RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.41
SMARCA4-202ENST00000413806 RAPGEF2Q9Y4G8 1499 aa17.58■□□□□ 0.4
SMARCA4-202ENST00000413806 ANKRD30AQ9BXX3 1397 aa17.57■□□□□ 0.4
SMARCA4-202ENST00000413806 ZRSR1Q15695 479 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-202ENST00000413806 MORC1Q86VD1 984 aa17.56■□□□□ 0.4
SMARCA4-202ENST00000413806 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-202ENST00000413806 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
SMARCA4-202ENST00000413806 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-202ENST00000413806 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-202ENST00000413806 HDGFP51858 240 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-202ENST00000413806 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
SMARCA4-202ENST00000413806 HAP1P54257 671 aaPredicted RBP17.52■□□□□ 0.39
SMARCA4-202ENST00000413806 HSCBQ8IWL3 235 aa17.52■□□□□ 0.39
SMARCA4-202ENST00000413806 A0A0G2JS52 829 aa17.51■□□□□ 0.39
SMARCA4-202ENST00000413806 NUP155O75694 1391 aa17.5■□□□□ 0.39
SMARCA4-202ENST00000413806 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
SMARCA4-202ENST00000413806 PLCB2Q00722 1185 aa17.49■□□□□ 0.39
SMARCA4-202ENST00000413806 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-202ENST00000413806 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-202ENST00000413806 FOXD1Q16676 465 aa17.49■□□□□ 0.39
SMARCA4-202ENST00000413806 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
SMARCA4-202ENST00000413806 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
SMARCA4-202ENST00000413806 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
SMARCA4-202ENST00000413806 ARID3AQ99856 593 aa17.47■□□□□ 0.39
SMARCA4-202ENST00000413806 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-202ENST00000413806 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
SMARCA4-202ENST00000413806 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-202ENST00000413806 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
SMARCA4-202ENST00000413806 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.38
SMARCA4-202ENST00000413806 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
SMARCA4-202ENST00000413806 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-202ENST00000413806 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
SMARCA4-202ENST00000413806 RSPH6AQ9H0K4 717 aa17.44■□□□□ 0.38
SMARCA4-202ENST00000413806 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-202ENST00000413806 TNNT3P45378 269 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-202ENST00000413806 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-202ENST00000413806 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
SMARCA4-202ENST00000413806 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
SMARCA4-202ENST00000413806 MCCP23508 829 aa17.43■□□□□ 0.38
SMARCA4-202ENST00000413806 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-202ENST00000413806 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
SMARCA4-202ENST00000413806 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-202ENST00000413806 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
SMARCA4-202ENST00000413806 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
SMARCA4-202ENST00000413806 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
SMARCA4-202ENST00000413806 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-202ENST00000413806 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
SMARCA4-202ENST00000413806 PTMSP20962 102 aa17.39■□□□□ 0.37
SMARCA4-202ENST00000413806 KCNJ4P48050 445 aa17.38■□□□□ 0.37
SMARCA4-202ENST00000413806 NLRP13Q86W25 1043 aa17.37■□□□□ 0.37
SMARCA4-202ENST00000413806 FGD1P98174 961 aa17.36■□□□□ 0.37
SMARCA4-202ENST00000413806 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
SMARCA4-202ENST00000413806 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-202ENST00000413806 PMFBP1Q8TBY8 1022 aa17.36■□□□□ 0.37
SMARCA4-202ENST00000413806 GGT6Q6P531 493 aa17.36■□□□□ 0.37
SMARCA4-202ENST00000413806 KIF15Q9NS87 1388 aa17.35■□□□□ 0.37
SMARCA4-202ENST00000413806 NRDCO43847 1150 aa17.34■□□□□ 0.37
SMARCA4-202ENST00000413806 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
SMARCA4-202ENST00000413806 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMARCA4-202ENST00000413806 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.372e-6■□□□□ 10.3
SMARCA4-202ENST00000413806 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
SMARCA4-202ENST00000413806 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
SMARCA4-202ENST00000413806 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
SMARCA4-202ENST00000413806 STK26Q9P289 416 aa17.31■□□□□ 0.36
SMARCA4-202ENST00000413806 ITPRIPQ8IWB1 547 aa17.3■□□□□ 0.36
SMARCA4-202ENST00000413806 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-202ENST00000413806 SPRYD3Q8NCJ5 442 aa17.29■□□□□ 0.36
SMARCA4-202ENST00000413806 IPO9Q96P70 1041 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-202ENST00000413806 GOLGA6L3A6NEY3 463 aa17.29■□□□□ 0.36
SMARCA4-202ENST00000413806 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
SMARCA4-202ENST00000413806 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.365e-6■■□□□ 11.8
SMARCA4-202ENST00000413806 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
SMARCA4-202ENST00000413806 GZF1Q9H116 711 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-202ENST00000413806 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
SMARCA4-202ENST00000413806 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.35
SMARCA4-202ENST00000413806 MLECQ14165 292 aa17.26■□□□□ 0.35
SMARCA4-202ENST00000413806 DRC7Q8IY82 874 aa17.26■□□□□ 0.35
SMARCA4-202ENST00000413806 SPAG9O60271 1321 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-202ENST00000413806 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
SMARCA4-202ENST00000413806 KIF3BO15066 747 aa17.25■□□□□ 0.35
SMARCA4-202ENST00000413806 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-202ENST00000413806 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-202ENST00000413806 SOX12O15370 315 aa17.24■□□□□ 0.35
SMARCA4-202ENST00000413806 UACAQ9BZF9 1416 aa17.24■□□□□ 0.35
SMARCA4-202ENST00000413806 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
SMARCA4-202ENST00000413806 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
SMARCA4-202ENST00000413806 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
SMARCA4-202ENST00000413806 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
SMARCA4-202ENST00000413806 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.34
SMARCA4-202ENST00000413806 CUX1P39880 1505 aa17.19■□□□□ 0.34
SMARCA4-202ENST00000413806 PRKRIP1Q9H875 184 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-202ENST00000413806 HMMRO75330 724 aa17.19■□□□□ 0.34
SMARCA4-202ENST00000413806 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
SMARCA4-202ENST00000413806 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
SMARCA4-202ENST00000413806 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
SMARCA4-202ENST00000413806 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-202ENST00000413806 PKNOX2Q96KN3 472 aa17.18■□□□□ 0.34
SMARCA4-202ENST00000413806 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
SMARCA4-202ENST00000413806 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
SMARCA4-202ENST00000413806 NPHP1O15259 732 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms