RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
HDAC9-203ENST00000406072 JPH4Q96JJ6 628 aa8.22□□□□□ -1.09
HDAC9-203ENST00000406072 GCC2Q8IWJ2 1684 aa8.22□□□□□ -1.09
HDAC9-203ENST00000406072 TROQ12816 1431 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-203ENST00000406072 ADGBQ8N7X0 1667 aa8.21□□□□□ -1.1
HDAC9-203ENST00000406072 CFAP74Q9C0B2 1584 aa8.21□□□□□ -1.1
HDAC9-203ENST00000406072 ATP10BO94823 1461 aa8.21□□□□□ -1.1
HDAC9-203ENST00000406072 DNMT1P26358 1616 aaKnown RBP8.2□□□□□ -1.1
HDAC9-203ENST00000406072 RIMBP3CA6NJZ7 1639 aa8.2□□□□□ -1.1
HDAC9-203ENST00000406072 RIMBP3BA6NNM3 1639 aa8.2□□□□□ -1.1
HDAC9-203ENST00000406072 MYO5CQ9NQX4 1742 aa8.2□□□□□ -1.1
HDAC9-203ENST00000406072 RIMBP3Q9UFD9 1639 aa8.2□□□□□ -1.1
HDAC9-203ENST00000406072 PTPN23Q9H3S7 1636 aa8.19□□□□□ -1.1
HDAC9-203ENST00000406072 ITGAEP38570 1179 aa8.19□□□□□ -1.1
HDAC9-203ENST00000406072 NCOA2Q15596 1464 aa8.19□□□□□ -1.1
HDAC9-203ENST00000406072 SHANK2Q9UPX8 1470 aa8.19□□□□□ -1.1
HDAC9-203ENST00000406072 PLB1Q6P1J6 1458 aa8.19□□□□□ -1.1
HDAC9-203ENST00000406072 ANP32AP39687 249 aaKnown RBP8.18□□□□□ -1.1
HDAC9-203ENST00000406072 CDK13Q14004 1512 aaKnown RBP8.18□□□□□ -1.1
HDAC9-203ENST00000406072 PTPRGP23470 1445 aa8.18□□□□□ -1.1
HDAC9-203ENST00000406072 MYOM3Q5VTT5 1437 aa8.18□□□□□ -1.1
HDAC9-203ENST00000406072 CDC42BPBQ9Y5S2 1711 aa8.18□□□□□ -1.1
HDAC9-203ENST00000406072 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
HDAC9-203ENST00000406072 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
HDAC9-203ENST00000406072 MAP3K4Q9Y6R4 1608 aa8.16□□□□□ -1.1
HDAC9-203ENST00000406072 ADGRL2O95490 1459 aa8.16□□□□□ -1.1
HDAC9-203ENST00000406072 WDR7Q9Y4E6 1490 aa8.16□□□□□ -1.1
HDAC9-203ENST00000406072 CNGB1Q14028 1251 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-203ENST00000406072 FGD6Q6ZV73 1430 aa8.15□□□□□ -1.1
HDAC9-203ENST00000406072 PLXNC1O60486 1568 aa8.15□□□□□ -1.1
HDAC9-203ENST00000406072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.15□□□□□ -1.1
HDAC9-203ENST00000406072 DEKP35659 375 aaKnown RBP8.14□□□□□ -1.11
HDAC9-203ENST00000406072 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
HDAC9-203ENST00000406072 TTC37Q6PGP7 1564 aa8.14□□□□□ -1.11
HDAC9-203ENST00000406072 OSCARQ8IYS5 282 aa8.14□□□□□ -1.11
HDAC9-203ENST00000406072 PLEKHH2Q8IVE3 1493 aa8.13□□□□□ -1.11
HDAC9-203ENST00000406072 GPATCH8Q9UKJ3 1502 aaKnown RBP8.12□□□□□ -1.11
HDAC9-203ENST00000406072 NPM2Q86SE8 214 aaKnown RBP8.12□□□□□ -1.11
HDAC9-203ENST00000406072 PHLDB1Q86UU1 1377 aa8.12□□□□□ -1.11
HDAC9-203ENST00000406072 ROCK1Q13464 1354 aa8.12□□□□□ -1.11
HDAC9-203ENST00000406072 KIAA1107Q9UPP5 1409 aa8.12□□□□□ -1.11
HDAC9-203ENST00000406072 CCNB3Q8WWL7 1395 aa8.12□□□□□ -1.11
HDAC9-203ENST00000406072 SAMD9LQ8IVG5 1584 aa8.11□□□□□ -1.11
HDAC9-203ENST00000406072 ANP32CO43423 234 aa8.11□□□□□ -1.11
HDAC9-203ENST00000406072 ZBTB47Q9UFB7 747 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-203ENST00000406072 ABCC1P33527 1531 aa8.11□□□□□ -1.11
HDAC9-203ENST00000406072 KDM5DQ9BY66 1539 aa8.11□□□□□ -1.11
HDAC9-203ENST00000406072 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-203ENST00000406072 RBM19Q9Y4C8 960 aaKnown RBP8.1□□□□□ -1.11
HDAC9-203ENST00000406072 CCDC136Q96JN2 1154 aa8.1□□□□□ -1.11
HDAC9-203ENST00000406072 EIF2AK4Q9P2K8 1649 aaKnown RBP8.09□□□□□ -1.11
HDAC9-203ENST00000406072 ATP1B4Q9UN42 357 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-203ENST00000406072 INO80Q9ULG1 1556 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-203ENST00000406072 KANK4Q5T7N3 995 aaPredicted RBP8.09□□□□□ -1.12
HDAC9-203ENST00000406072 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.12
HDAC9-203ENST00000406072 CAMSAP2Q08AD1 1489 aa8.08□□□□□ -1.12
HDAC9-203ENST00000406072 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
HDAC9-203ENST00000406072 KDM5CP41229 1560 aa8.08□□□□□ -1.12
HDAC9-203ENST00000406072 DIP2BQ9P265 1576 aa8.08□□□□□ -1.12
HDAC9-203ENST00000406072 TRIM52Q96A61 297 aa8.08□□□□□ -1.12
HDAC9-203ENST00000406072 PLCH2O75038 1416 aa8.08□□□□□ -1.12
HDAC9-203ENST00000406072 HFM1A2PYH4 1435 aa8.07□□□□□ -1.12
HDAC9-203ENST00000406072 REREQ9P2R6 1566 aa8.07□□□□□ -1.12
HDAC9-203ENST00000406072 DEPDC5O75140 1603 aa8.07□□□□□ -1.12
HDAC9-203ENST00000406072 UNC13BO14795 1591 aa8.07□□□□□ -1.12
HDAC9-203ENST00000406072 FAM135AQ9P2D6 1515 aa8.07□□□□□ -1.12
HDAC9-203ENST00000406072 MBD5Q9P267 1494 aa8.06□□□□□ -1.12
HDAC9-203ENST00000406072 MAGI2Q86UL8 1455 aa8.06□□□□□ -1.12
HDAC9-203ENST00000406072 ZMYM4Q5VZL5 1548 aa8.06□□□□□ -1.12
HDAC9-203ENST00000406072 NEO1Q92859 1461 aa8.06□□□□□ -1.12
HDAC9-203ENST00000406072 RTEL1-TNFRSF6BF6WH68 1400 aa8.05□□□□□ -1.12
HDAC9-203ENST00000406072 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-203ENST00000406072 POLR3GLQ9BT43 218 aa8.05□□□□□ -1.12
HDAC9-203ENST00000406072 DAPK1P53355 1430 aa8.05□□□□□ -1.12
HDAC9-203ENST00000406072 KIF13AQ9H1H9 1805 aa8.05□□□□□ -1.12
HDAC9-203ENST00000406072 ASXL2Q76L83 1435 aa8.03□□□□□ -1.12
HDAC9-203ENST00000406072 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
HDAC9-203ENST00000406072 FBLN2P98095 1184 aa8.03□□□□□ -1.12
HDAC9-203ENST00000406072 NEURL4Q96JN8 1562 aa8.03□□□□□ -1.12
HDAC9-203ENST00000406072 ANO8Q9HCE9 1232 aaPredicted RBP8.02□□□□□ -1.12
HDAC9-203ENST00000406072 CCDC141Q6ZP82 1450 aa8.02□□□□□ -1.13
HDAC9-203ENST00000406072 RNF17Q9BXT8 1623 aaKnown RBP8.02□□□□□ -1.13
HDAC9-203ENST00000406072 ABCC5O15440 1437 aa8.02□□□□□ -1.13
HDAC9-203ENST00000406072 ZFYVE16Q7Z3T8 1539 aa8.02□□□□□ -1.13
HDAC9-203ENST00000406072 RSPH4AQ5TD94 716 aa8.01□□□□□ -1.13
HDAC9-203ENST00000406072 VWDEQ8N2E2 1590 aa8.01□□□□□ -1.13
HDAC9-203ENST00000406072 HNRNPUQ00839 825 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC9-203ENST00000406072 DDX10Q13206 875 aaKnown RBP8.01□□□□□ -1.13
HDAC9-203ENST00000406072 IQGAP3Q86VI3 1631 aa8□□□□□ -1.13
HDAC9-203ENST00000406072 FRMPD1Q5SYB0 1578 aa8□□□□□ -1.13
HDAC9-203ENST00000406072 NEFMP07197 916 aa8□□□□□ -1.13
HDAC9-203ENST00000406072 NCBP3Q53F19 620 aaKnown RBP8□□□□□ -1.13
HDAC9-203ENST00000406072 AMER1Q5JTC6 1135 aaPredicted RBP8□□□□□ -1.13
HDAC9-203ENST00000406072 PTPRKQ15262 1439 aa8□□□□□ -1.13
HDAC9-203ENST00000406072 DUOX2Q9NRD8 1548 aa7.99□□□□□ -1.13
HDAC9-203ENST00000406072 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
HDAC9-203ENST00000406072 NAIPQ13075 1403 aa7.99□□□□□ -1.13
HDAC9-203ENST00000406072 ERBINQ96RT1 1412 aa7.99□□□□□ -1.13
HDAC9-203ENST00000406072 ZC3H13Q5T200 1668 aaKnown RBP7.99□□□□□ -1.13
HDAC9-203ENST00000406072 SETD5Q9C0A6 1442 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 678 ms