RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
RHBDF1-204ENST00000428730 DHX29Q7Z478 1369 aaKnown RBP21.98■■□□□ 1.11
RHBDF1-204ENST00000428730 HMGXB3Q12766 1538 aa21.98■■□□□ 1.11
RHBDF1-204ENST00000428730 USP35Q9P2H5 1018 aa21.97■■□□□ 1.11
RHBDF1-204ENST00000428730 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
RHBDF1-204ENST00000428730 SPATA31E1Q6ZUB1 1445 aa21.96■■□□□ 1.11
RHBDF1-204ENST00000428730 SKAP1Q86WV1 359 aa21.96■■□□□ 1.11
RHBDF1-204ENST00000428730 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
RHBDF1-204ENST00000428730 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
RHBDF1-204ENST00000428730 TCERG1O14776 1098 aaKnown RBP21.93■■□□□ 1.1
RHBDF1-204ENST00000428730 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
RHBDF1-204ENST00000428730 PNISRQ8TF01 805 aaKnown RBP21.92■■□□□ 1.1
RHBDF1-204ENST00000428730 LRRIQ1Q96JM4 1722 aa21.9■■□□□ 1.1
RHBDF1-204ENST00000428730 UBE2Q2Q8WVN8 375 aa21.9■■□□□ 1.1
RHBDF1-204ENST00000428730 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
RHBDF1-204ENST00000428730 EIF5BO60841 1220 aaKnown RBP21.89■■□□□ 1.09
RHBDF1-204ENST00000428730 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
RHBDF1-204ENST00000428730 TEX14Q8IWB6 1497 aa21.88■■□□□ 1.09
RHBDF1-204ENST00000428730 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
RHBDF1-204ENST00000428730 SLC4A3P48751 1232 aa21.87■■□□□ 1.09
RHBDF1-204ENST00000428730 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
RHBDF1-204ENST00000428730 GSE1Q14687 1217 aa21.86■■□□□ 1.09
RHBDF1-204ENST00000428730 ANKRD30BQ9BXX2 1392 aa21.86■■□□□ 1.09
RHBDF1-204ENST00000428730 ZNF326Q5BKZ1 582 aaKnown RBP21.85■■□□□ 1.09
RHBDF1-204ENST00000428730 GCC2Q8IWJ2 1684 aa21.85■■□□□ 1.09
RHBDF1-204ENST00000428730 RPRD2Q5VT52 1461 aaKnown RBP21.84■■□□□ 1.09
RHBDF1-204ENST00000428730 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
RHBDF1-204ENST00000428730 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.09
RHBDF1-204ENST00000428730 FRAT1Q92837 279 aaPredicted RBP21.82■■□□□ 1.08
RHBDF1-204ENST00000428730 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
RHBDF1-204ENST00000428730 NFKBIBQ15653 356 aa21.82■■□□□ 1.08
RHBDF1-204ENST00000428730 RCAN3Q9UKA8 241 aa21.82■■□□□ 1.08
RHBDF1-204ENST00000428730 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
RHBDF1-204ENST00000428730 POLR1AO95602 1720 aaPredicted RBP21.8■■□□□ 1.08
RHBDF1-204ENST00000428730 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
RHBDF1-204ENST00000428730 MS4A1P11836 297 aa21.79■■□□□ 1.08
RHBDF1-204ENST00000428730 BCORL1Q5H9F3 1711 aa21.79■■□□□ 1.08
RHBDF1-204ENST00000428730 PLIN1O60240 522 aa21.78■■□□□ 1.08
RHBDF1-204ENST00000428730 USP47Q96K76 1375 aa21.78■■□□□ 1.08
RHBDF1-204ENST00000428730 CTTNBP2Q8WZ74 1663 aa21.77■■□□□ 1.08
RHBDF1-204ENST00000428730 ARID3CA6NKF2 412 aa21.77■■□□□ 1.08
RHBDF1-204ENST00000428730 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
RHBDF1-204ENST00000428730 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
RHBDF1-204ENST00000428730 TCOF1Q13428 1488 aaKnown RBP21.76■■□□□ 1.07
RHBDF1-204ENST00000428730 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
RHBDF1-204ENST00000428730 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
RHBDF1-204ENST00000428730 MIA2Q96PC5 1412 aa21.74■■□□□ 1.07
RHBDF1-204ENST00000428730 LRPPRCP42704 1394 aaKnown RBP21.73■■□□□ 1.07
RHBDF1-204ENST00000428730 CDCA7LQ96GN5 454 aa21.73■■□□□ 1.07
RHBDF1-204ENST00000428730 DDRGK1Q96HY6 314 aa21.72■■□□□ 1.07
RHBDF1-204ENST00000428730 CRBNQ96SW2 442 aa21.68■■□□□ 1.06
RHBDF1-204ENST00000428730 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
RHBDF1-204ENST00000428730 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
RHBDF1-204ENST00000428730 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
RHBDF1-204ENST00000428730 FRAT2O75474 233 aaPredicted RBP21.65■■□□□ 1.06
RHBDF1-204ENST00000428730 MYBBP1AQ9BQG0 1328 aaKnown RBP21.65■■□□□ 1.06
RHBDF1-204ENST00000428730 DCAF11Q8TEB1 546 aa21.65■■□□□ 1.06
RHBDF1-204ENST00000428730 KIF15Q9NS87 1388 aa21.63■■□□□ 1.05
RHBDF1-204ENST00000428730 CUL7Q14999 1698 aa21.63■■□□□ 1.05
RHBDF1-204ENST00000428730 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
RHBDF1-204ENST00000428730 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
RHBDF1-204ENST00000428730 BRD4O60885 1362 aaPredicted RBP21.63■■□□□ 1.05
RHBDF1-204ENST00000428730 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
RHBDF1-204ENST00000428730 ZNF644Q9H582 1327 aaPredicted RBP21.62■■□□□ 1.05
RHBDF1-204ENST00000428730 C20orf194Q5TEA3 1177 aa21.61■■□□□ 1.05
RHBDF1-204ENST00000428730 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
RHBDF1-204ENST00000428730 MBD5Q9P267 1494 aa21.6■■□□□ 1.05
RHBDF1-204ENST00000428730 KDM5CP41229 1560 aa21.59■■□□□ 1.05
RHBDF1-204ENST00000428730 DAPK1P53355 1430 aa21.58■■□□□ 1.05
RHBDF1-204ENST00000428730 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.05
RHBDF1-204ENST00000428730 CARD11Q9BXL7 1154 aa21.56■■□□□ 1.04
RHBDF1-204ENST00000428730 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
RHBDF1-204ENST00000428730 ARID4BQ4LE39 1312 aaPredicted RBP21.56■■□□□ 1.04
RHBDF1-204ENST00000428730 ABCC5O15440 1437 aa21.55■■□□□ 1.04
RHBDF1-204ENST00000428730 ROCK2O75116 1388 aaKnown RBP21.55■■□□□ 1.04
RHBDF1-204ENST00000428730 RALBP1Q15311 655 aa21.55■■□□□ 1.04
RHBDF1-204ENST00000428730 PZPP20742 1482 aa21.55■■□□□ 1.04
RHBDF1-204ENST00000428730 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
RHBDF1-204ENST00000428730 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
RHBDF1-204ENST00000428730 PDE3BQ13370 1112 aa21.53■■□□□ 1.04
RHBDF1-204ENST00000428730 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
RHBDF1-204ENST00000428730 FAM43AQ8N2R8 423 aa21.53■■□□□ 1.04
RHBDF1-204ENST00000428730 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
RHBDF1-204ENST00000428730 ROCK1Q13464 1354 aa21.52■■□□□ 1.04
RHBDF1-204ENST00000428730 RSPH6AQ9H0K4 717 aa21.52■■□□□ 1.04
RHBDF1-204ENST00000428730 EPRSP07814 1512 aaKnown RBP21.52■■□□□ 1.04
RHBDF1-204ENST00000428730 KDM2BQ8NHM5 1336 aa21.51■■□□□ 1.03
RHBDF1-204ENST00000428730 PKD2Q13563 968 aa21.5■■□□□ 1.03
RHBDF1-204ENST00000428730 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
RHBDF1-204ENST00000428730 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
RHBDF1-204ENST00000428730 KIF14Q15058 1648 aa21.5■■□□□ 1.03
RHBDF1-204ENST00000428730 FAM161AQ3B820 660 aa21.48■■□□□ 1.03
RHBDF1-204ENST00000428730 RGS3P49796 1198 aa21.48■■□□□ 1.03
RHBDF1-204ENST00000428730 NESP48681 1621 aa21.47■■□□□ 1.03
RHBDF1-204ENST00000428730 POGKQ9P215 609 aa21.46■■□□□ 1.03
RHBDF1-204ENST00000428730 KTN1Q86UP2 1357 aaKnown RBP21.46■■□□□ 1.03
RHBDF1-204ENST00000428730 KIAA1107Q9UPP5 1409 aa21.45■■□□□ 1.02
RHBDF1-204ENST00000428730 RRAGDQ9NQL2 400 aaPredicted RBP21.44■■□□□ 1.02
RHBDF1-204ENST00000428730 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
RHBDF1-204ENST00000428730 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms