RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
KDM3A-203ENST00000409556 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.78
KDM3A-203ENST00000409556 MAPK8IP3Q9UPT6 1336 aa19.89■□□□□ 0.77
KDM3A-203ENST00000409556 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
KDM3A-203ENST00000409556 CC2D1BQ5T0F9 858 aaKnown RBP19.86■□□□□ 0.77
KDM3A-203ENST00000409556 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
KDM3A-203ENST00000409556 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
KDM3A-203ENST00000409556 ROCK2O75116 1388 aaKnown RBP19.84■□□□□ 0.77
KDM3A-203ENST00000409556 CUX1P39880 1505 aa19.83■□□□□ 0.77
KDM3A-203ENST00000409556 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
KDM3A-203ENST00000409556 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.76
KDM3A-203ENST00000409556 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
KDM3A-203ENST00000409556 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
KDM3A-203ENST00000409556 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
KDM3A-203ENST00000409556 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
KDM3A-203ENST00000409556 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
KDM3A-203ENST00000409556 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
KDM3A-203ENST00000409556 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
KDM3A-203ENST00000409556 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
KDM3A-203ENST00000409556 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
KDM3A-203ENST00000409556 SOX12O15370 315 aa19.79■□□□□ 0.76
KDM3A-203ENST00000409556 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
KDM3A-203ENST00000409556 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
KDM3A-203ENST00000409556 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
KDM3A-203ENST00000409556 PNNQ9H307 717 aaKnown RBP19.78■□□□□ 0.76
KDM3A-203ENST00000409556 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
KDM3A-203ENST00000409556 EIF3AQ14152 1382 aaKnown RBP19.77■□□□□ 0.76
KDM3A-203ENST00000409556 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.75
KDM3A-203ENST00000409556 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
KDM3A-203ENST00000409556 NUTM2DQ5VT03 806 aaPredicted RBP19.75■□□□□ 0.75
KDM3A-203ENST00000409556 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
KDM3A-203ENST00000409556 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
KDM3A-203ENST00000409556 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
KDM3A-203ENST00000409556 ARXQ96QS3 562 aa19.74■□□□□ 0.75
KDM3A-203ENST00000409556 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
KDM3A-203ENST00000409556 MYT1Q01538 1121 aa19.73■□□□□ 0.75
KDM3A-203ENST00000409556 KIF21BO75037 1637 aa19.73■□□□□ 0.75
KDM3A-203ENST00000409556 PAK3O75914 559 aaPredicted RBP19.71■□□□□ 0.75
KDM3A-203ENST00000409556 HSP90AA1P07900 732 aaKnown RBP19.69■□□□□ 0.74
KDM3A-203ENST00000409556 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
KDM3A-203ENST00000409556 FGD6Q6ZV73 1430 aa19.69■□□□□ 0.74
KDM3A-203ENST00000409556 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
KDM3A-203ENST00000409556 PRXQ9BXM0 1461 aa19.69■□□□□ 0.74
KDM3A-203ENST00000409556 VGFO15240 615 aaPredicted RBP19.68■□□□□ 0.74
KDM3A-203ENST00000409556 IRX6P78412 446 aaPredicted RBP19.67■□□□□ 0.74
KDM3A-203ENST00000409556 KIF15Q9NS87 1388 aa19.66■□□□□ 0.74
KDM3A-203ENST00000409556 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
KDM3A-203ENST00000409556 LRRC9Q6ZRR7 1453 aa19.65■□□□□ 0.74
KDM3A-203ENST00000409556 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
KDM3A-203ENST00000409556 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
KDM3A-203ENST00000409556 EFCAB5A4FU69 1503 aa19.65■□□□□ 0.74
KDM3A-203ENST00000409556 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
KDM3A-203ENST00000409556 FTSJ3Q8IY81 847 aaKnown RBP19.64■□□□□ 0.73
KDM3A-203ENST00000409556 TRAK1Q9UPV9 953 aa19.62■□□□□ 0.73
KDM3A-203ENST00000409556 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
KDM3A-203ENST00000409556 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
KDM3A-203ENST00000409556 NGDNQ8NEJ9 315 aaKnown RBP19.61■□□□□ 0.73
KDM3A-203ENST00000409556 ARHGAP5Q13017 1502 aa19.61■□□□□ 0.73
KDM3A-203ENST00000409556 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
KDM3A-203ENST00000409556 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
KDM3A-203ENST00000409556 PHLDB1Q86UU1 1377 aa19.6■□□□□ 0.73
KDM3A-203ENST00000409556 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
KDM3A-203ENST00000409556 UNC13AQ9UPW8 1703 aa19.58■□□□□ 0.73
KDM3A-203ENST00000409556 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.72
KDM3A-203ENST00000409556 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
KDM3A-203ENST00000409556 RTF1Q92541 710 aaKnown RBP19.56■□□□□ 0.72
KDM3A-203ENST00000409556 RALBP1Q15311 655 aa19.55■□□□□ 0.72
KDM3A-203ENST00000409556 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
KDM3A-203ENST00000409556 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
KDM3A-203ENST00000409556 NUTM2FA1L443 756 aa19.54■□□□□ 0.72
KDM3A-203ENST00000409556 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
KDM3A-203ENST00000409556 NPHP1O15259 732 aa19.53■□□□□ 0.72
KDM3A-203ENST00000409556 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
KDM3A-203ENST00000409556 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.726e-7■□□□□ 10.6
KDM3A-203ENST00000409556 MS4A1P11836 297 aa19.53■□□□□ 0.72
KDM3A-203ENST00000409556 CHMP4BQ9H444 224 aaKnown RBP19.53■□□□□ 0.72
KDM3A-203ENST00000409556 TROQ12816 1431 aaPredicted RBP19.52■□□□□ 0.72
KDM3A-203ENST00000409556 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
KDM3A-203ENST00000409556 MAGI1Q96QZ7 1491 aaPredicted RBP19.51■□□□□ 0.71
KDM3A-203ENST00000409556 ST20-MTHFSA0A0A6YYL1 179 aa19.5■□□□□ 0.71
KDM3A-203ENST00000409556 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
KDM3A-203ENST00000409556 SUPT16HQ9Y5B9 1047 aaKnown RBP19.49■□□□□ 0.71
KDM3A-203ENST00000409556 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
KDM3A-203ENST00000409556 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
KDM3A-203ENST00000409556 EVC2Q86UK5 1308 aa19.46■□□□□ 0.71
KDM3A-203ENST00000409556 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
KDM3A-203ENST00000409556 IQGAP2Q13576 1575 aa19.45■□□□□ 0.7
KDM3A-203ENST00000409556 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
KDM3A-203ENST00000409556 GRIN2AQ12879 1464 aa19.45■□□□□ 0.7
KDM3A-203ENST00000409556 CALD1Q05682 793 aaKnown RBP19.45■□□□□ 0.7
KDM3A-203ENST00000409556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.44■□□□□ 0.7
KDM3A-203ENST00000409556 CCDC9Q9Y3X0 531 aaKnown RBP19.44■□□□□ 0.7
KDM3A-203ENST00000409556 AMPHP49418 695 aa19.43■□□□□ 0.7
KDM3A-203ENST00000409556 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
KDM3A-203ENST00000409556 MINK1Q8N4C8 1332 aaPredicted RBP19.42■□□□□ 0.7
KDM3A-203ENST00000409556 CUL7Q14999 1698 aa19.42■□□□□ 0.7
KDM3A-203ENST00000409556 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
KDM3A-203ENST00000409556 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
KDM3A-203ENST00000409556 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
KDM3A-203ENST00000409556 NLRP13Q86W25 1043 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms