RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 CFAP74Q9C0B2 1584 aa12.8□□□□□ -0.36
RBM39-208ENST00000416108 MAP3K4Q9Y6R4 1608 aa12.78□□□□□ -0.36
RBM39-208ENST00000416108 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
RBM39-208ENST00000416108 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
RBM39-208ENST00000416108 CFDP1Q9UEE9 299 aaPredicted RBP12.77□□□□□ -0.37
RBM39-208ENST00000416108 CAMSAP2Q08AD1 1489 aa12.76□□□□□ -0.37
RBM39-208ENST00000416108 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
RBM39-208ENST00000416108 PLCH2O75038 1416 aa12.75□□□□□ -0.37
RBM39-208ENST00000416108 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
RBM39-208ENST00000416108 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
RBM39-208ENST00000416108 SAMD9LQ8IVG5 1584 aa12.74□□□□□ -0.37
RBM39-208ENST00000416108 CD109Q6YHK3 1445 aa12.74□□□□□ -0.37
RBM39-208ENST00000416108 PLEKHH2Q8IVE3 1493 aa12.73□□□□□ -0.37
RBM39-208ENST00000416108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
RBM39-208ENST00000416108 PCGF6Q9BYE7 350 aa12.73□□□□□ -0.37
RBM39-208ENST00000416108 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
RBM39-208ENST00000416108 FAM69CQ0P6D2 419 aa12.72□□□□□ -0.37
RBM39-208ENST00000416108 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
RBM39-208ENST00000416108 FANCAO15360 1455 aa12.72□□□□□ -0.37
RBM39-208ENST00000416108 ADGBQ8N7X0 1667 aa12.71□□□□□ -0.37
RBM39-208ENST00000416108 ARHGEF5Q12774 1597 aa12.7□□□□□ -0.38
RBM39-208ENST00000416108 ABCC1P33527 1531 aa12.7□□□□□ -0.38
RBM39-208ENST00000416108 TEX14Q8IWB6 1497 aa12.7□□□□□ -0.38
RBM39-208ENST00000416108 SYCP2Q9BX26 1530 aa12.69□□□□□ -0.38
RBM39-208ENST00000416108 ITGAEP38570 1179 aa12.69□□□□□ -0.38
RBM39-208ENST00000416108 PPRC1Q5VV67 1664 aaKnown RBP12.69□□□□□ -0.38
RBM39-208ENST00000416108 ADGRL1O94910 1474 aa12.67□□□□□ -0.38
RBM39-208ENST00000416108 NEO1Q92859 1461 aa12.67□□□□□ -0.38
RBM39-208ENST00000416108 ZNF644Q9H582 1327 aaPredicted RBP12.66□□□□□ -0.38
RBM39-208ENST00000416108 DAPK1P53355 1430 aa12.66□□□□□ -0.38
RBM39-208ENST00000416108 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
RBM39-208ENST00000416108 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
RBM39-208ENST00000416108 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
RBM39-208ENST00000416108 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
RBM39-208ENST00000416108 GCC2Q8IWJ2 1684 aa12.64□□□□□ -0.39
RBM39-208ENST00000416108 RSPH4AQ5TD94 716 aa12.64□□□□□ -0.39
RBM39-208ENST00000416108 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
RBM39-208ENST00000416108 ABCC5O15440 1437 aa12.62□□□□□ -0.39
RBM39-208ENST00000416108 MAST1Q9Y2H9 1570 aa12.62□□□□□ -0.39
RBM39-208ENST00000416108 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
RBM39-208ENST00000416108 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
RBM39-208ENST00000416108 HNRNPMP52272 730 aaKnown RBP eCLIP12.62□□□□□ -0.39
RBM39-208ENST00000416108 RICTORQ6R327 1708 aa12.62□□□□□ -0.39
RBM39-208ENST00000416108 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
RBM39-208ENST00000416108 MBD5Q9P267 1494 aa12.61□□□□□ -0.39
RBM39-208ENST00000416108 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
RBM39-208ENST00000416108 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
RBM39-208ENST00000416108 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
RBM39-208ENST00000416108 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
RBM39-208ENST00000416108 MYT1LQ9UL68 1186 aa12.59□□□□□ -0.39
RBM39-208ENST00000416108 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
RBM39-208ENST00000416108 PLXNC1O60486 1568 aa12.58□□□□□ -0.4
RBM39-208ENST00000416108 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
RBM39-208ENST00000416108 CHIC2Q9UKJ5 165 aa12.58□□□□□ -0.4
RBM39-208ENST00000416108 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
RBM39-208ENST00000416108 ADGRL2O95490 1459 aa12.58□□□□□ -0.4
RBM39-208ENST00000416108 INO80Q9ULG1 1556 aaPredicted RBP12.57□□□□□ -0.4
RBM39-208ENST00000416108 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
RBM39-208ENST00000416108 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
RBM39-208ENST00000416108 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
RBM39-208ENST00000416108 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
RBM39-208ENST00000416108 KDM5CP41229 1560 aa12.56□□□□□ -0.4
RBM39-208ENST00000416108 ZFYVE16Q7Z3T8 1539 aa12.56□□□□□ -0.4
RBM39-208ENST00000416108 SPAG9O60271 1321 aaKnown RBP12.56□□□□□ -0.4
RBM39-208ENST00000416108 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
RBM39-208ENST00000416108 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
RBM39-208ENST00000416108 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
RBM39-208ENST00000416108 RRP7BPQ9NSQ0 103 aa12.54□□□□□ -0.4
RBM39-208ENST00000416108 KDM6BO15054 1643 aa12.54□□□□□ -0.4
RBM39-208ENST00000416108 RTEL1-TNFRSF6BF6WH68 1400 aa12.54□□□□□ -0.4
RBM39-208ENST00000416108 FRMPD1Q5SYB0 1578 aa12.53□□□□□ -0.4
RBM39-208ENST00000416108 AFAP1Q8N556 730 aa12.53□□□□□ -0.4
RBM39-208ENST00000416108 ZMYM4Q5VZL5 1548 aa12.52□□□□□ -0.4
RBM39-208ENST00000416108 NAIPQ13075 1403 aa12.52□□□□□ -0.41
RBM39-208ENST00000416108 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
RBM39-208ENST00000416108 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
RBM39-208ENST00000416108 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
RBM39-208ENST00000416108 MLH3Q9UHC1 1453 aa12.51□□□□□ -0.41
RBM39-208ENST00000416108 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
RBM39-208ENST00000416108 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
RBM39-208ENST00000416108 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
RBM39-208ENST00000416108 EIF2AK4Q9P2K8 1649 aaKnown RBP12.48□□□□□ -0.41
RBM39-208ENST00000416108 MAGI2Q86UL8 1455 aa12.48□□□□□ -0.41
RBM39-208ENST00000416108 RAPGEF3O95398 923 aa12.48□□□□□ -0.41
RBM39-208ENST00000416108 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
RBM39-208ENST00000416108 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
RBM39-208ENST00000416108 ERBINQ96RT1 1412 aa12.46□□□□□ -0.41
RBM39-208ENST00000416108 ARHGEF40Q8TER5 1519 aa12.46□□□□□ -0.42
RBM39-208ENST00000416108 A2MP01023 1474 aa12.45□□□□□ -0.42
RBM39-208ENST00000416108 UNC13BO14795 1591 aa12.44□□□□□ -0.42
RBM39-208ENST00000416108 HRCP23327 699 aa12.44□□□□□ -0.42
RBM39-208ENST00000416108 COL17A1Q9UMD9 1497 aaPredicted RBP12.44□□□□□ -0.42
RBM39-208ENST00000416108 BCORL1Q5H9F3 1711 aa12.43□□□□□ -0.42
RBM39-208ENST00000416108 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
RBM39-208ENST00000416108 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
RBM39-208ENST00000416108 REREQ9P2R6 1566 aa12.42□□□□□ -0.42
RBM39-208ENST00000416108 DHX29Q7Z478 1369 aaKnown RBP12.42□□□□□ -0.42
RBM39-208ENST00000416108 ATP10AO60312 1499 aa12.41□□□□□ -0.42
RBM39-208ENST00000416108 DEPDC5O75140 1603 aa12.41□□□□□ -0.42
RBM39-208ENST00000416108 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms