RNA–Protein interactions for RNA: ENST00000419004.2

SNX5-203, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-203ENST00000419004 TOM1O60784 492 aa25.79■■□□□ 1.72
SNX5-203ENST00000419004 ZMYM4Q5VZL5 1548 aa25.74■■□□□ 1.71
SNX5-203ENST00000419004 RGS17Q9UGC6 210 aaPredicted RBP25.74■■□□□ 1.71
SNX5-203ENST00000419004 MAGI2Q86UL8 1455 aa25.73■■□□□ 1.71
SNX5-203ENST00000419004 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
SNX5-203ENST00000419004 ATP10BO94823 1461 aa25.65■■□□□ 1.7
SNX5-203ENST00000419004 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
SNX5-203ENST00000419004 CAMSAP1Q5T5Y3 1602 aa25.63■■□□□ 1.69
SNX5-203ENST00000419004 ATP10AO60312 1499 aa25.6■■□□□ 1.69
SNX5-203ENST00000419004 TRAPPC8Q9Y2L5 1435 aa25.6■■□□□ 1.69
SNX5-203ENST00000419004 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
SNX5-203ENST00000419004 HECW1Q76N89 1606 aa25.59■■□□□ 1.69
SNX5-203ENST00000419004 C9orf84Q5VXU9 1444 aa25.58■■□□□ 1.69
SNX5-203ENST00000419004 C3P01024 1663 aa25.58■■□□□ 1.68
SNX5-203ENST00000419004 CFAP74Q9C0B2 1584 aa25.56■■□□□ 1.68
SNX5-203ENST00000419004 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
SNX5-203ENST00000419004 POTEAQ6S8J7 498 aa25.53■■□□□ 1.68
SNX5-203ENST00000419004 PKD2Q13563 968 aa25.52■■□□□ 1.68
SNX5-203ENST00000419004 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
SNX5-203ENST00000419004 ESF1Q9H501 851 aaKnown RBP25.49■■□□□ 1.67
SNX5-203ENST00000419004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
SNX5-203ENST00000419004 HNRNPUL2Q1KMD3 747 aaKnown RBP25.47■■□□□ 1.67
SNX5-203ENST00000419004 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
SNX5-203ENST00000419004 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
SNX5-203ENST00000419004 SETD1AO15047 1707 aaKnown RBP25.45■■□□□ 1.66
SNX5-203ENST00000419004 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
SNX5-203ENST00000419004 CPS1P31327 1500 aa25.42■■□□□ 1.66
SNX5-203ENST00000419004 SRCAPQ6ZRS2 3230 aa25.4■■□□□ 1.66
SNX5-203ENST00000419004 UPF1Q92900 1129 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNX5-203ENST00000419004 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
SNX5-203ENST00000419004 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
SNX5-203ENST00000419004 TCOF1Q13428 1488 aaKnown RBP25.34■■□□□ 1.65
SNX5-203ENST00000419004 ALKQ9UM73 1620 aa25.34■■□□□ 1.65
SNX5-203ENST00000419004 CTTNBP2Q8WZ74 1663 aa25.32■■□□□ 1.64
SNX5-203ENST00000419004 SUPT6HQ7KZ85 1726 aaKnown RBP25.31■■□□□ 1.64
SNX5-203ENST00000419004 NPATQ14207 1427 aa25.3■■□□□ 1.64
SNX5-203ENST00000419004 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
SNX5-203ENST00000419004 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
SNX5-203ENST00000419004 PLEKHD1A6NEE1 506 aa25.25■■□□□ 1.63
SNX5-203ENST00000419004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.63
SNX5-203ENST00000419004 MYT1LQ9UL68 1186 aa25.22■■□□□ 1.63
SNX5-203ENST00000419004 AGLP35573 1532 aa25.22■■□□□ 1.63
SNX5-203ENST00000419004 P3H3Q8IVL6 736 aa25.2■■□□□ 1.62
SNX5-203ENST00000419004 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.62
SNX5-203ENST00000419004 RAPGEF6Q8TEU7 1601 aa25.19■■□□□ 1.62
SNX5-203ENST00000419004 REREQ9P2R6 1566 aa25.17■■□□□ 1.62
SNX5-203ENST00000419004 CEP170BQ9Y4F5 1589 aaPredicted RBP25.15■■□□□ 1.62
SNX5-203ENST00000419004 MYO3AQ8NEV4 1616 aa25.13■■□□□ 1.61
SNX5-203ENST00000419004 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
SNX5-203ENST00000419004 ZMYM3Q14202 1370 aa25.11■■□□□ 1.61
SNX5-203ENST00000419004 ZNF518AQ6AHZ1 1483 aa25.1■■□□□ 1.61
SNX5-203ENST00000419004 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
SNX5-203ENST00000419004 PLCH2O75038 1416 aa25.09■■□□□ 1.61
SNX5-203ENST00000419004 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
SNX5-203ENST00000419004 NUP153P49790 1475 aaKnown RBP25.07■■□□□ 1.6
SNX5-203ENST00000419004 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
SNX5-203ENST00000419004 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
SNX5-203ENST00000419004 VWDEQ8N2E2 1590 aa25.04■■□□□ 1.6
SNX5-203ENST00000419004 RNF17Q9BXT8 1623 aaKnown RBP25.04■■□□□ 1.6
SNX5-203ENST00000419004 KDM5CP41229 1560 aa25.03■■□□□ 1.6
SNX5-203ENST00000419004 POLR1AO95602 1720 aaPredicted RBP25.03■■□□□ 1.6
SNX5-203ENST00000419004 TRIM52Q96A61 297 aa25.01■■□□□ 1.59
SNX5-203ENST00000419004 ABCA6Q8N139 1617 aa25■■□□□ 1.59
SNX5-203ENST00000419004 NEURL4Q96JN8 1562 aa24.98■■□□□ 1.59
SNX5-203ENST00000419004 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
SNX5-203ENST00000419004 LRRC7Q96NW7 1537 aa24.95■■□□□ 1.58
SNX5-203ENST00000419004 DNMT1P26358 1616 aaKnown RBP24.94■■□□□ 1.58
SNX5-203ENST00000419004 A2ML1A8K2U0 1454 aa24.93■■□□□ 1.58
SNX5-203ENST00000419004 MLH3Q9UHC1 1453 aa24.93■■□□□ 1.58
SNX5-203ENST00000419004 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
SNX5-203ENST00000419004 PRXQ9BXM0 1461 aa24.89■■□□□ 1.58
SNX5-203ENST00000419004 ANKLE2Q86XL3 938 aa24.89■■□□□ 1.58
SNX5-203ENST00000419004 FOXD1Q16676 465 aa24.87■■□□□ 1.57
SNX5-203ENST00000419004 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
SNX5-203ENST00000419004 CLTCQ00610 1675 aaKnown RBP24.86■■□□□ 1.57
SNX5-203ENST00000419004 SYNMO15061 1565 aa24.86■■□□□ 1.57
SNX5-203ENST00000419004 ZNF772Q68DY9 489 aaPredicted RBP24.85■■□□□ 1.57
SNX5-203ENST00000419004 FAM135BQ49AJ0 1406 aa24.85■■□□□ 1.57
SNX5-203ENST00000419004 ZRANB1Q9UGI0 708 aa24.84■■□□□ 1.57
SNX5-203ENST00000419004 STRCP1A6NGW2 1772 aa24.83■■□□□ 1.57
SNX5-203ENST00000419004 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
SNX5-203ENST00000419004 EEA1Q15075 1411 aa24.82■■□□□ 1.56
SNX5-203ENST00000419004 SAMD9Q5K651 1589 aa24.82■■□□□ 1.56
SNX5-203ENST00000419004 NPHP4O75161 1426 aaPredicted RBP24.81■■□□□ 1.56
SNX5-203ENST00000419004 RXRBP28702 533 aa24.79■■□□□ 1.56
SNX5-203ENST00000419004 IFFO2Q5TF58 517 aa24.78■■□□□ 1.56
SNX5-203ENST00000419004 RBM33Q96EV2 1170 aaKnown RBP24.76■■□□□ 1.55
SNX5-203ENST00000419004 MED14O60244 1454 aa24.76■■□□□ 1.55
SNX5-203ENST00000419004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.55
SNX5-203ENST00000419004 ARHGAP5Q13017 1502 aa24.75■■□□□ 1.55
SNX5-203ENST00000419004 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
SNX5-203ENST00000419004 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
SNX5-203ENST00000419004 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
SNX5-203ENST00000419004 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
SNX5-203ENST00000419004 MEX3CQ5U5Q3 659 aaKnown RBP24.7■■□□□ 1.54
SNX5-203ENST00000419004 THEMISQ8N1K5 641 aaPredicted RBP24.7■■□□□ 1.54
SNX5-203ENST00000419004 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
SNX5-203ENST00000419004 JCADQ9P266 1359 aa24.69■■□□□ 1.54
SNX5-203ENST00000419004 CDK13Q14004 1512 aaKnown RBP24.69■■□□□ 1.54
SNX5-203ENST00000419004 ABCC1P33527 1531 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms