RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
RBM39-206ENST00000403542 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
RBM39-206ENST00000403542 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
RBM39-206ENST00000403542 FBLN2P98095 1184 aa16.44■□□□□ 0.22
RBM39-206ENST00000403542 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
RBM39-206ENST00000403542 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
RBM39-206ENST00000403542 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
RBM39-206ENST00000403542 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
RBM39-206ENST00000403542 ARHGEF11O15085 1522 aa16.38■□□□□ 0.21
RBM39-206ENST00000403542 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
RBM39-206ENST00000403542 CFDP1Q9UEE9 299 aaPredicted RBP16.38■□□□□ 0.21
RBM39-206ENST00000403542 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
RBM39-206ENST00000403542 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
RBM39-206ENST00000403542 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
RBM39-206ENST00000403542 TCOF1Q13428 1488 aaKnown RBP16.36■□□□□ 0.21
RBM39-206ENST00000403542 DAPK1P53355 1430 aa16.36■□□□□ 0.21
RBM39-206ENST00000403542 ABCC5O15440 1437 aa16.36■□□□□ 0.21
RBM39-206ENST00000403542 PKD2Q13563 968 aa16.35■□□□□ 0.21
RBM39-206ENST00000403542 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
RBM39-206ENST00000403542 IQGAP2Q13576 1575 aa16.35■□□□□ 0.21
RBM39-206ENST00000403542 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
RBM39-206ENST00000403542 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
RBM39-206ENST00000403542 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.2
RBM39-206ENST00000403542 PRG4Q92954 1404 aaPredicted RBP16.33■□□□□ 0.2
RBM39-206ENST00000403542 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
RBM39-206ENST00000403542 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
RBM39-206ENST00000403542 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
RBM39-206ENST00000403542 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
RBM39-206ENST00000403542 WDR62O43379 1518 aa16.29■□□□□ 0.2
RBM39-206ENST00000403542 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
RBM39-206ENST00000403542 USP47Q96K76 1375 aa16.28■□□□□ 0.2
RBM39-206ENST00000403542 FANCIQ9NVI1 1328 aa16.28■□□□□ 0.2
RBM39-206ENST00000403542 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
RBM39-206ENST00000403542 NBR1Q14596 966 aa16.26■□□□□ 0.19
RBM39-206ENST00000403542 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
RBM39-206ENST00000403542 SPATA31E1Q6ZUB1 1445 aa16.26■□□□□ 0.19
RBM39-206ENST00000403542 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
RBM39-206ENST00000403542 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
RBM39-206ENST00000403542 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
RBM39-206ENST00000403542 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
RBM39-206ENST00000403542 PLB1Q6P1J6 1458 aa16.23■□□□□ 0.19
RBM39-206ENST00000403542 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
RBM39-206ENST00000403542 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
RBM39-206ENST00000403542 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
RBM39-206ENST00000403542 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
RBM39-206ENST00000403542 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
RBM39-206ENST00000403542 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
RBM39-206ENST00000403542 PZPP20742 1482 aa16.21■□□□□ 0.19
RBM39-206ENST00000403542 NUP155O75694 1391 aa16.21■□□□□ 0.19
RBM39-206ENST00000403542 DISP1Q96F81 1524 aa16.21■□□□□ 0.19
RBM39-206ENST00000403542 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
RBM39-206ENST00000403542 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
RBM39-206ENST00000403542 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
RBM39-206ENST00000403542 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
RBM39-206ENST00000403542 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
RBM39-206ENST00000403542 DNMT1P26358 1616 aaKnown RBP16.17■□□□□ 0.18
RBM39-206ENST00000403542 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
RBM39-206ENST00000403542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.184e-13■■□□□ 11.5
RBM39-206ENST00000403542 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
RBM39-206ENST00000403542 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
RBM39-206ENST00000403542 KIAA0586Q9BVV6 1533 aa16.15■□□□□ 0.18
RBM39-206ENST00000403542 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
RBM39-206ENST00000403542 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
RBM39-206ENST00000403542 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
RBM39-206ENST00000403542 PLEKHD1A6NEE1 506 aa16.14■□□□□ 0.17
RBM39-206ENST00000403542 KIAA0556O60303 1618 aa16.14■□□□□ 0.17
RBM39-206ENST00000403542 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.17
RBM39-206ENST00000403542 TSPY4P0CV99 314 aa16.14■□□□□ 0.17
RBM39-206ENST00000403542 TSPY10P0CW01 314 aa16.14■□□□□ 0.17
RBM39-206ENST00000403542 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
RBM39-206ENST00000403542 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
RBM39-206ENST00000403542 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
RBM39-206ENST00000403542 KIF14Q15058 1648 aa16.12■□□□□ 0.17
RBM39-206ENST00000403542 SMG6Q86US8 1419 aaKnown RBP16.12■□□□□ 0.17
RBM39-206ENST00000403542 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
RBM39-206ENST00000403542 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
RBM39-206ENST00000403542 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
RBM39-206ENST00000403542 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
RBM39-206ENST00000403542 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
RBM39-206ENST00000403542 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
RBM39-206ENST00000403542 SKAP1Q86WV1 359 aa16.1■□□□□ 0.17
RBM39-206ENST00000403542 DEKP35659 375 aaKnown RBP16.08■□□□□ 0.16
RBM39-206ENST00000403542 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
RBM39-206ENST00000403542 PLIN1O60240 522 aa16.08■□□□□ 0.16
RBM39-206ENST00000403542 ROCK2O75116 1388 aaKnown RBP16.07■□□□□ 0.16
RBM39-206ENST00000403542 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
RBM39-206ENST00000403542 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
RBM39-206ENST00000403542 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
RBM39-206ENST00000403542 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
RBM39-206ENST00000403542 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
RBM39-206ENST00000403542 MYBBP1AQ9BQG0 1328 aaKnown RBP16.03■□□□□ 0.16
RBM39-206ENST00000403542 RCAN3Q9UKA8 241 aa16.02■□□□□ 0.16
RBM39-206ENST00000403542 RRP1P56182 461 aaKnown RBP16.02■□□□□ 0.15
RBM39-206ENST00000403542 KDM5CP41229 1560 aa16.02■□□□□ 0.15
RBM39-206ENST00000403542 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
RBM39-206ENST00000403542 RNF123Q5XPI4 1314 aa16■□□□□ 0.15
RBM39-206ENST00000403542 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
RBM39-206ENST00000403542 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
RBM39-206ENST00000403542 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
RBM39-206ENST00000403542 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms