RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.19
NCKIPSD-202ENST00000413374 MLECQ14165 292 aa16.21■□□□□ 0.19
NCKIPSD-202ENST00000413374 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
NCKIPSD-202ENST00000413374 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
NCKIPSD-202ENST00000413374 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
NCKIPSD-202ENST00000413374 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
NCKIPSD-202ENST00000413374 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
NCKIPSD-202ENST00000413374 HNRNPMP52272 730 aaKnown RBP eCLIP16.16■□□□□ 0.189e-7■■■□□ 18.8
NCKIPSD-202ENST00000413374 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
NCKIPSD-202ENST00000413374 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
NCKIPSD-202ENST00000413374 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
NCKIPSD-202ENST00000413374 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
NCKIPSD-202ENST00000413374 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
NCKIPSD-202ENST00000413374 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
NCKIPSD-202ENST00000413374 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-202ENST00000413374 ARHGEF12Q9NZN5 1544 aa16.12■□□□□ 0.17
NCKIPSD-202ENST00000413374 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-202ENST00000413374 MAGI2Q86UL8 1455 aa16.11■□□□□ 0.17
NCKIPSD-202ENST00000413374 ATP10AO60312 1499 aa16.1■□□□□ 0.17
NCKIPSD-202ENST00000413374 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
NCKIPSD-202ENST00000413374 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
NCKIPSD-202ENST00000413374 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-202ENST00000413374 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
NCKIPSD-202ENST00000413374 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
NCKIPSD-202ENST00000413374 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.17
NCKIPSD-202ENST00000413374 PTPRMP28827 1452 aa16.07■□□□□ 0.16
NCKIPSD-202ENST00000413374 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
NCKIPSD-202ENST00000413374 SPAG9O60271 1321 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-202ENST00000413374 C9orf84Q5VXU9 1444 aa16.04■□□□□ 0.16
NCKIPSD-202ENST00000413374 ABCC1P33527 1531 aa16.04■□□□□ 0.16
NCKIPSD-202ENST00000413374 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
NCKIPSD-202ENST00000413374 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-202ENST00000413374 APLP2Q06481 763 aa16.03■□□□□ 0.16
NCKIPSD-202ENST00000413374 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
NCKIPSD-202ENST00000413374 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.16
NCKIPSD-202ENST00000413374 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.16
NCKIPSD-202ENST00000413374 MLH3Q9UHC1 1453 aa16.02■□□□□ 0.15
NCKIPSD-202ENST00000413374 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
NCKIPSD-202ENST00000413374 SAMD9LQ8IVG5 1584 aa16.01■□□□□ 0.15
NCKIPSD-202ENST00000413374 SYCP2Q9BX26 1530 aa16.01■□□□□ 0.15
NCKIPSD-202ENST00000413374 SIGLEC1Q9BZZ2 1709 aa16.01■□□□□ 0.15
NCKIPSD-202ENST00000413374 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
NCKIPSD-202ENST00000413374 KDM5CP41229 1560 aa16■□□□□ 0.15
NCKIPSD-202ENST00000413374 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
NCKIPSD-202ENST00000413374 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
NCKIPSD-202ENST00000413374 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
NCKIPSD-202ENST00000413374 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-202ENST00000413374 HECW2Q9P2P5 1572 aa15.98■□□□□ 0.15
NCKIPSD-202ENST00000413374 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
NCKIPSD-202ENST00000413374 ITSN2Q9NZM3 1697 aa15.97■□□□□ 0.15
NCKIPSD-202ENST00000413374 DIP2CQ9Y2E4 1556 aa15.96■□□□□ 0.15
NCKIPSD-202ENST00000413374 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
NCKIPSD-202ENST00000413374 HSPA2P54652 639 aa15.95■□□□□ 0.14
NCKIPSD-202ENST00000413374 ABCA6Q8N139 1617 aa15.94■□□□□ 0.14
NCKIPSD-202ENST00000413374 GGT6Q6P531 493 aa15.94■□□□□ 0.14
NCKIPSD-202ENST00000413374 MBD5Q9P267 1494 aa15.94■□□□□ 0.14
NCKIPSD-202ENST00000413374 TSPY4P0CV99 314 aa15.92■□□□□ 0.14
NCKIPSD-202ENST00000413374 TSPY10P0CW01 314 aa15.92■□□□□ 0.14
NCKIPSD-202ENST00000413374 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-202ENST00000413374 KIDINS220Q9ULH0 1771 aa15.91■□□□□ 0.14
NCKIPSD-202ENST00000413374 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
NCKIPSD-202ENST00000413374 CAMSAP2Q08AD1 1489 aa15.91■□□□□ 0.14
NCKIPSD-202ENST00000413374 ATP7AQ04656 1500 aa15.89■□□□□ 0.13
NCKIPSD-202ENST00000413374 A2MP01023 1474 aa15.89■□□□□ 0.13
NCKIPSD-202ENST00000413374 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
NCKIPSD-202ENST00000413374 KIF3BO15066 747 aa15.87■□□□□ 0.13
NCKIPSD-202ENST00000413374 AGLP35573 1532 aa15.87■□□□□ 0.13
NCKIPSD-202ENST00000413374 REREQ9P2R6 1566 aa15.87■□□□□ 0.13
NCKIPSD-202ENST00000413374 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 LMTK3Q96Q04 1460 aa15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 PPARGC1BQ86YN6 1023 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 FER1L4A9Z1Z3 1794 aa15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
NCKIPSD-202ENST00000413374 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
NCKIPSD-202ENST00000413374 INO80Q9ULG1 1556 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-202ENST00000413374 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
NCKIPSD-202ENST00000413374 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
NCKIPSD-202ENST00000413374 CNTLNQ9NXG0 1405 aa15.79■□□□□ 0.12
NCKIPSD-202ENST00000413374 FAM50AQ14320 339 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-202ENST00000413374 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
NCKIPSD-202ENST00000413374 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.12
NCKIPSD-202ENST00000413374 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
NCKIPSD-202ENST00000413374 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.11
NCKIPSD-202ENST00000413374 PLXNC1O60486 1568 aa15.76■□□□□ 0.11
NCKIPSD-202ENST00000413374 FBXO31Q5XUX0 539 aaPredicted RBP15.76■□□□□ 0.11
NCKIPSD-202ENST00000413374 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
NCKIPSD-202ENST00000413374 ILDR1Q86SU0 546 aaPredicted RBP15.75■□□□□ 0.11
NCKIPSD-202ENST00000413374 ABCC5O15440 1437 aa15.74■□□□□ 0.11
NCKIPSD-202ENST00000413374 FGD6Q6ZV73 1430 aa15.74■□□□□ 0.11
NCKIPSD-202ENST00000413374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.113e-6■■□□□ 13.5
NCKIPSD-202ENST00000413374 C3P01024 1663 aa15.72■□□□□ 0.11
NCKIPSD-202ENST00000413374 ADGBQ8N7X0 1667 aa15.72■□□□□ 0.11
NCKIPSD-202ENST00000413374 PTPN23Q9H3S7 1636 aa15.7■□□□□ 0.1
NCKIPSD-202ENST00000413374 CLTCQ00610 1675 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-202ENST00000413374 DAPK1P53355 1430 aa15.69■□□□□ 0.1
NCKIPSD-202ENST00000413374 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
NCKIPSD-202ENST00000413374 KIF15Q9NS87 1388 aa15.69■□□□□ 0.1
NCKIPSD-202ENST00000413374 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms