RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
GSE1-203ENST00000405402 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
GSE1-203ENST00000405402 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
GSE1-203ENST00000405402 CUX1P39880 1505 aa17.96■□□□□ 0.47
GSE1-203ENST00000405402 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
GSE1-203ENST00000405402 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
GSE1-203ENST00000405402 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
GSE1-203ENST00000405402 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
GSE1-203ENST00000405402 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
GSE1-203ENST00000405402 PLIN1O60240 522 aa17.93■□□□□ 0.46
GSE1-203ENST00000405402 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
GSE1-203ENST00000405402 CFTRP13569 1480 aa17.92■□□□□ 0.46
GSE1-203ENST00000405402 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
GSE1-203ENST00000405402 GGT6Q6P531 493 aa17.92■□□□□ 0.46
GSE1-203ENST00000405402 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■■■■ 31.5
GSE1-203ENST00000405402 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
GSE1-203ENST00000405402 KIF7Q2M1P5 1343 aa17.89■□□□□ 0.46
GSE1-203ENST00000405402 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.46
GSE1-203ENST00000405402 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
GSE1-203ENST00000405402 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
GSE1-203ENST00000405402 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
GSE1-203ENST00000405402 TOP2BQ02880 1626 aa17.88■□□□□ 0.45
GSE1-203ENST00000405402 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
GSE1-203ENST00000405402 MYOM3Q5VTT5 1437 aa17.87■□□□□ 0.45
GSE1-203ENST00000405402 NBPF8Q3BBV2 869 aa17.87■□□□□ 0.45
GSE1-203ENST00000405402 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
GSE1-203ENST00000405402 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
GSE1-203ENST00000405402 UACAQ9BZF9 1416 aa17.86■□□□□ 0.45
GSE1-203ENST00000405402 USP47Q96K76 1375 aa17.86■□□□□ 0.45
GSE1-203ENST00000405402 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
GSE1-203ENST00000405402 NCOA2Q15596 1464 aa17.85■□□□□ 0.45
GSE1-203ENST00000405402 PANK3Q9H999 370 aa17.85■□□□□ 0.45
GSE1-203ENST00000405402 STK26Q9P289 416 aa17.85■□□□□ 0.45
GSE1-203ENST00000405402 RALBP1Q15311 655 aa17.84■□□□□ 0.45
GSE1-203ENST00000405402 EXOC6Q8TAG9 804 aa17.84■□□□□ 0.45
GSE1-203ENST00000405402 CFAP53Q96M91 514 aa17.83■□□□□ 0.45
GSE1-203ENST00000405402 KIF3BO15066 747 aa17.83■□□□□ 0.44
GSE1-203ENST00000405402 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
GSE1-203ENST00000405402 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
GSE1-203ENST00000405402 CCDC7Q96M83 1385 aa17.82■□□□□ 0.44
GSE1-203ENST00000405402 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
GSE1-203ENST00000405402 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
GSE1-203ENST00000405402 ZBED9Q6R2W3 1325 aa17.8■□□□□ 0.44
GSE1-203ENST00000405402 MORC1Q86VD1 984 aa17.8■□□□□ 0.44
GSE1-203ENST00000405402 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
GSE1-203ENST00000405402 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
GSE1-203ENST00000405402 POGKQ9P215 609 aa17.8■□□□□ 0.44
GSE1-203ENST00000405402 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
GSE1-203ENST00000405402 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
GSE1-203ENST00000405402 MLECQ14165 292 aa17.77■□□□□ 0.44
GSE1-203ENST00000405402 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.43
GSE1-203ENST00000405402 SOX12O15370 315 aa17.77■□□□□ 0.43
GSE1-203ENST00000405402 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
GSE1-203ENST00000405402 SLC4A3P48751 1232 aa17.76■□□□□ 0.43
GSE1-203ENST00000405402 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
GSE1-203ENST00000405402 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
GSE1-203ENST00000405402 MYBBP1AQ9BQG0 1328 aaKnown RBP17.74■□□□□ 0.43
GSE1-203ENST00000405402 MAPK8IP3Q9UPT6 1336 aa17.74■□□□□ 0.43
GSE1-203ENST00000405402 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
GSE1-203ENST00000405402 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
GSE1-203ENST00000405402 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
GSE1-203ENST00000405402 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
GSE1-203ENST00000405402 U2AF1L5P0DN76 240 aaPredicted RBP17.72■□□□□ 0.43
GSE1-203ENST00000405402 U2AF1Q01081 240 aaKnown RBP eCLIP17.72■□□□□ 0.433e-7■□□□□ 9.6
GSE1-203ENST00000405402 BECN1Q14457 450 aa17.72■□□□□ 0.43
GSE1-203ENST00000405402 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
GSE1-203ENST00000405402 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
GSE1-203ENST00000405402 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
GSE1-203ENST00000405402 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
GSE1-203ENST00000405402 KIF15Q9NS87 1388 aa17.71■□□□□ 0.42
GSE1-203ENST00000405402 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
GSE1-203ENST00000405402 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
GSE1-203ENST00000405402 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
GSE1-203ENST00000405402 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
GSE1-203ENST00000405402 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
GSE1-203ENST00000405402 CRBNQ96SW2 442 aa17.68■□□□□ 0.42
GSE1-203ENST00000405402 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
GSE1-203ENST00000405402 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
GSE1-203ENST00000405402 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
GSE1-203ENST00000405402 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
GSE1-203ENST00000405402 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
GSE1-203ENST00000405402 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
GSE1-203ENST00000405402 KANK1Q14678 1352 aa17.67■□□□□ 0.42
GSE1-203ENST00000405402 PTPRGP23470 1445 aa17.66■□□□□ 0.42
GSE1-203ENST00000405402 NAIPQ13075 1403 aa17.66■□□□□ 0.42
GSE1-203ENST00000405402 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
GSE1-203ENST00000405402 HFM1A2PYH4 1435 aa17.66■□□□□ 0.42
GSE1-203ENST00000405402 APAF1O14727 1248 aa17.65■□□□□ 0.42
GSE1-203ENST00000405402 PDE4AP27815 886 aa17.65■□□□□ 0.42
GSE1-203ENST00000405402 ANKRD50Q9ULJ7 1429 aa17.63■□□□□ 0.41
GSE1-203ENST00000405402 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
GSE1-203ENST00000405402 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
GSE1-203ENST00000405402 ANP32BQ92688 251 aaKnown RBP17.61■□□□□ 0.41
GSE1-203ENST00000405402 APBB1O00213 710 aa17.6■□□□□ 0.41
GSE1-203ENST00000405402 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
GSE1-203ENST00000405402 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
GSE1-203ENST00000405402 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
GSE1-203ENST00000405402 AFAP1Q8N556 730 aa17.59■□□□□ 0.41
GSE1-203ENST00000405402 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
GSE1-203ENST00000405402 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms