RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-206ENST00000429440 MS4A1P11836 297 aa11.72□□□□□ -0.53
CDC42BPA-206ENST00000429440 EFCAB5A4FU69 1503 aa11.71□□□□□ -0.53
CDC42BPA-206ENST00000429440 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
CDC42BPA-206ENST00000429440 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
CDC42BPA-206ENST00000429440 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-206ENST00000429440 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-206ENST00000429440 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
CDC42BPA-206ENST00000429440 FHOD3Q2V2M9 1422 aa11.7□□□□□ -0.54
CDC42BPA-206ENST00000429440 RGS3P49796 1198 aa11.7□□□□□ -0.54
CDC42BPA-206ENST00000429440 FHAD1B1AJZ9 1412 aa11.7□□□□□ -0.54
CDC42BPA-206ENST00000429440 PDE4AP27815 886 aa11.69□□□□□ -0.54
CDC42BPA-206ENST00000429440 TPM2P07951 284 aa11.69□□□□□ -0.54
CDC42BPA-206ENST00000429440 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-206ENST00000429440 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
CDC42BPA-206ENST00000429440 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-206ENST00000429440 PHLDB1Q86UU1 1377 aa11.69□□□□□ -0.54
CDC42BPA-206ENST00000429440 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-206ENST00000429440 DNAJC5Q9H3Z4 198 aa11.68□□□□□ -0.54
CDC42BPA-206ENST00000429440 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 ARXQ96QS3 562 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 MAPKBP1O60336 1514 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■■■ 39.8
CDC42BPA-206ENST00000429440 GAPVD1Q14C86 1478 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 FYCO1Q9BQS8 1478 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 SAMD9Q5K651 1589 aa11.67□□□□□ -0.54
CDC42BPA-206ENST00000429440 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-206ENST00000429440 P3H3Q8IVL6 736 aa11.66□□□□□ -0.54
CDC42BPA-206ENST00000429440 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
CDC42BPA-206ENST00000429440 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
CDC42BPA-206ENST00000429440 LRRIQ1Q96JM4 1722 aa11.65□□□□□ -0.54
CDC42BPA-206ENST00000429440 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-206ENST00000429440 IPO4Q8TEX9 1081 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-206ENST00000429440 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-206ENST00000429440 SIN3AQ96ST3 1273 aa11.63□□□□□ -0.55
CDC42BPA-206ENST00000429440 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-206ENST00000429440 SMAP1Q8IYB5 467 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-206ENST00000429440 MAP7D2Q96T17 732 aa11.62□□□□□ -0.55
CDC42BPA-206ENST00000429440 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
CDC42BPA-206ENST00000429440 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
CDC42BPA-206ENST00000429440 FRAT2O75474 233 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-206ENST00000429440 PBRM1Q86U86 1689 aa11.6□□□□□ -0.55
CDC42BPA-206ENST00000429440 CNGB1Q14028 1251 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-206ENST00000429440 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
CDC42BPA-206ENST00000429440 GRIN2BQ13224 1484 aa11.58□□□□□ -0.56
CDC42BPA-206ENST00000429440 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-206ENST00000429440 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-206ENST00000429440 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-206ENST00000429440 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
CDC42BPA-206ENST00000429440 ADAMTS12P58397 1594 aa11.56□□□□□ -0.56
CDC42BPA-206ENST00000429440 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
CDC42BPA-206ENST00000429440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDC42BPA-206ENST00000429440 NUDCQ9Y266 331 aa11.55□□□□□ -0.56
CDC42BPA-206ENST00000429440 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
CDC42BPA-206ENST00000429440 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-206ENST00000429440 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-206ENST00000429440 TERF1P54274 439 aa11.54□□□□□ -0.56
CDC42BPA-206ENST00000429440 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-206ENST00000429440 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
CDC42BPA-206ENST00000429440 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
CDC42BPA-206ENST00000429440 XRCC6P12956 609 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDC42BPA-206ENST00000429440 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-206ENST00000429440 HIRIP3Q9BW71 556 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPA-206ENST00000429440 POGKQ9P215 609 aa11.52□□□□□ -0.57
CDC42BPA-206ENST00000429440 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
CDC42BPA-206ENST00000429440 ESPNB1AK53 854 aa11.51□□□□□ -0.57
CDC42BPA-206ENST00000429440 MTERF4Q7Z6M4 381 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-206ENST00000429440 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
CDC42BPA-206ENST00000429440 WDR62O43379 1518 aa11.5□□□□□ -0.57
CDC42BPA-206ENST00000429440 IQGAP2Q13576 1575 aa11.5□□□□□ -0.57
CDC42BPA-206ENST00000429440 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
CDC42BPA-206ENST00000429440 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-206ENST00000429440 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
CDC42BPA-206ENST00000429440 BRD2P25440 801 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-206ENST00000429440 GOLGA6L3A6NEY3 463 aa11.48□□□□□ -0.57
CDC42BPA-206ENST00000429440 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
CDC42BPA-206ENST00000429440 DMTNQ08495 405 aa11.48□□□□□ -0.57
CDC42BPA-206ENST00000429440 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
CDC42BPA-206ENST00000429440 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
CDC42BPA-206ENST00000429440 SUPT6HQ7KZ85 1726 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-206ENST00000429440 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
CDC42BPA-206ENST00000429440 FTSJ3Q8IY81 847 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-206ENST00000429440 FAM9BQ8IZU0 186 aa11.46□□□□□ -0.57
CDC42BPA-206ENST00000429440 TMEM51Q9NW97 253 aa11.46□□□□□ -0.57
CDC42BPA-206ENST00000429440 MYOM3Q5VTT5 1437 aa11.46□□□□□ -0.57
CDC42BPA-206ENST00000429440 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
CDC42BPA-206ENST00000429440 CCDC184Q52MB2 194 aa11.46□□□□□ -0.58
CDC42BPA-206ENST00000429440 KIF20AO95235 890 aa11.45□□□□□ -0.58
CDC42BPA-206ENST00000429440 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
CDC42BPA-206ENST00000429440 PRKRIP1Q9H875 184 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-206ENST00000429440 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
CDC42BPA-206ENST00000429440 ARID4BQ4LE39 1312 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 MRE11P49959 708 aa11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 ISY1Q9ULR0 285 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms