5O15440 1437 aa15.02□□□□□ -0.01
HMGCS1-202ENST00000433297 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
HMGCS1-202ENST00000433297 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
HMGCS1-202ENST00000433297 ARHGEF11O15085 1522 aa15□□□□□ -0.01
HMGCS1-202ENST00000433297 KDM2BQ8NHM5 1336 aa14.99□□□□□ -0.01
HMGCS1-202ENST00000433297 EPRSP07814 1512 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-202ENST00000433297 RRAGDQ9NQL2 400 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-202ENST00000433297 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
HMGCS1-202ENST00000433297 NAP1L5Q96NT1 182 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-202ENST00000433297 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
HMGCS1-202ENST00000433297 POLR1AO95602 1720 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-202ENST00000433297 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
HMGCS1-202ENST00000433297 CUL7Q14999 1698 aa14.97□□□□□ -0.01
HMGCS1-202ENST00000433297 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
HMGCS1-202ENST00000433297 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
HMGCS1-202ENST00000433297 PANK3Q9H999 370 aa14.96□□□□□ -0.01
HMGCS1-202ENST00000433297 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms