RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
CTDSP1-203ENST00000431127 SCAPERQ9BY12 1400 aa27.39■■□□□ 1.97
CTDSP1-203ENST00000431127 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
CTDSP1-203ENST00000431127 PREX2Q70Z35 1606 aa27.38■■□□□ 1.97
CTDSP1-203ENST00000431127 CCNB3Q8WWL7 1395 aa27.37■■□□□ 1.97
CTDSP1-203ENST00000431127 APLP2Q06481 763 aa27.36■■□□□ 1.97
CTDSP1-203ENST00000431127 GPATCH8Q9UKJ3 1502 aaKnown RBP27.36■■□□□ 1.97
CTDSP1-203ENST00000431127 CDC42BPBQ9Y5S2 1711 aa27.34■■□□□ 1.97
CTDSP1-203ENST00000431127 FRMPD1Q5SYB0 1578 aa27.34■■□□□ 1.97
CTDSP1-203ENST00000431127 CFDP1Q9UEE9 299 aaPredicted RBP27.32■■□□□ 1.96
CTDSP1-203ENST00000431127 CDC42BPAQ5VT25 1732 aa27.32■■□□□ 1.96
CTDSP1-203ENST00000431127 POGZQ7Z3K3 1410 aa27.32■■□□□ 1.96
CTDSP1-203ENST00000431127 LRRC9Q6ZRR7 1453 aa27.32■■□□□ 1.96
CTDSP1-203ENST00000431127 RICTORQ6R327 1708 aa27.31■■□□□ 1.96
CTDSP1-203ENST00000431127 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
CTDSP1-203ENST00000431127 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
CTDSP1-203ENST00000431127 ZMYM4Q5VZL5 1548 aa27.26■■□□□ 1.96
CTDSP1-203ENST00000431127 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
CTDSP1-203ENST00000431127 ZNF518AQ6AHZ1 1483 aa27.26■■□□□ 1.95
CTDSP1-203ENST00000431127 MAGI2Q86UL8 1455 aa27.26■■□□□ 1.95
CTDSP1-203ENST00000431127 KANK4Q5T7N3 995 aaPredicted RBP27.25■■□□□ 1.95
CTDSP1-203ENST00000431127 ABCC1P33527 1531 aa27.23■■□□□ 1.95
CTDSP1-203ENST00000431127 PLEKHH2Q8IVE3 1493 aa27.22■■□□□ 1.95
CTDSP1-203ENST00000431127 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
CTDSP1-203ENST00000431127 ITSN2Q9NZM3 1697 aa27.21■■□□□ 1.95
CTDSP1-203ENST00000431127 KIAA1107Q9UPP5 1409 aa27.2■■□□□ 1.94
CTDSP1-203ENST00000431127 ZFYVE16Q7Z3T8 1539 aa27.19■■□□□ 1.94
CTDSP1-203ENST00000431127 ARHGEF40Q8TER5 1519 aa27.19■■□□□ 1.94
CTDSP1-203ENST00000431127 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
CTDSP1-203ENST00000431127 ARHGEF12Q9NZN5 1544 aa27.18■■□□□ 1.94
CTDSP1-203ENST00000431127 KDM5CP41229 1560 aa27.17■■□□□ 1.94
CTDSP1-203ENST00000431127 TRAPPC8Q9Y2L5 1435 aa27.16■■□□□ 1.94
CTDSP1-203ENST00000431127 YEATS2Q9ULM3 1422 aa27.15■■□□□ 1.94
CTDSP1-203ENST00000431127 HNRNPMP52272 730 aaKnown RBP eCLIP27.14■■□□□ 1.94
CTDSP1-203ENST00000431127 MYT1LQ9UL68 1186 aa27.14■■□□□ 1.94
CTDSP1-203ENST00000431127 SYCP2Q9BX26 1530 aa27.13■■□□□ 1.93
CTDSP1-203ENST00000431127 ARID4BQ4LE39 1312 aaPredicted RBP27.12■■□□□ 1.93
CTDSP1-203ENST00000431127 MLH3Q9UHC1 1453 aa27.12■■□□□ 1.93
CTDSP1-203ENST00000431127 ZNF644Q9H582 1327 aaPredicted RBP27.11■■□□□ 1.93
CTDSP1-203ENST00000431127 HECW2Q9P2P5 1572 aa27.1■■□□□ 1.93
CTDSP1-203ENST00000431127 ATP10AO60312 1499 aa27.1■■□□□ 1.93
CTDSP1-203ENST00000431127 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
CTDSP1-203ENST00000431127 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
CTDSP1-203ENST00000431127 RSPH4AQ5TD94 716 aa27.05■■□□□ 1.92
CTDSP1-203ENST00000431127 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
CTDSP1-203ENST00000431127 MIA2Q96PC5 1412 aa27.05■■□□□ 1.92
CTDSP1-203ENST00000431127 CAMSAP2Q08AD1 1489 aa27.04■■□□□ 1.92
CTDSP1-203ENST00000431127 MBD5Q9P267 1494 aa27.03■■□□□ 1.92
CTDSP1-203ENST00000431127 ADAMTSL3P82987 1691 aa27.02■■□□□ 1.92
CTDSP1-203ENST00000431127 PTPRMP28827 1452 aa27.01■■□□□ 1.91
CTDSP1-203ENST00000431127 ILDR1Q86SU0 546 aaPredicted RBP27.01■■□□□ 1.91
CTDSP1-203ENST00000431127 DIP2CQ9Y2E4 1556 aa26.98■■□□□ 1.91
CTDSP1-203ENST00000431127 KIDINS220Q9ULH0 1771 aa26.97■■□□□ 1.91
CTDSP1-203ENST00000431127 CCDC141Q6ZP82 1450 aa26.96■■□□□ 1.91
CTDSP1-203ENST00000431127 REREQ9P2R6 1566 aa26.96■■□□□ 1.91
CTDSP1-203ENST00000431127 ABCA6Q8N139 1617 aa26.95■■□□□ 1.91
CTDSP1-203ENST00000431127 BCORL1Q5H9F3 1711 aa26.95■■□□□ 1.9
CTDSP1-203ENST00000431127 ATP7AQ04656 1500 aa26.95■■□□□ 1.9
CTDSP1-203ENST00000431127 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
CTDSP1-203ENST00000431127 ARHGEF5Q12774 1597 aa26.92■■□□□ 1.9
CTDSP1-203ENST00000431127 INO80Q9ULG1 1556 aaPredicted RBP26.92■■□□□ 1.9
CTDSP1-203ENST00000431127 TSPY4P0CV99 314 aa26.92■■□□□ 1.9
CTDSP1-203ENST00000431127 TSPY10P0CW01 314 aa26.92■■□□□ 1.9
CTDSP1-203ENST00000431127 SIGLEC1Q9BZZ2 1709 aa26.9■■□□□ 1.9
CTDSP1-203ENST00000431127 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
CTDSP1-203ENST00000431127 MLECQ14165 292 aa26.89■■□□□ 1.9
CTDSP1-203ENST00000431127 AGLP35573 1532 aa26.89■■□□□ 1.89
CTDSP1-203ENST00000431127 MADDQ8WXG6 1647 aa26.87■■□□□ 1.89
CTDSP1-203ENST00000431127 PTPN23Q9H3S7 1636 aa26.85■■□□□ 1.89
CTDSP1-203ENST00000431127 A2MP01023 1474 aa26.84■■□□□ 1.89
CTDSP1-203ENST00000431127 TCOF1Q13428 1488 aaKnown RBP26.83■■□□□ 1.89
CTDSP1-203ENST00000431127 ADGBQ8N7X0 1667 aa26.79■■□□□ 1.88
CTDSP1-203ENST00000431127 DHX29Q7Z478 1369 aaKnown RBP26.78■■□□□ 1.88
CTDSP1-203ENST00000431127 PLXNC1O60486 1568 aa26.78■■□□□ 1.88
CTDSP1-203ENST00000431127 MAST1Q9Y2H9 1570 aa26.77■■□□□ 1.88
CTDSP1-203ENST00000431127 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
CTDSP1-203ENST00000431127 RIMS1Q86UR5 1692 aaKnown RBP26.76■■□□□ 1.87
CTDSP1-203ENST00000431127 ABCC5O15440 1437 aa26.75■■□□□ 1.87
CTDSP1-203ENST00000431127 PPARGC1BQ86YN6 1023 aaKnown RBP26.75■■□□□ 1.87
CTDSP1-203ENST00000431127 ESF1Q9H501 851 aaKnown RBP26.75■■□□□ 1.87
CTDSP1-203ENST00000431127 FAM50AQ14320 339 aaKnown RBP26.74■■□□□ 1.87
CTDSP1-203ENST00000431127 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
CTDSP1-203ENST00000431127 SHANK2Q9UPX8 1470 aa26.73■■□□□ 1.87
CTDSP1-203ENST00000431127 DAPK1P53355 1430 aa26.73■■□□□ 1.87
CTDSP1-203ENST00000431127 LMTK3Q96Q04 1460 aa26.72■■□□□ 1.87
CTDSP1-203ENST00000431127 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
CTDSP1-203ENST00000431127 PPP6R1Q9UPN7 881 aa26.7■■□□□ 1.86
CTDSP1-203ENST00000431127 CNTLNQ9NXG0 1405 aa26.68■■□□□ 1.86
CTDSP1-203ENST00000431127 GGT6Q6P531 493 aa26.68■■□□□ 1.86
CTDSP1-203ENST00000431127 HSPA2P54652 639 aa26.67■■□□□ 1.86
CTDSP1-203ENST00000431127 KIF3BO15066 747 aa26.66■■□□□ 1.86
CTDSP1-203ENST00000431127 CROCC2H7BZ55 1655 aa26.66■■□□□ 1.86
CTDSP1-203ENST00000431127 ANKRD30AQ9BXX3 1397 aa26.63■■□□□ 1.85
CTDSP1-203ENST00000431127 KIF15Q9NS87 1388 aa26.62■■□□□ 1.85
CTDSP1-203ENST00000431127 CEBPAP49715 358 aaPredicted RBP26.62■■□□□ 1.85
CTDSP1-203ENST00000431127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.61■■□□□ 1.852e-8■■■■■ 33.3
CTDSP1-203ENST00000431127 DUOX2Q9NRD8 1548 aa26.61■■□□□ 1.85
CTDSP1-203ENST00000431127 FBXO41Q8TF61 875 aa26.61■■□□□ 1.85
CTDSP1-203ENST00000431127 RRP7BPQ9NSQ0 103 aa26.61■■□□□ 1.85
CTDSP1-203ENST00000431127 CHIC2Q9UKJ5 165 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms