RNA–Protein interactions for RNA: ENST00000412074.6

CHRNB4-202, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNB4, Length 1,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-202ENST00000412074 AKNAQ7Z591 1439 aa28.25■■■□□ 2.11
CHRNB4-202ENST00000412074 NEO1Q92859 1461 aa28.24■■■□□ 2.11
CHRNB4-202ENST00000412074 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
CHRNB4-202ENST00000412074 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
CHRNB4-202ENST00000412074 PHLDB1Q86UU1 1377 aa28.21■■■□□ 2.11
CHRNB4-202ENST00000412074 PREX2Q70Z35 1606 aa28.21■■■□□ 2.11
CHRNB4-202ENST00000412074 COL17A1Q9UMD9 1497 aaPredicted RBP28.21■■■□□ 2.11
CHRNB4-202ENST00000412074 ARAP3Q8WWN8 1544 aa28.2■■■□□ 2.11
CHRNB4-202ENST00000412074 ZNF644Q9H582 1327 aaPredicted RBP28.2■■■□□ 2.1
CHRNB4-202ENST00000412074 RAPGEF3O95398 923 aa28.19■■■□□ 2.1
CHRNB4-202ENST00000412074 SCAPERQ9BY12 1400 aa28.17■■■□□ 2.1
CHRNB4-202ENST00000412074 KDM6BO15054 1643 aa28.16■■■□□ 2.1
CHRNB4-202ENST00000412074 CFAP74Q9C0B2 1584 aa28.16■■■□□ 2.1
CHRNB4-202ENST00000412074 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
CHRNB4-202ENST00000412074 HNRNPMP52272 730 aaKnown RBP eCLIP28.14■■■□□ 2.1
CHRNB4-202ENST00000412074 MYOM3Q5VTT5 1437 aa28.13■■■□□ 2.09
CHRNB4-202ENST00000412074 ITSN2Q9NZM3 1697 aa28.12■■■□□ 2.09
CHRNB4-202ENST00000412074 DENND4BO75064 1496 aaPredicted RBP28.1■■■□□ 2.09
CHRNB4-202ENST00000412074 AFAP1Q8N556 730 aa28.09■■■□□ 2.09
CHRNB4-202ENST00000412074 SAMD9LQ8IVG5 1584 aa28.08■■■□□ 2.09
CHRNB4-202ENST00000412074 ARHGEF12Q9NZN5 1544 aa28.06■■■□□ 2.08
CHRNB4-202ENST00000412074 MIA2Q96PC5 1412 aa28.05■■■□□ 2.08
CHRNB4-202ENST00000412074 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
CHRNB4-202ENST00000412074 FGD6Q6ZV73 1430 aa28.03■■■□□ 2.08
CHRNB4-202ENST00000412074 TRAPPC8Q9Y2L5 1435 aa28.03■■■□□ 2.08
CHRNB4-202ENST00000412074 ABCC1P33527 1531 aa28.03■■■□□ 2.08
CHRNB4-202ENST00000412074 FAM50AQ14320 339 aaKnown RBP28.02■■■□□ 2.08
CHRNB4-202ENST00000412074 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
CHRNB4-202ENST00000412074 PLEKHH2Q8IVE3 1493 aa28.02■■■□□ 2.08
CHRNB4-202ENST00000412074 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.07
CHRNB4-202ENST00000412074 KIAA1107Q9UPP5 1409 aa28.01■■■□□ 2.07
CHRNB4-202ENST00000412074 POGZQ7Z3K3 1410 aa28■■■□□ 2.07
CHRNB4-202ENST00000412074 FRMPD1Q5SYB0 1578 aa27.96■■■□□ 2.07
CHRNB4-202ENST00000412074 PTPN23Q9H3S7 1636 aa27.95■■■□□ 2.07
CHRNB4-202ENST00000412074 ZNF518AQ6AHZ1 1483 aa27.95■■■□□ 2.06
CHRNB4-202ENST00000412074 MBD5Q9P267 1494 aa27.95■■■□□ 2.06
CHRNB4-202ENST00000412074 RICTORQ6R327 1708 aa27.94■■■□□ 2.06
CHRNB4-202ENST00000412074 RSPH4AQ5TD94 716 aa27.92■■■□□ 2.06
CHRNB4-202ENST00000412074 SPAG9O60271 1321 aaKnown RBP27.92■■■□□ 2.06
CHRNB4-202ENST00000412074 TCOF1Q13428 1488 aaKnown RBP27.89■■■□□ 2.06
CHRNB4-202ENST00000412074 TSPY4P0CV99 314 aa27.89■■■□□ 2.06
CHRNB4-202ENST00000412074 TSPY10P0CW01 314 aa27.89■■■□□ 2.06
CHRNB4-202ENST00000412074 ITGAEP38570 1179 aa27.86■■■□□ 2.05
CHRNB4-202ENST00000412074 CCDC141Q6ZP82 1450 aa27.85■■■□□ 2.05
CHRNB4-202ENST00000412074 YEATS2Q9ULM3 1422 aa27.85■■■□□ 2.05
CHRNB4-202ENST00000412074 KDM5CP41229 1560 aa27.84■■■□□ 2.05
CHRNB4-202ENST00000412074 ZMYM4Q5VZL5 1548 aa27.83■■■□□ 2.05
CHRNB4-202ENST00000412074 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
CHRNB4-202ENST00000412074 ABCC5O15440 1437 aa27.82■■■□□ 2.04
CHRNB4-202ENST00000412074 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
CHRNB4-202ENST00000412074 MAGI2Q86UL8 1455 aa27.81■■■□□ 2.04
CHRNB4-202ENST00000412074 MLH3Q9UHC1 1453 aa27.81■■■□□ 2.04
CHRNB4-202ENST00000412074 ZFYVE16Q7Z3T8 1539 aa27.8■■■□□ 2.04
CHRNB4-202ENST00000412074 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
CHRNB4-202ENST00000412074 DAPK1P53355 1430 aa27.79■■■□□ 2.04
CHRNB4-202ENST00000412074 HECW2Q9P2P5 1572 aa27.78■■■□□ 2.04
CHRNB4-202ENST00000412074 ARID4BQ4LE39 1312 aaPredicted RBP27.74■■■□□ 2.03
CHRNB4-202ENST00000412074 ATP7AQ04656 1500 aa27.74■■■□□ 2.03
CHRNB4-202ENST00000412074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.03
CHRNB4-202ENST00000412074 RTEL1-TNFRSF6BF6WH68 1400 aa27.74■■■□□ 2.03
CHRNB4-202ENST00000412074 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
CHRNB4-202ENST00000412074 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
CHRNB4-202ENST00000412074 ATP10AO60312 1499 aa27.73■■■□□ 2.03
CHRNB4-202ENST00000412074 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
CHRNB4-202ENST00000412074 ARHGEF40Q8TER5 1519 aa27.72■■■□□ 2.03
CHRNB4-202ENST00000412074 RRP7BPQ9NSQ0 103 aa27.71■■■□□ 2.03
CHRNB4-202ENST00000412074 PTPRKQ15262 1439 aa27.69■■■□□ 2.02
CHRNB4-202ENST00000412074 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
CHRNB4-202ENST00000412074 DIP2CQ9Y2E4 1556 aa27.68■■■□□ 2.02
CHRNB4-202ENST00000412074 ABCA6Q8N139 1617 aa27.68■■■□□ 2.02
CHRNB4-202ENST00000412074 MLECQ14165 292 aa27.65■■■□□ 2.02
CHRNB4-202ENST00000412074 MAST1Q9Y2H9 1570 aa27.65■■■□□ 2.02
CHRNB4-202ENST00000412074 SHANK2Q9UPX8 1470 aa27.65■■■□□ 2.02
CHRNB4-202ENST00000412074 ANKRD30AQ9BXX3 1397 aa27.63■■■□□ 2.01
CHRNB4-202ENST00000412074 CROCC2H7BZ55 1655 aa27.63■■■□□ 2.01
CHRNB4-202ENST00000412074 A2MP01023 1474 aa27.62■■■□□ 2.01
CHRNB4-202ENST00000412074 DHX29Q7Z478 1369 aaKnown RBP27.61■■■□□ 2.01
CHRNB4-202ENST00000412074 KIF15Q9NS87 1388 aa27.59■■■□□ 2.01
CHRNB4-202ENST00000412074 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
CHRNB4-202ENST00000412074 SIGLEC1Q9BZZ2 1709 aa27.57■■■□□ 2
CHRNB4-202ENST00000412074 KIF3BO15066 747 aa27.56■■■□□ 2
CHRNB4-202ENST00000412074 ADGBQ8N7X0 1667 aa27.54■■■□□ 2
CHRNB4-202ENST00000412074 ADGRL2O95490 1459 aa27.53■■■□□ 2
CHRNB4-202ENST00000412074 GGT6Q6P531 493 aa27.53■■■□□ 2
CHRNB4-202ENST00000412074 PLXNC1O60486 1568 aa27.53■■■□□ 2
CHRNB4-202ENST00000412074 REREQ9P2R6 1566 aa27.53■■■□□ 2
CHRNB4-202ENST00000412074 ROCK1Q13464 1354 aa27.51■■■□□ 2
CHRNB4-202ENST00000412074 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
CHRNB4-202ENST00000412074 KDM4FA0A1W2PPD8 638 aa27.49■■□□□ 1.99
CHRNB4-202ENST00000412074 AGLP35573 1532 aa27.48■■□□□ 1.99
CHRNB4-202ENST00000412074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.98
CHRNB4-202ENST00000412074 ANKRD50Q9ULJ7 1429 aa27.43■■□□□ 1.98
CHRNB4-202ENST00000412074 ESF1Q9H501 851 aaKnown RBP27.42■■□□□ 1.98
CHRNB4-202ENST00000412074 BCORL1Q5H9F3 1711 aa27.42■■□□□ 1.98
CHRNB4-202ENST00000412074 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
CHRNB4-202ENST00000412074 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.98
CHRNB4-202ENST00000412074 TRIM26Q12899 539 aaPredicted RBP27.38■■□□□ 1.97
CHRNB4-202ENST00000412074 NAIPQ13075 1403 aa27.37■■□□□ 1.97
CHRNB4-202ENST00000412074 WASHC2CQ9Y4E1 1318 aa27.34■■□□□ 1.97
CHRNB4-202ENST00000412074 ADAMTSL3P82987 1691 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms