RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 ARHGAP5Q13017 1502 aa29.85■■■□□ 2.37
SMTN-204ENST00000404574 FAM69CQ0P6D2 419 aa29.85■■■□□ 2.37
SMTN-204ENST00000404574 TCOF1Q13428 1488 aaKnown RBP29.84■■■□□ 2.37
SMTN-204ENST00000404574 CD109Q6YHK3 1445 aa29.83■■■□□ 2.37
SMTN-204ENST00000404574 EFCAB2Q5VUJ9 269 aa29.83■■■□□ 2.37
SMTN-204ENST00000404574 ZNF644Q9H582 1327 aaPredicted RBP29.82■■■□□ 2.36
SMTN-204ENST00000404574 CDC42BPBQ9Y5S2 1711 aa29.82■■■□□ 2.36
SMTN-204ENST00000404574 GLI2P10070 1586 aa29.81■■■□□ 2.36
SMTN-204ENST00000404574 ARAP3Q8WWN8 1544 aa29.8■■■□□ 2.36
SMTN-204ENST00000404574 ITGAEP38570 1179 aa29.79■■■□□ 2.36
SMTN-204ENST00000404574 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
SMTN-204ENST00000404574 CAMSAP2Q08AD1 1489 aa29.79■■■□□ 2.36
SMTN-204ENST00000404574 FANCAO15360 1455 aa29.73■■■□□ 2.35
SMTN-204ENST00000404574 MAP3K4Q9Y6R4 1608 aa29.71■■■□□ 2.35
SMTN-204ENST00000404574 PLEKHH2Q8IVE3 1493 aa29.71■■■□□ 2.35
SMTN-204ENST00000404574 SAMD9LQ8IVG5 1584 aa29.7■■■□□ 2.35
SMTN-204ENST00000404574 HNRNPMP52272 730 aaKnown RBP eCLIP29.67■■■□□ 2.34
SMTN-204ENST00000404574 KIAA1107Q9UPP5 1409 aa29.66■■■□□ 2.34
SMTN-204ENST00000404574 RSPH4AQ5TD94 716 aa29.65■■■□□ 2.34
SMTN-204ENST00000404574 DAPK1P53355 1430 aa29.63■■■□□ 2.33
SMTN-204ENST00000404574 CFAP74Q9C0B2 1584 aa29.62■■■□□ 2.33
SMTN-204ENST00000404574 DNMT1P26358 1616 aaKnown RBP29.62■■■□□ 2.33
SMTN-204ENST00000404574 ABCC5O15440 1437 aa29.62■■■□□ 2.33
SMTN-204ENST00000404574 AKNAQ7Z591 1439 aa29.62■■■□□ 2.33
SMTN-204ENST00000404574 KIF13AQ9H1H9 1805 aa29.62■■■□□ 2.33
SMTN-204ENST00000404574 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
SMTN-204ENST00000404574 MBD5Q9P267 1494 aa29.61■■■□□ 2.33
SMTN-204ENST00000404574 TRHP20396 242 aaPredicted RBP29.6■■■□□ 2.33
SMTN-204ENST00000404574 NEO1Q92859 1461 aa29.59■■■□□ 2.33
SMTN-204ENST00000404574 ABCC1P33527 1531 aa29.59■■■□□ 2.33
SMTN-204ENST00000404574 ADGRL1O94910 1474 aa29.59■■■□□ 2.33
SMTN-204ENST00000404574 PTPRKQ15262 1439 aa29.59■■■□□ 2.33
SMTN-204ENST00000404574 TSPY4P0CV99 314 aa29.59■■■□□ 2.33
SMTN-204ENST00000404574 TSPY10P0CW01 314 aa29.59■■■□□ 2.33
SMTN-204ENST00000404574 ARHGEF5Q12774 1597 aa29.58■■■□□ 2.33
SMTN-204ENST00000404574 CHIC2Q9UKJ5 165 aa29.57■■■□□ 2.32
SMTN-204ENST00000404574 TEX14Q8IWB6 1497 aa29.57■■■□□ 2.32
SMTN-204ENST00000404574 CCDC141Q6ZP82 1450 aa29.56■■■□□ 2.32
SMTN-204ENST00000404574 SCAPERQ9BY12 1400 aa29.56■■■□□ 2.32
SMTN-204ENST00000404574 ARHGEF12Q9NZN5 1544 aa29.55■■■□□ 2.32
SMTN-204ENST00000404574 TSPOAP1O95153 1857 aa29.54■■■□□ 2.32
SMTN-204ENST00000404574 SHANK2Q9UPX8 1470 aa29.5■■■□□ 2.31
SMTN-204ENST00000404574 TRAPPC8Q9Y2L5 1435 aa29.5■■■□□ 2.31
SMTN-204ENST00000404574 C9orf84Q5VXU9 1444 aa29.48■■■□□ 2.31
SMTN-204ENST00000404574 CROCC2H7BZ55 1655 aa29.48■■■□□ 2.31
SMTN-204ENST00000404574 AFAP1Q8N556 730 aa29.48■■■□□ 2.31
SMTN-204ENST00000404574 PPRC1Q5VV67 1664 aaKnown RBP29.48■■■□□ 2.31
SMTN-204ENST00000404574 ROCK1Q13464 1354 aa29.47■■■□□ 2.31
SMTN-204ENST00000404574 RRP7BPQ9NSQ0 103 aa29.45■■■□□ 2.31
SMTN-204ENST00000404574 ANKRD30AQ9BXX3 1397 aa29.45■■■□□ 2.31
SMTN-204ENST00000404574 DENND4BO75064 1496 aaPredicted RBP29.43■■■□□ 2.3
SMTN-204ENST00000404574 ZNF518AQ6AHZ1 1483 aa29.43■■■□□ 2.3
SMTN-204ENST00000404574 SPAG9O60271 1321 aaKnown RBP29.42■■■□□ 2.3
SMTN-204ENST00000404574 HFM1A2PYH4 1435 aa29.42■■■□□ 2.3
SMTN-204ENST00000404574 SETD5Q9C0A6 1442 aa29.42■■■□□ 2.3
SMTN-204ENST00000404574 POGZQ7Z3K3 1410 aa29.41■■■□□ 2.3
SMTN-204ENST00000404574 ADGRL2O95490 1459 aa29.41■■■□□ 2.3
SMTN-204ENST00000404574 NCOA1Q15788 1441 aa29.4■■■□□ 2.3
SMTN-204ENST00000404574 MYT1LQ9UL68 1186 aa29.39■■■□□ 2.3
SMTN-204ENST00000404574 MAST1Q9Y2H9 1570 aa29.38■■■□□ 2.29
SMTN-204ENST00000404574 ADGBQ8N7X0 1667 aa29.38■■■□□ 2.29
SMTN-204ENST00000404574 NAIPQ13075 1403 aa29.38■■■□□ 2.29
SMTN-204ENST00000404574 RAPGEF3O95398 923 aa29.37■■■□□ 2.29
SMTN-204ENST00000404574 RTEL1-TNFRSF6BF6WH68 1400 aa29.36■■■□□ 2.29
SMTN-204ENST00000404574 RAB3GAP2Q9H2M9 1393 aa29.33■■■□□ 2.29
SMTN-204ENST00000404574 KIF15Q9NS87 1388 aa29.31■■■□□ 2.28
SMTN-204ENST00000404574 KDM5CP41229 1560 aa29.31■■■□□ 2.28
SMTN-204ENST00000404574 HRCP23327 699 aa29.29■■■□□ 2.28
SMTN-204ENST00000404574 ATP7AQ04656 1500 aa29.29■■■□□ 2.28
SMTN-204ENST00000404574 ZFYVE16Q7Z3T8 1539 aa29.29■■■□□ 2.28
SMTN-204ENST00000404574 GCC2Q8IWJ2 1684 aa29.28■■■□□ 2.28
SMTN-204ENST00000404574 PLXNC1O60486 1568 aa29.27■■■□□ 2.28
SMTN-204ENST00000404574 MLH3Q9UHC1 1453 aa29.27■■■□□ 2.28
SMTN-204ENST00000404574 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
SMTN-204ENST00000404574 INO80Q9ULG1 1556 aaPredicted RBP29.27■■■□□ 2.28
SMTN-204ENST00000404574 ANKRD50Q9ULJ7 1429 aa29.24■■■□□ 2.27
SMTN-204ENST00000404574 HECW2Q9P2P5 1572 aa29.24■■■□□ 2.27
SMTN-204ENST00000404574 COL17A1Q9UMD9 1497 aaPredicted RBP29.22■■■□□ 2.27
SMTN-204ENST00000404574 FRMPD1Q5SYB0 1578 aa29.22■■■□□ 2.27
SMTN-204ENST00000404574 ACIN1Q9UKV3 1341 aaKnown RBP29.21■■■□□ 2.27
SMTN-204ENST00000404574 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.27
SMTN-204ENST00000404574 KIDINS220Q9ULH0 1771 aa29.2■■■□□ 2.26
SMTN-204ENST00000404574 ZMYM4Q5VZL5 1548 aa29.17■■■□□ 2.26
SMTN-204ENST00000404574 MAGI2Q86UL8 1455 aa29.17■■■□□ 2.26
SMTN-204ENST00000404574 KDM6BO15054 1643 aa29.15■■■□□ 2.26
SMTN-204ENST00000404574 ERBINQ96RT1 1412 aa29.14■■■□□ 2.26
SMTN-204ENST00000404574 TRIM52Q96A61 297 aa29.14■■■□□ 2.25
SMTN-204ENST00000404574 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
SMTN-204ENST00000404574 CCER1Q8TC90 406 aaPredicted RBP29.11■■■□□ 2.25
SMTN-204ENST00000404574 A2MP01023 1474 aa29.1■■■□□ 2.25
SMTN-204ENST00000404574 YEATS2Q9ULM3 1422 aa29.09■■■□□ 2.25
SMTN-204ENST00000404574 ABCA6Q8N139 1617 aa29.08■■■□□ 2.25
SMTN-204ENST00000404574 DIP2CQ9Y2E4 1556 aa29.06■■■□□ 2.24
SMTN-204ENST00000404574 DHX57Q6P158 1386 aaKnown RBP29.03■■■□□ 2.24
SMTN-204ENST00000404574 KIF3BO15066 747 aa29.03■■■□□ 2.24
SMTN-204ENST00000404574 ATP10AO60312 1499 aa29.03■■■□□ 2.24
SMTN-204ENST00000404574 NUP155O75694 1391 aa29■■■□□ 2.23
SMTN-204ENST00000404574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.99■■■□□ 2.232e-7■■□□□ 11.7
SMTN-204ENST00000404574 EIF2AK4Q9P2K8 1649 aaKnown RBP28.99■■■□□ 2.23
SMTN-204ENST00000404574 ARHGEF40Q8TER5 1519 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms