RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
TRAPPC12-204ENST00000415624 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
TRAPPC12-204ENST00000415624 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
TRAPPC12-204ENST00000415624 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
TRAPPC12-204ENST00000415624 CD109Q6YHK3 1445 aa17.03■□□□□ 0.32
TRAPPC12-204ENST00000415624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRAPPC12-204ENST00000415624 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
TRAPPC12-204ENST00000415624 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.31
TRAPPC12-204ENST00000415624 HSPA2P54652 639 aa17.01■□□□□ 0.31
TRAPPC12-204ENST00000415624 PREX2Q70Z35 1606 aa17■□□□□ 0.31
TRAPPC12-204ENST00000415624 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
TRAPPC12-204ENST00000415624 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
TRAPPC12-204ENST00000415624 ARAP3Q8WWN8 1544 aa16.95■□□□□ 0.3
TRAPPC12-204ENST00000415624 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
TRAPPC12-204ENST00000415624 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
TRAPPC12-204ENST00000415624 PHLDB1Q86UU1 1377 aa16.93■□□□□ 0.3
TRAPPC12-204ENST00000415624 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
TRAPPC12-204ENST00000415624 CCNB3Q8WWL7 1395 aa16.92■□□□□ 0.3
TRAPPC12-204ENST00000415624 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
TRAPPC12-204ENST00000415624 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
TRAPPC12-204ENST00000415624 GPATCH8Q9UKJ3 1502 aaKnown RBP16.9■□□□□ 0.3
TRAPPC12-204ENST00000415624 PTPN23Q9H3S7 1636 aa16.89■□□□□ 0.29
TRAPPC12-204ENST00000415624 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
TRAPPC12-204ENST00000415624 RAPGEF3O95398 923 aa16.88■□□□□ 0.29
TRAPPC12-204ENST00000415624 SAMD9LQ8IVG5 1584 aa16.87■□□□□ 0.29
TRAPPC12-204ENST00000415624 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC12-204ENST00000415624 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
TRAPPC12-204ENST00000415624 RIMS1Q86UR5 1692 aaKnown RBP16.85■□□□□ 0.29
TRAPPC12-204ENST00000415624 CAMSAP2Q08AD1 1489 aa16.85■□□□□ 0.29
TRAPPC12-204ENST00000415624 FANCAO15360 1455 aa16.83■□□□□ 0.28
TRAPPC12-204ENST00000415624 PLCH2O75038 1416 aa16.83■□□□□ 0.28
TRAPPC12-204ENST00000415624 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
TRAPPC12-204ENST00000415624 ABCC1P33527 1531 aa16.82■□□□□ 0.28
TRAPPC12-204ENST00000415624 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
TRAPPC12-204ENST00000415624 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
TRAPPC12-204ENST00000415624 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
TRAPPC12-204ENST00000415624 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
TRAPPC12-204ENST00000415624 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
TRAPPC12-204ENST00000415624 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC12-204ENST00000415624 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC12-204ENST00000415624 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
TRAPPC12-204ENST00000415624 FRMPD1Q5SYB0 1578 aa16.77■□□□□ 0.27
TRAPPC12-204ENST00000415624 FAM50AQ14320 339 aaKnown RBP16.76■□□□□ 0.27
TRAPPC12-204ENST00000415624 NEO1Q92859 1461 aa16.75■□□□□ 0.27
TRAPPC12-204ENST00000415624 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC12-204ENST00000415624 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
TRAPPC12-204ENST00000415624 AKNAQ7Z591 1439 aa16.73■□□□□ 0.27
TRAPPC12-204ENST00000415624 EFCAB2Q5VUJ9 269 aa16.73■□□□□ 0.27
TRAPPC12-204ENST00000415624 RICTORQ6R327 1708 aa16.73■□□□□ 0.27
TRAPPC12-204ENST00000415624 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
TRAPPC12-204ENST00000415624 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
TRAPPC12-204ENST00000415624 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
TRAPPC12-204ENST00000415624 STRCQ7RTU9 1775 aa16.71■□□□□ 0.27
TRAPPC12-204ENST00000415624 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
TRAPPC12-204ENST00000415624 CCDC141Q6ZP82 1450 aa16.69■□□□□ 0.26
TRAPPC12-204ENST00000415624 DAPK1P53355 1430 aa16.69■□□□□ 0.26
TRAPPC12-204ENST00000415624 SCAPERQ9BY12 1400 aa16.69■□□□□ 0.26
TRAPPC12-204ENST00000415624 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 ITGAEP38570 1179 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 TRAPPC8Q9Y2L5 1435 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 MBD5Q9P267 1494 aa16.67■□□□□ 0.26
TRAPPC12-204ENST00000415624 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-204ENST00000415624 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
TRAPPC12-204ENST00000415624 DENND4BO75064 1496 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-204ENST00000415624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■■■■□ 26.4
TRAPPC12-204ENST00000415624 KDM5CP41229 1560 aa16.65■□□□□ 0.26
TRAPPC12-204ENST00000415624 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■■■□ 26.1
TRAPPC12-204ENST00000415624 ABCC5O15440 1437 aa16.64■□□□□ 0.25
TRAPPC12-204ENST00000415624 ZNF518AQ6AHZ1 1483 aa16.64■□□□□ 0.25
TRAPPC12-204ENST00000415624 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
TRAPPC12-204ENST00000415624 ZFYVE16Q7Z3T8 1539 aa16.64■□□□□ 0.25
TRAPPC12-204ENST00000415624 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
TRAPPC12-204ENST00000415624 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-204ENST00000415624 MLECQ14165 292 aa16.63■□□□□ 0.25
TRAPPC12-204ENST00000415624 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
TRAPPC12-204ENST00000415624 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
TRAPPC12-204ENST00000415624 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
TRAPPC12-204ENST00000415624 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
TRAPPC12-204ENST00000415624 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
TRAPPC12-204ENST00000415624 KIDINS220Q9ULH0 1771 aa16.61■□□□□ 0.25
TRAPPC12-204ENST00000415624 ZMYM4Q5VZL5 1548 aa16.61■□□□□ 0.25
TRAPPC12-204ENST00000415624 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
TRAPPC12-204ENST00000415624 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
TRAPPC12-204ENST00000415624 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
TRAPPC12-204ENST00000415624 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
TRAPPC12-204ENST00000415624 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-204ENST00000415624 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
TRAPPC12-204ENST00000415624 ADGRL2O95490 1459 aa16.56■□□□□ 0.24
TRAPPC12-204ENST00000415624 PTPRTO14522 1441 aa16.56■□□□□ 0.24
TRAPPC12-204ENST00000415624 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
TRAPPC12-204ENST00000415624 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
TRAPPC12-204ENST00000415624 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
TRAPPC12-204ENST00000415624 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-204ENST00000415624 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
TRAPPC12-204ENST00000415624 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
TRAPPC12-204ENST00000415624 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.24
TRAPPC12-204ENST00000415624 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms