RNA–Protein interactions for RNA: ENST00000402311.5

RABGAP1-203, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-203ENST00000402311 TOM1O60784 492 aa23.56■■□□□ 1.36
RABGAP1-203ENST00000402311 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
RABGAP1-203ENST00000402311 RGS17Q9UGC6 210 aaPredicted RBP23.49■■□□□ 1.35
RABGAP1-203ENST00000402311 MAGI2Q86UL8 1455 aa23.49■■□□□ 1.35
RABGAP1-203ENST00000402311 CAMSAP1Q5T5Y3 1602 aa23.45■■□□□ 1.34
RABGAP1-203ENST00000402311 SENP3Q9H4L4 574 aaPredicted RBP23.45■■□□□ 1.34
RABGAP1-203ENST00000402311 SRCAPQ6ZRS2 3230 aa23.44■■□□□ 1.34
RABGAP1-203ENST00000402311 NCKAP5LQ9HCH0 1330 aa23.44■■□□□ 1.34
RABGAP1-203ENST00000402311 ATP10BO94823 1461 aa23.42■■□□□ 1.34
RABGAP1-203ENST00000402311 CFAP74Q9C0B2 1584 aa23.4■■□□□ 1.34
RABGAP1-203ENST00000402311 HECW1Q76N89 1606 aa23.4■■□□□ 1.34
RABGAP1-203ENST00000402311 C9orf84Q5VXU9 1444 aa23.39■■□□□ 1.33
RABGAP1-203ENST00000402311 TRAPPC8Q9Y2L5 1435 aa23.39■■□□□ 1.33
RABGAP1-203ENST00000402311 C3P01024 1663 aa23.38■■□□□ 1.33
RABGAP1-203ENST00000402311 ATP10AO60312 1499 aa23.38■■□□□ 1.33
RABGAP1-203ENST00000402311 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
RABGAP1-203ENST00000402311 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
RABGAP1-203ENST00000402311 ESF1Q9H501 851 aaKnown RBP23.34■■□□□ 1.33
RABGAP1-203ENST00000402311 SETD1AO15047 1707 aaKnown RBP23.33■■□□□ 1.33
RABGAP1-203ENST00000402311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
RABGAP1-203ENST00000402311 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
RABGAP1-203ENST00000402311 POTEAQ6S8J7 498 aa23.33■■□□□ 1.33
RABGAP1-203ENST00000402311 PKD2Q13563 968 aa23.3■■□□□ 1.32
RABGAP1-203ENST00000402311 PTPRKQ15262 1439 aa23.29■■□□□ 1.32
RABGAP1-203ENST00000402311 PPP6R1Q9UPN7 881 aa23.29■■□□□ 1.32
RABGAP1-203ENST00000402311 CPS1P31327 1500 aa23.24■■□□□ 1.31
RABGAP1-203ENST00000402311 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
RABGAP1-203ENST00000402311 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.3
RABGAP1-203ENST00000402311 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
RABGAP1-203ENST00000402311 SCAPERQ9BY12 1400 aa23.18■■□□□ 1.3
RABGAP1-203ENST00000402311 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
RABGAP1-203ENST00000402311 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
RABGAP1-203ENST00000402311 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
RABGAP1-203ENST00000402311 ALKQ9UM73 1620 aa23.14■■□□□ 1.29
RABGAP1-203ENST00000402311 MYT1LQ9UL68 1186 aa23.12■■□□□ 1.29
RABGAP1-203ENST00000402311 SHANK2Q9UPX8 1470 aa23.11■■□□□ 1.29
RABGAP1-203ENST00000402311 NPATQ14207 1427 aa23.1■■□□□ 1.29
RABGAP1-203ENST00000402311 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.28
RABGAP1-203ENST00000402311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.07■■□□□ 1.28
RABGAP1-203ENST00000402311 P3H3Q8IVL6 736 aa23.06■■□□□ 1.28
RABGAP1-203ENST00000402311 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
RABGAP1-203ENST00000402311 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
RABGAP1-203ENST00000402311 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
RABGAP1-203ENST00000402311 AGLP35573 1532 aa23.03■■□□□ 1.28
RABGAP1-203ENST00000402311 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
RABGAP1-203ENST00000402311 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
RABGAP1-203ENST00000402311 REREQ9P2R6 1566 aa22.98■■□□□ 1.27
RABGAP1-203ENST00000402311 DIP2CQ9Y2E4 1556 aa22.98■■□□□ 1.27
RABGAP1-203ENST00000402311 ZNF518AQ6AHZ1 1483 aa22.96■■□□□ 1.27
RABGAP1-203ENST00000402311 MROH2AA6NES4 1674 aa22.93■■□□□ 1.26
RABGAP1-203ENST00000402311 TRIM52Q96A61 297 aa22.93■■□□□ 1.26
RABGAP1-203ENST00000402311 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
RABGAP1-203ENST00000402311 RNF17Q9BXT8 1623 aaKnown RBP22.92■■□□□ 1.26
RABGAP1-203ENST00000402311 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
RABGAP1-203ENST00000402311 NUP153P49790 1475 aaKnown RBP22.91■■□□□ 1.26
RABGAP1-203ENST00000402311 POLR1AO95602 1720 aaPredicted RBP22.9■■□□□ 1.26
RABGAP1-203ENST00000402311 PLCH2O75038 1416 aa22.9■■□□□ 1.26
RABGAP1-203ENST00000402311 AFAP1Q8N556 730 aa22.89■■□□□ 1.25
RABGAP1-203ENST00000402311 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
RABGAP1-203ENST00000402311 EFCAB2Q5VUJ9 269 aa22.88■■□□□ 1.25
RABGAP1-203ENST00000402311 ABCA6Q8N139 1617 aa22.88■■□□□ 1.25
RABGAP1-203ENST00000402311 KDM5CP41229 1560 aa22.87■■□□□ 1.25
RABGAP1-203ENST00000402311 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
RABGAP1-203ENST00000402311 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
RABGAP1-203ENST00000402311 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
RABGAP1-203ENST00000402311 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
RABGAP1-203ENST00000402311 CLTCQ00610 1675 aaKnown RBP22.75■■□□□ 1.23
RABGAP1-203ENST00000402311 MLH3Q9UHC1 1453 aa22.75■■□□□ 1.23
RABGAP1-203ENST00000402311 MYO5CQ9NQX4 1742 aa22.75■■□□□ 1.23
RABGAP1-203ENST00000402311 FOXD1Q16676 465 aa22.75■■□□□ 1.23
RABGAP1-203ENST00000402311 SYNMO15061 1565 aa22.75■■□□□ 1.23
RABGAP1-203ENST00000402311 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
RABGAP1-203ENST00000402311 ZRANB1Q9UGI0 708 aa22.73■■□□□ 1.23
RABGAP1-203ENST00000402311 ZNF772Q68DY9 489 aaPredicted RBP22.71■■□□□ 1.23
RABGAP1-203ENST00000402311 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
RABGAP1-203ENST00000402311 STRCP1A6NGW2 1772 aa22.68■■□□□ 1.22
RABGAP1-203ENST00000402311 SAMD9Q5K651 1589 aa22.68■■□□□ 1.22
RABGAP1-203ENST00000402311 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
RABGAP1-203ENST00000402311 RBM33Q96EV2 1170 aaKnown RBP22.67■■□□□ 1.22
RABGAP1-203ENST00000402311 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
RABGAP1-203ENST00000402311 RXRBP28702 533 aa22.66■■□□□ 1.22
RABGAP1-203ENST00000402311 IFFO2Q5TF58 517 aa22.66■■□□□ 1.22
RABGAP1-203ENST00000402311 MEX3CQ5U5Q3 659 aaKnown RBP22.64■■□□□ 1.21
RABGAP1-203ENST00000402311 SETBP1Q9Y6X0 1596 aa22.63■■□□□ 1.21
RABGAP1-203ENST00000402311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
RABGAP1-203ENST00000402311 IQGAP1P46940 1657 aa22.6■■□□□ 1.21
RABGAP1-203ENST00000402311 CDK13Q14004 1512 aaKnown RBP22.6■■□□□ 1.21
RABGAP1-203ENST00000402311 MED14O60244 1454 aa22.6■■□□□ 1.21
RABGAP1-203ENST00000402311 CDK12Q9NYV4 1490 aaPredicted RBP22.58■■□□□ 1.2
RABGAP1-203ENST00000402311 JCADQ9P266 1359 aa22.57■■□□□ 1.2
RABGAP1-203ENST00000402311 KIDINS220Q9ULH0 1771 aa22.57■■□□□ 1.2
RABGAP1-203ENST00000402311 DEPDC5O75140 1603 aa22.57■■□□□ 1.2
RABGAP1-203ENST00000402311 ABCC1P33527 1531 aa22.57■■□□□ 1.2
RABGAP1-203ENST00000402311 ITSN2Q9NZM3 1697 aa22.56■■□□□ 1.2
RABGAP1-203ENST00000402311 ROBO1Q9Y6N7 1651 aa22.56■■□□□ 1.2
RABGAP1-203ENST00000402311 THEMISQ8N1K5 641 aaPredicted RBP22.56■■□□□ 1.2
RABGAP1-203ENST00000402311 GGT6Q6P531 493 aa22.52■■□□□ 1.2
RABGAP1-203ENST00000402311 TNRQ92752 1358 aa22.5■■□□□ 1.19
RABGAP1-203ENST00000402311 NUTM2BA6NNL0 878 aaPredicted RBP22.5■■□□□ 1.19
RABGAP1-203ENST00000402311 NUTM2EB1AL46 878 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms