RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 TMF1P82094 1093 aa22.26■■□□□ 1.15
KDSR-202ENST00000406396 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
KDSR-202ENST00000406396 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
KDSR-202ENST00000406396 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
KDSR-202ENST00000406396 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
KDSR-202ENST00000406396 PLCB2Q00722 1185 aa22.24■■□□□ 1.15
KDSR-202ENST00000406396 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
KDSR-202ENST00000406396 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
KDSR-202ENST00000406396 GGT6Q6P531 493 aa22.21■■□□□ 1.15
KDSR-202ENST00000406396 HSPA5P11021 654 aaKnown RBP22.21■■□□□ 1.15
KDSR-202ENST00000406396 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
KDSR-202ENST00000406396 DEKP35659 375 aaKnown RBP22.19■■□□□ 1.14
KDSR-202ENST00000406396 ANKRD30AQ9BXX3 1397 aa22.19■■□□□ 1.14
KDSR-202ENST00000406396 HSCBQ8IWL3 235 aa22.19■■□□□ 1.14
KDSR-202ENST00000406396 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
KDSR-202ENST00000406396 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
KDSR-202ENST00000406396 OS9Q13438 667 aaPredicted RBP22.15■■□□□ 1.14
KDSR-202ENST00000406396 RSPH4AQ5TD94 716 aa22.14■■□□□ 1.14
KDSR-202ENST00000406396 PKD2Q13563 968 aa22.13■■□□□ 1.13
KDSR-202ENST00000406396 FGD1P98174 961 aa22.12■■□□□ 1.13
KDSR-202ENST00000406396 KCNJ4P48050 445 aa22.12■■□□□ 1.13
KDSR-202ENST00000406396 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
KDSR-202ENST00000406396 L1TD1Q5T7N2 865 aaKnown RBP22.1■■□□□ 1.13
KDSR-202ENST00000406396 SPRYD3Q8NCJ5 442 aa22.1■■□□□ 1.13
KDSR-202ENST00000406396 TAOK2Q9UL54 1235 aa22.1■■□□□ 1.13
KDSR-202ENST00000406396 MORC1Q86VD1 984 aa22.09■■□□□ 1.13
KDSR-202ENST00000406396 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
KDSR-202ENST00000406396 LMOD2Q6P5Q4 547 aa22.09■■□□□ 1.13
KDSR-202ENST00000406396 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
KDSR-202ENST00000406396 NUP155O75694 1391 aa22.07■■□□□ 1.12
KDSR-202ENST00000406396 KTN1Q86UP2 1357 aaKnown RBP22.07■■□□□ 1.12
KDSR-202ENST00000406396 GOLGA6L6A8MZA4 724 aa22.07■■□□□ 1.12
KDSR-202ENST00000406396 PTPRGP23470 1445 aa22.07■■□□□ 1.12
KDSR-202ENST00000406396 SPAG9O60271 1321 aaKnown RBP22.05■■□□□ 1.12
KDSR-202ENST00000406396 GOLGA6L4A6NEF3 574 aa22.04■■□□□ 1.12
KDSR-202ENST00000406396 FOXD1Q16676 465 aa22.04■■□□□ 1.12
KDSR-202ENST00000406396 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
KDSR-202ENST00000406396 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
KDSR-202ENST00000406396 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
KDSR-202ENST00000406396 NAP1L2Q9ULW6 460 aaPredicted RBP22.03■■□□□ 1.12
KDSR-202ENST00000406396 NRDCO43847 1150 aa22.02■■□□□ 1.12
KDSR-202ENST00000406396 MSNP26038 577 aaKnown RBP22.02■■□□□ 1.12
KDSR-202ENST00000406396 MPHOSPH9Q99550 1183 aa22.01■■□□□ 1.11
KDSR-202ENST00000406396 KIF3BO15066 747 aa22.01■■□□□ 1.11
KDSR-202ENST00000406396 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
KDSR-202ENST00000406396 MCCP23508 829 aa22.01■■□□□ 1.11
KDSR-202ENST00000406396 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
KDSR-202ENST00000406396 TCERG1O14776 1098 aaKnown RBP21.98■■□□□ 1.11
KDSR-202ENST00000406396 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
KDSR-202ENST00000406396 CHAF1AQ13111 956 aaPredicted RBP21.98■■□□□ 1.11
KDSR-202ENST00000406396 TSHZ2Q9NRE2 1034 aa21.97■■□□□ 1.11
KDSR-202ENST00000406396 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
KDSR-202ENST00000406396 CFAP44Q96MT7 982 aa21.97■■□□□ 1.11
KDSR-202ENST00000406396 SOX12O15370 315 aa21.96■■□□□ 1.11
KDSR-202ENST00000406396 TULP1O00294 542 aaPredicted RBP21.96■■□□□ 1.11
KDSR-202ENST00000406396 RALBP1Q15311 655 aa21.96■■□□□ 1.11
KDSR-202ENST00000406396 IGF1RP08069 1367 aa21.95■■□□□ 1.1
KDSR-202ENST00000406396 IPO8O15397 1037 aaKnown RBP21.94■■□□□ 1.1
KDSR-202ENST00000406396 SLKQ9H2G2 1235 aaPredicted RBP21.93■■□□□ 1.1
KDSR-202ENST00000406396 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
KDSR-202ENST00000406396 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
KDSR-202ENST00000406396 APBB1O00213 710 aa21.92■■□□□ 1.1
KDSR-202ENST00000406396 RWDD1Q9H446 243 aaPredicted RBP21.91■■□□□ 1.1
KDSR-202ENST00000406396 STK26Q9P289 416 aa21.91■■□□□ 1.1
KDSR-202ENST00000406396 GBP4Q96PP9 640 aa21.9■■□□□ 1.1
KDSR-202ENST00000406396 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
KDSR-202ENST00000406396 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.1
KDSR-202ENST00000406396 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.1
KDSR-202ENST00000406396 HDGFL2Q7Z4V5 671 aaPredicted RBP21.89■■□□□ 1.09
KDSR-202ENST00000406396 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
KDSR-202ENST00000406396 RTF1Q92541 710 aaKnown RBP21.88■■□□□ 1.09
KDSR-202ENST00000406396 GZF1Q9H116 711 aaPredicted RBP21.88■■□□□ 1.09
KDSR-202ENST00000406396 DRC7Q8IY82 874 aa21.88■■□□□ 1.09
KDSR-202ENST00000406396 EIF3AQ14152 1382 aaKnown RBP21.87■■□□□ 1.09
KDSR-202ENST00000406396 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
KDSR-202ENST00000406396 AQRO60306 1485 aaKnown RBP eCLIP21.86■■□□□ 1.09
KDSR-202ENST00000406396 NPHP1O15259 732 aa21.86■■□□□ 1.09
KDSR-202ENST00000406396 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
KDSR-202ENST00000406396 CFTRP13569 1480 aa21.86■■□□□ 1.09
KDSR-202ENST00000406396 EID1Q9Y6B2 187 aa21.85■■□□□ 1.09
KDSR-202ENST00000406396 IPO9Q96P70 1041 aaKnown RBP21.85■■□□□ 1.09
KDSR-202ENST00000406396 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
KDSR-202ENST00000406396 PTMSP20962 102 aa21.84■■□□□ 1.09
KDSR-202ENST00000406396 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
KDSR-202ENST00000406396 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
KDSR-202ENST00000406396 KIAA1211Q6ZU35 1233 aa21.82■■□□□ 1.08
KDSR-202ENST00000406396 CALD1Q05682 793 aaKnown RBP21.81■■□□□ 1.08
KDSR-202ENST00000406396 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
KDSR-202ENST00000406396 L3MBTL2Q969R5 705 aa21.81■■□□□ 1.08
KDSR-202ENST00000406396 MFAP1P55081 439 aaKnown RBP21.79■■□□□ 1.08
KDSR-202ENST00000406396 NLRP13Q86W25 1043 aa21.77■■□□□ 1.08
KDSR-202ENST00000406396 KIAA2012Q0VF49 1180 aa21.76■■□□□ 1.07
KDSR-202ENST00000406396 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
KDSR-202ENST00000406396 SMC4Q9NTJ3 1288 aa21.75■■□□□ 1.07
KDSR-202ENST00000406396 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
KDSR-202ENST00000406396 GOLGA6L3A6NEY3 463 aa21.74■■□□□ 1.07
KDSR-202ENST00000406396 GNL2Q13823 731 aaKnown RBP21.73■■□□□ 1.07
KDSR-202ENST00000406396 CLUAP1Q96AJ1 413 aa21.73■■□□□ 1.07
KDSR-202ENST00000406396 NESP48681 1621 aa21.72■■□□□ 1.07
KDSR-202ENST00000406396 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms