RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
GPC3-203ENST00000406757 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
GPC3-203ENST00000406757 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
GPC3-203ENST00000406757 PTPRMP28827 1452 aa13.13□□□□□ -0.31
GPC3-203ENST00000406757 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
GPC3-203ENST00000406757 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
GPC3-203ENST00000406757 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
GPC3-203ENST00000406757 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
GPC3-203ENST00000406757 PCF11O94913 1555 aaKnown RBP13.11□□□□□ -0.31
GPC3-203ENST00000406757 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
GPC3-203ENST00000406757 AKNAQ7Z591 1439 aa13.08□□□□□ -0.32
GPC3-203ENST00000406757 CASKIN1Q8WXD9 1431 aa13.08□□□□□ -0.32
GPC3-203ENST00000406757 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
GPC3-203ENST00000406757 FANCAO15360 1455 aa13.08□□□□□ -0.32
GPC3-203ENST00000406757 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
GPC3-203ENST00000406757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.32
GPC3-203ENST00000406757 APLP2Q06481 763 aa13.06□□□□□ -0.32
GPC3-203ENST00000406757 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
GPC3-203ENST00000406757 TTC37Q6PGP7 1564 aa13.06□□□□□ -0.32
GPC3-203ENST00000406757 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
GPC3-203ENST00000406757 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
GPC3-203ENST00000406757 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
GPC3-203ENST00000406757 CFAP74Q9C0B2 1584 aa13.04□□□□□ -0.32
GPC3-203ENST00000406757 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
GPC3-203ENST00000406757 LRRIQ1Q96JM4 1722 aa13.04□□□□□ -0.32
GPC3-203ENST00000406757 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
GPC3-203ENST00000406757 YEATS2Q9ULM3 1422 aa13.03□□□□□ -0.32
GPC3-203ENST00000406757 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.32
GPC3-203ENST00000406757 LMTK3Q96Q04 1460 aa13.02□□□□□ -0.33
GPC3-203ENST00000406757 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
GPC3-203ENST00000406757 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
GPC3-203ENST00000406757 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
GPC3-203ENST00000406757 FBXO41Q8TF61 875 aa13□□□□□ -0.33
GPC3-203ENST00000406757 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
GPC3-203ENST00000406757 PLCH2O75038 1416 aa12.99□□□□□ -0.33
GPC3-203ENST00000406757 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
GPC3-203ENST00000406757 SCAPERQ9BY12 1400 aa12.99□□□□□ -0.33
GPC3-203ENST00000406757 MLECQ14165 292 aa12.99□□□□□ -0.33
GPC3-203ENST00000406757 HSPA2P54652 639 aa12.98□□□□□ -0.33
GPC3-203ENST00000406757 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
GPC3-203ENST00000406757 KCNA4P22459 653 aa12.97□□□□□ -0.33
GPC3-203ENST00000406757 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
GPC3-203ENST00000406757 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
GPC3-203ENST00000406757 EFCAB2Q5VUJ9 269 aa12.94□□□□□ -0.34
GPC3-203ENST00000406757 CDK11AQ9UQ88 783 aaPredicted RBP12.94□□□□□ -0.34
GPC3-203ENST00000406757 KIF14Q15058 1648 aa12.93□□□□□ -0.34
GPC3-203ENST00000406757 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
GPC3-203ENST00000406757 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
GPC3-203ENST00000406757 MTUS2Q5JR59 1369 aa12.93□□□□□ -0.34
GPC3-203ENST00000406757 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
GPC3-203ENST00000406757 DSG3P32926 999 aa12.92□□□□□ -0.34
GPC3-203ENST00000406757 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
GPC3-203ENST00000406757 ATP10AO60312 1499 aa12.91□□□□□ -0.34
GPC3-203ENST00000406757 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
GPC3-203ENST00000406757 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
GPC3-203ENST00000406757 MAP3K1Q13233 1512 aa12.91□□□□□ -0.34
GPC3-203ENST00000406757 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
GPC3-203ENST00000406757 CAPN15O75808 1086 aa12.9□□□□□ -0.34
GPC3-203ENST00000406757 AFAP1Q8N556 730 aa12.9□□□□□ -0.34
GPC3-203ENST00000406757 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
GPC3-203ENST00000406757 CEBPAP49715 358 aaPredicted RBP12.89□□□□□ -0.35
GPC3-203ENST00000406757 MYT1LQ9UL68 1186 aa12.89□□□□□ -0.35
GPC3-203ENST00000406757 ZNF518AQ6AHZ1 1483 aa12.89□□□□□ -0.35
GPC3-203ENST00000406757 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
GPC3-203ENST00000406757 KDM5CP41229 1560 aa12.86□□□□□ -0.35
GPC3-203ENST00000406757 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
GPC3-203ENST00000406757 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
GPC3-203ENST00000406757 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
GPC3-203ENST00000406757 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
GPC3-203ENST00000406757 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
GPC3-203ENST00000406757 TRAPPC8Q9Y2L5 1435 aa12.82□□□□□ -0.36
GPC3-203ENST00000406757 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
GPC3-203ENST00000406757 ABCA6Q8N139 1617 aa12.81□□□□□ -0.36
GPC3-203ENST00000406757 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
GPC3-203ENST00000406757 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
GPC3-203ENST00000406757 ABCC1P33527 1531 aa12.8□□□□□ -0.36
GPC3-203ENST00000406757 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
GPC3-203ENST00000406757 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
GPC3-203ENST00000406757 REREQ9P2R6 1566 aa12.79□□□□□ -0.36
GPC3-203ENST00000406757 ZNF777Q9ULD5 760 aaPredicted RBP12.79□□□□□ -0.36
GPC3-203ENST00000406757 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
GPC3-203ENST00000406757 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
GPC3-203ENST00000406757 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
GPC3-203ENST00000406757 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
GPC3-203ENST00000406757 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
GPC3-203ENST00000406757 CFDP1Q9UEE9 299 aaPredicted RBP12.76□□□□□ -0.37
GPC3-203ENST00000406757 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
GPC3-203ENST00000406757 AGLP35573 1532 aa12.76□□□□□ -0.37
GPC3-203ENST00000406757 GPATCH8Q9UKJ3 1502 aaKnown RBP12.76□□□□□ -0.37
GPC3-203ENST00000406757 C3P01024 1663 aa12.76□□□□□ -0.37
GPC3-203ENST00000406757 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
GPC3-203ENST00000406757 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
GPC3-203ENST00000406757 KIDINS220Q9ULH0 1771 aa12.75□□□□□ -0.37
GPC3-203ENST00000406757 ITGAEP38570 1179 aa12.74□□□□□ -0.37
GPC3-203ENST00000406757 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■■■□□ 15.6
GPC3-203ENST00000406757 POTEHQ6S545 545 aa12.73□□□□□ -0.37
GPC3-203ENST00000406757 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
GPC3-203ENST00000406757 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
GPC3-203ENST00000406757 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
GPC3-203ENST00000406757 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms