RNA–Protein interactions for RNA: ENST00000426687.2

SHANK2-208, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-208ENST00000426687 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
SHANK2-208ENST00000426687 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
SHANK2-208ENST00000426687 C9orf84Q5VXU9 1444 aa15.55■□□□□ 0.08
SHANK2-208ENST00000426687 ARID3CA6NKF2 412 aa15.55■□□□□ 0.08
SHANK2-208ENST00000426687 HSPA1LP34931 641 aa15.55■□□□□ 0.08
SHANK2-208ENST00000426687 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
SHANK2-208ENST00000426687 ATP10AO60312 1499 aa15.53■□□□□ 0.08
SHANK2-208ENST00000426687 ZNF335Q9H4Z2 1342 aaPredicted RBP15.51■□□□□ 0.07
SHANK2-208ENST00000426687 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
SHANK2-208ENST00000426687 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
SHANK2-208ENST00000426687 C3P01024 1663 aa15.48■□□□□ 0.07
SHANK2-208ENST00000426687 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-208ENST00000426687 CAMSAP1Q5T5Y3 1602 aa15.46■□□□□ 0.07
SHANK2-208ENST00000426687 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
SHANK2-208ENST00000426687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.43■□□□□ 0.06
SHANK2-208ENST00000426687 SCAPERQ9BY12 1400 aa15.42■□□□□ 0.06
SHANK2-208ENST00000426687 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
SHANK2-208ENST00000426687 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
SHANK2-208ENST00000426687 NUP153P49790 1475 aaKnown RBP15.4■□□□□ 0.06
SHANK2-208ENST00000426687 PLA2R1Q13018 1463 aa15.4■□□□□ 0.06
SHANK2-208ENST00000426687 TOM1O60784 492 aa15.4■□□□□ 0.06
SHANK2-208ENST00000426687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
SHANK2-208ENST00000426687 PIP4K2BP78356 416 aa15.39■□□□□ 0.05
SHANK2-208ENST00000426687 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
SHANK2-208ENST00000426687 TCOF1Q13428 1488 aaKnown RBP15.38■□□□□ 0.05
SHANK2-208ENST00000426687 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
SHANK2-208ENST00000426687 AGLP35573 1532 aa15.38■□□□□ 0.05
SHANK2-208ENST00000426687 NPATQ14207 1427 aa15.37■□□□□ 0.05
SHANK2-208ENST00000426687 PKD2Q13563 968 aa15.37■□□□□ 0.05
SHANK2-208ENST00000426687 RGS17Q9UGC6 210 aaPredicted RBP15.36■□□□□ 0.05
SHANK2-208ENST00000426687 CNTLNQ9NXG0 1405 aa15.35■□□□□ 0.05
SHANK2-208ENST00000426687 CPS1P31327 1500 aa15.35■□□□□ 0.05
SHANK2-208ENST00000426687 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
SHANK2-208ENST00000426687 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.05
SHANK2-208ENST00000426687 KDM5CP41229 1560 aa15.33■□□□□ 0.05
SHANK2-208ENST00000426687 SAMD9Q5K651 1589 aa15.33■□□□□ 0.05
SHANK2-208ENST00000426687 DIP2CQ9Y2E4 1556 aa15.33■□□□□ 0.05
SHANK2-208ENST00000426687 PLCH2O75038 1416 aa15.33■□□□□ 0.04
SHANK2-208ENST00000426687 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-208ENST00000426687 ALKQ9UM73 1620 aa15.32■□□□□ 0.04
SHANK2-208ENST00000426687 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
SHANK2-208ENST00000426687 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
SHANK2-208ENST00000426687 PTPRKQ15262 1439 aa15.31■□□□□ 0.04
SHANK2-208ENST00000426687 ESF1Q9H501 851 aaKnown RBP15.3■□□□□ 0.04
SHANK2-208ENST00000426687 MROH2AA6NES4 1674 aa15.28■□□□□ 0.04
SHANK2-208ENST00000426687 PRXQ9BXM0 1461 aa15.27■□□□□ 0.04
SHANK2-208ENST00000426687 MYO3AQ8NEV4 1616 aa15.27■□□□□ 0.03
SHANK2-208ENST00000426687 CEP170BQ9Y4F5 1589 aaPredicted RBP15.27■□□□□ 0.03
SHANK2-208ENST00000426687 ABCA6Q8N139 1617 aa15.26■□□□□ 0.03
SHANK2-208ENST00000426687 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
SHANK2-208ENST00000426687 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
SHANK2-208ENST00000426687 EFCAB2Q5VUJ9 269 aa15.23■□□□□ 0.03
SHANK2-208ENST00000426687 POTEAQ6S8J7 498 aa15.21■□□□□ 0.03
SHANK2-208ENST00000426687 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
SHANK2-208ENST00000426687 AFAP1Q8N556 730 aa15.2■□□□□ 0.02
SHANK2-208ENST00000426687 ZMYM3Q14202 1370 aa15.2■□□□□ 0.02
SHANK2-208ENST00000426687 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
SHANK2-208ENST00000426687 MYO5CQ9NQX4 1742 aa15.19■□□□□ 0.02
SHANK2-208ENST00000426687 NEURL4Q96JN8 1562 aa15.18■□□□□ 0.02
SHANK2-208ENST00000426687 VWDEQ8N2E2 1590 aa15.17■□□□□ 0.02
SHANK2-208ENST00000426687 SETD1AO15047 1707 aaKnown RBP15.17■□□□□ 0.02
SHANK2-208ENST00000426687 MYT1LQ9UL68 1186 aa15.15■□□□□ 0.02
SHANK2-208ENST00000426687 POLR1AO95602 1720 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-208ENST00000426687 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
SHANK2-208ENST00000426687 A2ML1A8K2U0 1454 aa15.14■□□□□ 0.01
SHANK2-208ENST00000426687 SRCAPQ6ZRS2 3230 aa15.12■□□□□ 0.01
SHANK2-208ENST00000426687 DNMT1P26358 1616 aaKnown RBP15.12■□□□□ 0.01
SHANK2-208ENST00000426687 ARHGAP5Q13017 1502 aa15.12■□□□□ 0.01
SHANK2-208ENST00000426687 CDK13Q14004 1512 aaKnown RBP15.12■□□□□ 0.01
SHANK2-208ENST00000426687 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
SHANK2-208ENST00000426687 SYNMO15061 1565 aa15.09■□□□□ 0.01
SHANK2-208ENST00000426687 KIDINS220Q9ULH0 1771 aa15.08■□□□□ 0.01
SHANK2-208ENST00000426687 UPF1Q92900 1129 aaKnown RBP eCLIP15.08■□□□□ 0
SHANK2-208ENST00000426687 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0
SHANK2-208ENST00000426687 LRRC7Q96NW7 1537 aa15.07■□□□□ 0
SHANK2-208ENST00000426687 ABCC1P33527 1531 aa15.07■□□□□ 0
SHANK2-208ENST00000426687 MED14O60244 1454 aa15.05■□□□□ -0
SHANK2-208ENST00000426687 KIF14Q15058 1648 aa15.05■□□□□ -0
SHANK2-208ENST00000426687 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
SHANK2-208ENST00000426687 DEPDC5O75140 1603 aa15.02□□□□□ -0.01
SHANK2-208ENST00000426687 NPHP4O75161 1426 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-208ENST00000426687 PLXNC1O60486 1568 aa15.01□□□□□ -0.01
SHANK2-208ENST00000426687 STRCP1A6NGW2 1772 aa15□□□□□ -0.01
SHANK2-208ENST00000426687 ANKLE2Q86XL3 938 aa14.99□□□□□ -0.01
SHANK2-208ENST00000426687 FAM135BQ49AJ0 1406 aa14.99□□□□□ -0.01
SHANK2-208ENST00000426687 CDC42BPBQ9Y5S2 1711 aa14.98□□□□□ -0.01
SHANK2-208ENST00000426687 TROQ12816 1431 aaPredicted RBP14.98□□□□□ -0.01
SHANK2-208ENST00000426687 SAMD9LQ8IVG5 1584 aa14.97□□□□□ -0.01
SHANK2-208ENST00000426687 IQGAP1P46940 1657 aa14.97□□□□□ -0.01
SHANK2-208ENST00000426687 PREX2Q70Z35 1606 aa14.96□□□□□ -0.01
SHANK2-208ENST00000426687 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
SHANK2-208ENST00000426687 TNRQ92752 1358 aa14.95□□□□□ -0.02
SHANK2-208ENST00000426687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHANK2-208ENST00000426687 CLIP1P30622 1438 aa14.94□□□□□ -0.02
SHANK2-208ENST00000426687 A2MP01023 1474 aa14.92□□□□□ -0.02
SHANK2-208ENST00000426687 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
SHANK2-208ENST00000426687 NLRP1Q9C000 1473 aa14.9□□□□□ -0.02
SHANK2-208ENST00000426687 ATP7AQ04656 1500 aa14.9□□□□□ -0.02
SHANK2-208ENST00000426687 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
SHANK2-208ENST00000426687 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms