RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PHLDB1Q86UU1 1377 aa22.29■■□□□ 1.16
SGCE-202ENST00000415788 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
SGCE-202ENST00000415788 FANCAO15360 1455 aa22.28■■□□□ 1.16
SGCE-202ENST00000415788 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
SGCE-202ENST00000415788 NEO1Q92859 1461 aa22.27■■□□□ 1.16
SGCE-202ENST00000415788 MIA2Q96PC5 1412 aa22.26■■□□□ 1.15
SGCE-202ENST00000415788 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
SGCE-202ENST00000415788 CFAP74Q9C0B2 1584 aa22.26■■□□□ 1.15
SGCE-202ENST00000415788 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
SGCE-202ENST00000415788 TSPOAP1O95153 1857 aa22.24■■□□□ 1.15
SGCE-202ENST00000415788 CDC42BPBQ9Y5S2 1711 aa22.24■■□□□ 1.15
SGCE-202ENST00000415788 FGD6Q6ZV73 1430 aa22.21■■□□□ 1.15
SGCE-202ENST00000415788 AKNAQ7Z591 1439 aa22.21■■□□□ 1.15
SGCE-202ENST00000415788 PLEKHH2Q8IVE3 1493 aa22.2■■□□□ 1.14
SGCE-202ENST00000415788 ZNF777Q9ULD5 760 aaPredicted RBP22.19■■□□□ 1.14
SGCE-202ENST00000415788 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
SGCE-202ENST00000415788 KIAA1107Q9UPP5 1409 aa22.16■■□□□ 1.14
SGCE-202ENST00000415788 SAMD9LQ8IVG5 1584 aa22.16■■□□□ 1.14
SGCE-202ENST00000415788 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
SGCE-202ENST00000415788 ABCC1P33527 1531 aa22.14■■□□□ 1.14
SGCE-202ENST00000415788 TCOF1Q13428 1488 aaKnown RBP22.14■■□□□ 1.13
SGCE-202ENST00000415788 SCAPERQ9BY12 1400 aa22.13■■□□□ 1.13
SGCE-202ENST00000415788 ZNF644Q9H582 1327 aaPredicted RBP22.13■■□□□ 1.13
SGCE-202ENST00000415788 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
SGCE-202ENST00000415788 PTPN23Q9H3S7 1636 aa22.12■■□□□ 1.13
SGCE-202ENST00000415788 DENND4BO75064 1496 aaPredicted RBP22.11■■□□□ 1.13
SGCE-202ENST00000415788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.13
SGCE-202ENST00000415788 RSPH4AQ5TD94 716 aa22.1■■□□□ 1.13
SGCE-202ENST00000415788 SYCP2Q9BX26 1530 aa22.09■■□□□ 1.13
SGCE-202ENST00000415788 POGZQ7Z3K3 1410 aa22.08■■□□□ 1.13
SGCE-202ENST00000415788 MBD5Q9P267 1494 aa22.07■■□□□ 1.12
SGCE-202ENST00000415788 ARHGEF12Q9NZN5 1544 aa22.07■■□□□ 1.12
SGCE-202ENST00000415788 HNRNPMP52272 730 aaKnown RBP eCLIP22.07■■□□□ 1.125e-8■■■■■ 27.1
SGCE-202ENST00000415788 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
SGCE-202ENST00000415788 ZNF518AQ6AHZ1 1483 aa22.07■■□□□ 1.12
SGCE-202ENST00000415788 KDM6BO15054 1643 aa22.06■■□□□ 1.12
SGCE-202ENST00000415788 COL17A1Q9UMD9 1497 aaPredicted RBP22.05■■□□□ 1.12
SGCE-202ENST00000415788 ARHGEF5Q12774 1597 aa22.05■■□□□ 1.12
SGCE-202ENST00000415788 TRAPPC8Q9Y2L5 1435 aa22.04■■□□□ 1.12
SGCE-202ENST00000415788 CCDC141Q6ZP82 1450 aa22.03■■□□□ 1.12
SGCE-202ENST00000415788 RAPGEF3O95398 923 aa22.03■■□□□ 1.12
SGCE-202ENST00000415788 AFAP1Q8N556 730 aa22■■□□□ 1.11
SGCE-202ENST00000415788 RICTORQ6R327 1708 aa22■■□□□ 1.11
SGCE-202ENST00000415788 KDM5CP41229 1560 aa22■■□□□ 1.11
SGCE-202ENST00000415788 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
SGCE-202ENST00000415788 DAPK1P53355 1430 aa21.98■■□□□ 1.11
SGCE-202ENST00000415788 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
SGCE-202ENST00000415788 TSPY4P0CV99 314 aa21.98■■□□□ 1.11
SGCE-202ENST00000415788 TSPY10P0CW01 314 aa21.98■■□□□ 1.11
SGCE-202ENST00000415788 DNMT1P26358 1616 aaKnown RBP21.98■■□□□ 1.11
SGCE-202ENST00000415788 ABCC5O15440 1437 aa21.97■■□□□ 1.11
SGCE-202ENST00000415788 MAGI2Q86UL8 1455 aa21.97■■□□□ 1.11
SGCE-202ENST00000415788 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
SGCE-202ENST00000415788 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
SGCE-202ENST00000415788 MLH3Q9UHC1 1453 aa21.95■■□□□ 1.11
SGCE-202ENST00000415788 RTEL1-TNFRSF6BF6WH68 1400 aa21.95■■□□□ 1.1
SGCE-202ENST00000415788 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
SGCE-202ENST00000415788 C9orf84Q5VXU9 1444 aa21.92■■□□□ 1.1
SGCE-202ENST00000415788 MAST1Q9Y2H9 1570 aa21.91■■□□□ 1.1
SGCE-202ENST00000415788 MYT1LQ9UL68 1186 aa21.9■■□□□ 1.1
SGCE-202ENST00000415788 CROCC2H7BZ55 1655 aa21.9■■□□□ 1.1
SGCE-202ENST00000415788 ATP7AQ04656 1500 aa21.89■■□□□ 1.1
SGCE-202ENST00000415788 ZFYVE16Q7Z3T8 1539 aa21.89■■□□□ 1.1
SGCE-202ENST00000415788 INO80Q9ULG1 1556 aaPredicted RBP21.89■■□□□ 1.1
SGCE-202ENST00000415788 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
SGCE-202ENST00000415788 ITGAEP38570 1179 aa21.87■■□□□ 1.09
SGCE-202ENST00000415788 PTPRKQ15262 1439 aa21.86■■□□□ 1.09
SGCE-202ENST00000415788 ANKRD30AQ9BXX3 1397 aa21.85■■□□□ 1.09
SGCE-202ENST00000415788 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
SGCE-202ENST00000415788 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
SGCE-202ENST00000415788 KIDINS220Q9ULH0 1771 aa21.85■■□□□ 1.09
SGCE-202ENST00000415788 ARHGEF40Q8TER5 1519 aa21.84■■□□□ 1.09
SGCE-202ENST00000415788 YEATS2Q9ULM3 1422 aa21.84■■□□□ 1.09
SGCE-202ENST00000415788 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
SGCE-202ENST00000415788 PLXNC1O60486 1568 aa21.83■■□□□ 1.08
SGCE-202ENST00000415788 NCOA1Q15788 1441 aa21.82■■□□□ 1.08
SGCE-202ENST00000415788 ATP10AO60312 1499 aa21.81■■□□□ 1.08
SGCE-202ENST00000415788 DIP2CQ9Y2E4 1556 aa21.8■■□□□ 1.08
SGCE-202ENST00000415788 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
SGCE-202ENST00000415788 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
SGCE-202ENST00000415788 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
SGCE-202ENST00000415788 REREQ9P2R6 1566 aa21.77■■□□□ 1.08
SGCE-202ENST00000415788 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.08
SGCE-202ENST00000415788 A2MP01023 1474 aa21.77■■□□□ 1.07
SGCE-202ENST00000415788 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
SGCE-202ENST00000415788 DHX29Q7Z478 1369 aaKnown RBP21.75■■□□□ 1.07
SGCE-202ENST00000415788 DUOX2Q9NRD8 1548 aa21.75■■□□□ 1.07
SGCE-202ENST00000415788 HFM1A2PYH4 1435 aa21.73■■□□□ 1.07
SGCE-202ENST00000415788 ERBINQ96RT1 1412 aa21.72■■□□□ 1.07
SGCE-202ENST00000415788 AGLP35573 1532 aa21.7■■□□□ 1.06
SGCE-202ENST00000415788 ANKRD50Q9ULJ7 1429 aa21.7■■□□□ 1.06
SGCE-202ENST00000415788 NAIPQ13075 1403 aa21.69■■□□□ 1.06
SGCE-202ENST00000415788 EIF2AK4Q9P2K8 1649 aaKnown RBP21.66■■□□□ 1.06
SGCE-202ENST00000415788 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
SGCE-202ENST00000415788 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
SGCE-202ENST00000415788 PELP1Q8IZL8 1130 aaKnown RBP21.64■■□□□ 1.05
SGCE-202ENST00000415788 KIF3BO15066 747 aa21.63■■□□□ 1.05
SGCE-202ENST00000415788 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
SGCE-202ENST00000415788 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
SGCE-202ENST00000415788 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms