RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.76■□□□□ 0.111e-19■■■■■ 157.7
KDSR-202ENST00000406396 PTBP1P26599 531 aaKnown RBP eCLIP15.94■□□□□ 0.141e-10■■■■■ 45.3
KDSR-202ENST00000406396 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.441e-10■■■■■ 42
KDSR-202ENST00000406396 PABPC4Q13310 644 aaKnown RBP eCLIP18.87■□□□□ 0.618e-9■■■■□ 20.9
KDSR-202ENST00000406396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.95■□□□□ 0.465e-8■■■■■ 57.9
KDSR-202ENST00000406396 DKC1O60832 514 aaKnown RBP eCLIP19.14■□□□□ 0.655e-8■■■■■ 28.2
KDSR-202ENST00000406396 PPIGQ13427 754 aaKnown RBP eCLIP17.14■□□□□ 0.332e-7■■■□□ 19.2
KDSR-202ENST00000406396 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.715e-7■■■□□ 18.1
KDSR-202ENST00000406396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.04■□□□□ 0.485e-7■■■□□ 17.4
KDSR-202ENST00000406396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.27■□□□□ 0.688e-7■■■■■ 29.8
KDSR-202ENST00000406396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.72□□□□□ -0.215e-6■■■□□ 14.8
KDSR-202ENST00000406396 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.49■□□□□ 0.557e-6■■■■■ 27.5
KDSR-202ENST00000406396 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.5■□□□□ 0.557e-6■□□□□ 9.4
KDSR-202ENST00000406396 XRCC6P12956 609 aaKnown RBP eCLIP19.93■□□□□ 0.789e-6■■■■□ 23.7
Retrieved 14 of 14 RNA–protein pairs in 5.3 ms