RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 FER1L4A9Z1Z3 1794 aa20.69■□□□□ 0.9
DDX39B-204ENST00000418897 PLEKHD1A6NEE1 506 aa20.67■□□□□ 0.9
DDX39B-204ENST00000418897 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
DDX39B-204ENST00000418897 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
DDX39B-204ENST00000418897 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
DDX39B-204ENST00000418897 NUP153P49790 1475 aaKnown RBP20.64■□□□□ 0.89
DDX39B-204ENST00000418897 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.89
DDX39B-204ENST00000418897 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
DDX39B-204ENST00000418897 ATP10AO60312 1499 aa20.62■□□□□ 0.89
DDX39B-204ENST00000418897 HECW1Q76N89 1606 aa20.62■□□□□ 0.89
DDX39B-204ENST00000418897 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
DDX39B-204ENST00000418897 ESF1Q9H501 851 aaKnown RBP20.6■□□□□ 0.89
DDX39B-204ENST00000418897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.59■□□□□ 0.89
DDX39B-204ENST00000418897 C9orf84Q5VXU9 1444 aa20.58■□□□□ 0.88
DDX39B-204ENST00000418897 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
DDX39B-204ENST00000418897 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
DDX39B-204ENST00000418897 HSPA1LP34931 641 aa20.57■□□□□ 0.88
DDX39B-204ENST00000418897 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
DDX39B-204ENST00000418897 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
DDX39B-204ENST00000418897 ZNF335Q9H4Z2 1342 aaPredicted RBP20.54■□□□□ 0.88
DDX39B-204ENST00000418897 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
DDX39B-204ENST00000418897 MED1Q15648 1581 aaPredicted RBP20.53■□□□□ 0.88
DDX39B-204ENST00000418897 TRAPPC8Q9Y2L5 1435 aa20.53■□□□□ 0.88
DDX39B-204ENST00000418897 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
DDX39B-204ENST00000418897 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
DDX39B-204ENST00000418897 TOM1O60784 492 aa20.5■□□□□ 0.87
DDX39B-204ENST00000418897 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
DDX39B-204ENST00000418897 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
DDX39B-204ENST00000418897 PLCH2O75038 1416 aa20.48■□□□□ 0.87
DDX39B-204ENST00000418897 PKD2Q13563 968 aa20.45■□□□□ 0.86
DDX39B-204ENST00000418897 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
DDX39B-204ENST00000418897 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
DDX39B-204ENST00000418897 C3P01024 1663 aa20.39■□□□□ 0.86
DDX39B-204ENST00000418897 CAMSAP1Q5T5Y3 1602 aa20.39■□□□□ 0.86
DDX39B-204ENST00000418897 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
DDX39B-204ENST00000418897 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
DDX39B-204ENST00000418897 CDK13Q14004 1512 aaKnown RBP20.36■□□□□ 0.85
DDX39B-204ENST00000418897 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
DDX39B-204ENST00000418897 ZNF518AQ6AHZ1 1483 aa20.34■□□□□ 0.85
DDX39B-204ENST00000418897 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
DDX39B-204ENST00000418897 NPATQ14207 1427 aa20.31■□□□□ 0.84
DDX39B-204ENST00000418897 KDM5CP41229 1560 aa20.29■□□□□ 0.84
DDX39B-204ENST00000418897 AGLP35573 1532 aa20.27■□□□□ 0.84
DDX39B-204ENST00000418897 REREQ9P2R6 1566 aa20.27■□□□□ 0.84
DDX39B-204ENST00000418897 PLA2R1Q13018 1463 aa20.27■□□□□ 0.84
DDX39B-204ENST00000418897 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
DDX39B-204ENST00000418897 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
DDX39B-204ENST00000418897 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
DDX39B-204ENST00000418897 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
DDX39B-204ENST00000418897 MYO5CQ9NQX4 1742 aa20.23■□□□□ 0.83
DDX39B-204ENST00000418897 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
DDX39B-204ENST00000418897 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
DDX39B-204ENST00000418897 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
DDX39B-204ENST00000418897 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
DDX39B-204ENST00000418897 TCOF1Q13428 1488 aaKnown RBP20.22■□□□□ 0.83
DDX39B-204ENST00000418897 KIF14Q15058 1648 aa20.2■□□□□ 0.82
DDX39B-204ENST00000418897 CPS1P31327 1500 aa20.2■□□□□ 0.82
DDX39B-204ENST00000418897 ARHGAP5Q13017 1502 aa20.2■□□□□ 0.82
DDX39B-204ENST00000418897 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
DDX39B-204ENST00000418897 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
DDX39B-204ENST00000418897 KIDINS220Q9ULH0 1771 aa20.11■□□□□ 0.81
DDX39B-204ENST00000418897 POTEAQ6S8J7 498 aa20.1■□□□□ 0.81
DDX39B-204ENST00000418897 CDC42BPBQ9Y5S2 1711 aa20.1■□□□□ 0.81
DDX39B-204ENST00000418897 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
DDX39B-204ENST00000418897 MROH2AA6NES4 1674 aa20.09■□□□□ 0.81
DDX39B-204ENST00000418897 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
DDX39B-204ENST00000418897 ALKQ9UM73 1620 aa20.05■□□□□ 0.8
DDX39B-204ENST00000418897 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
DDX39B-204ENST00000418897 ABCC1P33527 1531 aa20.05■□□□□ 0.8
DDX39B-204ENST00000418897 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
DDX39B-204ENST00000418897 GGT6Q6P531 493 aa20.04■□□□□ 0.8
DDX39B-204ENST00000418897 SUPT6HQ7KZ85 1726 aaKnown RBP20.03■□□□□ 0.8
DDX39B-204ENST00000418897 A2ML1A8K2U0 1454 aa20.02■□□□□ 0.8
DDX39B-204ENST00000418897 ITSN2Q9NZM3 1697 aa20.02■□□□□ 0.8
DDX39B-204ENST00000418897 CLIP1P30622 1438 aa20.02■□□□□ 0.79
DDX39B-204ENST00000418897 FMN1Q68DA7 1419 aa20.02■□□□□ 0.79
DDX39B-204ENST00000418897 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
DDX39B-204ENST00000418897 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDX39B-204ENST00000418897 SAMD9LQ8IVG5 1584 aa19.99■□□□□ 0.79
DDX39B-204ENST00000418897 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
DDX39B-204ENST00000418897 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
DDX39B-204ENST00000418897 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
DDX39B-204ENST00000418897 DNMT1P26358 1616 aaKnown RBP19.97■□□□□ 0.79
DDX39B-204ENST00000418897 PREX2Q70Z35 1606 aa19.97■□□□□ 0.79
DDX39B-204ENST00000418897 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
DDX39B-204ENST00000418897 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
DDX39B-204ENST00000418897 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
DDX39B-204ENST00000418897 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
DDX39B-204ENST00000418897 EEA1Q15075 1411 aa19.95■□□□□ 0.78
DDX39B-204ENST00000418897 FBXO31Q5XUX0 539 aaPredicted RBP19.95■□□□□ 0.78
DDX39B-204ENST00000418897 VWDEQ8N2E2 1590 aa19.92■□□□□ 0.78
DDX39B-204ENST00000418897 UPF1Q92900 1129 aaKnown RBP eCLIP19.92■□□□□ 0.78
DDX39B-204ENST00000418897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
DDX39B-204ENST00000418897 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
DDX39B-204ENST00000418897 A2MP01023 1474 aa19.91■□□□□ 0.78
DDX39B-204ENST00000418897 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
DDX39B-204ENST00000418897 PLXNC1O60486 1568 aa19.89■□□□□ 0.77
DDX39B-204ENST00000418897 TNRQ92752 1358 aa19.89■□□□□ 0.77
DDX39B-204ENST00000418897 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
DDX39B-204ENST00000418897 CDC42BPAQ5VT25 1732 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms