RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
NIF3L1-204ENST00000409357 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
NIF3L1-204ENST00000409357 LRRIQ1Q96JM4 1722 aa15.25■□□□□ 0.03
NIF3L1-204ENST00000409357 TEX14Q8IWB6 1497 aa15.25■□□□□ 0.03
NIF3L1-204ENST00000409357 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
NIF3L1-204ENST00000409357 MAGI3Q5TCQ9 1506 aa15.24■□□□□ 0.03
NIF3L1-204ENST00000409357 HECW1Q76N89 1606 aa15.21■□□□□ 0.03
NIF3L1-204ENST00000409357 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
NIF3L1-204ENST00000409357 FMN1Q68DA7 1419 aa15.21■□□□□ 0.03
NIF3L1-204ENST00000409357 PCF11O94913 1555 aaKnown RBP15.19■□□□□ 0.02
NIF3L1-204ENST00000409357 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
NIF3L1-204ENST00000409357 ZBTB22O15209 634 aa15.18■□□□□ 0.02
NIF3L1-204ENST00000409357 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
NIF3L1-204ENST00000409357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.02
NIF3L1-204ENST00000409357 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-204ENST00000409357 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
NIF3L1-204ENST00000409357 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
NIF3L1-204ENST00000409357 CLIP1P30622 1438 aa15.15■□□□□ 0.02
NIF3L1-204ENST00000409357 PLEKHD1A6NEE1 506 aa15.14■□□□□ 0.01
NIF3L1-204ENST00000409357 KIF14Q15058 1648 aa15.13■□□□□ 0.01
NIF3L1-204ENST00000409357 ARAP3Q8WWN8 1544 aa15.11■□□□□ 0.01
NIF3L1-204ENST00000409357 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
NIF3L1-204ENST00000409357 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
NIF3L1-204ENST00000409357 NEO1Q92859 1461 aa15.09■□□□□ 0.01
NIF3L1-204ENST00000409357 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
NIF3L1-204ENST00000409357 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
NIF3L1-204ENST00000409357 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
NIF3L1-204ENST00000409357 FANCAO15360 1455 aa15.07■□□□□ 0
NIF3L1-204ENST00000409357 RAPGEF3O95398 923 aa15.06■□□□□ 0
NIF3L1-204ENST00000409357 TROQ12816 1431 aaPredicted RBP15.06■□□□□ 0
NIF3L1-204ENST00000409357 MYO5CQ9NQX4 1742 aa15.06■□□□□ 0
NIF3L1-204ENST00000409357 RICTORQ6R327 1708 aa15.05■□□□□ -0
NIF3L1-204ENST00000409357 ADGRL1O94910 1474 aa15.05■□□□□ -0
NIF3L1-204ENST00000409357 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
NIF3L1-204ENST00000409357 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
NIF3L1-204ENST00000409357 AKNAQ7Z591 1439 aa15.03■□□□□ -0
NIF3L1-204ENST00000409357 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
NIF3L1-204ENST00000409357 PLCH2O75038 1416 aa15.02□□□□□ -0.01
NIF3L1-204ENST00000409357 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
NIF3L1-204ENST00000409357 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
NIF3L1-204ENST00000409357 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
NIF3L1-204ENST00000409357 MSH5O43196 834 aa15□□□□□ -0.01
NIF3L1-204ENST00000409357 DENND4BO75064 1496 aaPredicted RBP14.98□□□□□ -0.01
NIF3L1-204ENST00000409357 PREX2Q70Z35 1606 aa14.98□□□□□ -0.01
NIF3L1-204ENST00000409357 CDC42BPAQ5VT25 1732 aa14.98□□□□□ -0.01
NIF3L1-204ENST00000409357 SIGLEC1Q9BZZ2 1709 aa14.97□□□□□ -0.01
NIF3L1-204ENST00000409357 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
NIF3L1-204ENST00000409357 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
NIF3L1-204ENST00000409357 NEFLP07196 543 aa14.97□□□□□ -0.01
NIF3L1-204ENST00000409357 ZMYM4Q5VZL5 1548 aa14.96□□□□□ -0.02
NIF3L1-204ENST00000409357 FKBP8Q14318 412 aa14.95□□□□□ -0.02
NIF3L1-204ENST00000409357 POGZQ7Z3K3 1410 aa14.95□□□□□ -0.02
NIF3L1-204ENST00000409357 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
NIF3L1-204ENST00000409357 DHX57Q6P158 1386 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-204ENST00000409357 YEATS2Q9ULM3 1422 aa14.94□□□□□ -0.02
NIF3L1-204ENST00000409357 EFCAB2Q5VUJ9 269 aa14.91□□□□□ -0.02
NIF3L1-204ENST00000409357 ZFYVE16Q7Z3T8 1539 aa14.9□□□□□ -0.02
NIF3L1-204ENST00000409357 ARHGEF12Q9NZN5 1544 aa14.9□□□□□ -0.02
NIF3L1-204ENST00000409357 ABCC1P33527 1531 aa14.9□□□□□ -0.02
NIF3L1-204ENST00000409357 ITSN2Q9NZM3 1697 aa14.89□□□□□ -0.03
NIF3L1-204ENST00000409357 KDM5CP41229 1560 aa14.89□□□□□ -0.03
NIF3L1-204ENST00000409357 BCORL1Q5H9F3 1711 aa14.89□□□□□ -0.03
NIF3L1-204ENST00000409357 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
NIF3L1-204ENST00000409357 ADAMTSL3P82987 1691 aa14.89□□□□□ -0.03
NIF3L1-204ENST00000409357 CCER2I3L3R5 266 aa14.88□□□□□ -0.03
NIF3L1-204ENST00000409357 SAMD9LQ8IVG5 1584 aa14.88□□□□□ -0.03
NIF3L1-204ENST00000409357 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
NIF3L1-204ENST00000409357 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
NIF3L1-204ENST00000409357 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
NIF3L1-204ENST00000409357 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
NIF3L1-204ENST00000409357 DEKP35659 375 aaKnown RBP14.87□□□□□ -0.03
NIF3L1-204ENST00000409357 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
NIF3L1-204ENST00000409357 ZNF518AQ6AHZ1 1483 aa14.86□□□□□ -0.03
NIF3L1-204ENST00000409357 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
NIF3L1-204ENST00000409357 MADDQ8WXG6 1647 aa14.86□□□□□ -0.03
NIF3L1-204ENST00000409357 MAGI2Q86UL8 1455 aa14.85□□□□□ -0.03
NIF3L1-204ENST00000409357 SYCP2Q9BX26 1530 aa14.85□□□□□ -0.03
NIF3L1-204ENST00000409357 HECW2Q9P2P5 1572 aa14.84□□□□□ -0.03
NIF3L1-204ENST00000409357 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
NIF3L1-204ENST00000409357 ARID4BQ4LE39 1312 aaPredicted RBP14.83□□□□□ -0.04
NIF3L1-204ENST00000409357 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
NIF3L1-204ENST00000409357 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
NIF3L1-204ENST00000409357 CCNB3Q8WWL7 1395 aa14.82□□□□□ -0.04
NIF3L1-204ENST00000409357 KIDINS220Q9ULH0 1771 aa14.81□□□□□ -0.04
NIF3L1-204ENST00000409357 RIMS1Q86UR5 1692 aaKnown RBP14.81□□□□□ -0.04
NIF3L1-204ENST00000409357 UBE2Q2Q8WVN8 375 aa14.81□□□□□ -0.04
NIF3L1-204ENST00000409357 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
NIF3L1-204ENST00000409357 ATP10AO60312 1499 aa14.8□□□□□ -0.04
NIF3L1-204ENST00000409357 PTPRMP28827 1452 aa14.8□□□□□ -0.04
NIF3L1-204ENST00000409357 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
NIF3L1-204ENST00000409357 BCANQ96GW7 911 aa14.79□□□□□ -0.04
NIF3L1-204ENST00000409357 ZNF644Q9H582 1327 aaPredicted RBP14.79□□□□□ -0.04
NIF3L1-204ENST00000409357 C9orf84Q5VXU9 1444 aa14.79□□□□□ -0.04
NIF3L1-204ENST00000409357 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
NIF3L1-204ENST00000409357 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
NIF3L1-204ENST00000409357 LRRC9Q6ZRR7 1453 aa14.78□□□□□ -0.04
NIF3L1-204ENST00000409357 FER1L4A9Z1Z3 1794 aa14.77□□□□□ -0.04
NIF3L1-204ENST00000409357 HNRNPMP52272 730 aaKnown RBP eCLIP14.77□□□□□ -0.05
NIF3L1-204ENST00000409357 KANK4Q5T7N3 995 aaPredicted RBP14.77□□□□□ -0.05
NIF3L1-204ENST00000409357 MLECQ14165 292 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms