RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 CHMP7Q8WUX9 453 aaPredicted RBP23.55■■□□□ 1.36
SNRNP70-202ENST00000401730 KDM5BQ9UGL1 1544 aa23.52■■□□□ 1.36
SNRNP70-202ENST00000401730 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
SNRNP70-202ENST00000401730 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
SNRNP70-202ENST00000401730 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
SNRNP70-202ENST00000401730 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
SNRNP70-202ENST00000401730 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
SNRNP70-202ENST00000401730 PRKRIP1Q9H875 184 aaPredicted RBP23.48■■□□□ 1.35
SNRNP70-202ENST00000401730 HECW1Q76N89 1606 aa23.46■■□□□ 1.35
SNRNP70-202ENST00000401730 PKD2Q13563 968 aa23.45■■□□□ 1.34
SNRNP70-202ENST00000401730 ABCC5O15440 1437 aa23.44■■□□□ 1.34
SNRNP70-202ENST00000401730 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
SNRNP70-202ENST00000401730 CCDC7Q96M83 1385 aa23.43■■□□□ 1.34
SNRNP70-202ENST00000401730 DAPK1P53355 1430 aa23.43■■□□□ 1.34
SNRNP70-202ENST00000401730 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
SNRNP70-202ENST00000401730 B4GALNT3Q6L9W6 998 aa23.42■■□□□ 1.34
SNRNP70-202ENST00000401730 ANKRD30BQ9BXX2 1392 aa23.41■■□□□ 1.34
SNRNP70-202ENST00000401730 TCOF1Q13428 1488 aaKnown RBP23.4■■□□□ 1.34
SNRNP70-202ENST00000401730 MIA2Q96PC5 1412 aa23.38■■□□□ 1.33
SNRNP70-202ENST00000401730 WDR62O43379 1518 aa23.38■■□□□ 1.33
SNRNP70-202ENST00000401730 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
SNRNP70-202ENST00000401730 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
SNRNP70-202ENST00000401730 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
SNRNP70-202ENST00000401730 PLB1Q6P1J6 1458 aa23.37■■□□□ 1.33
SNRNP70-202ENST00000401730 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
SNRNP70-202ENST00000401730 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
SNRNP70-202ENST00000401730 SALL2Q9Y467 1007 aaPredicted RBP23.35■■□□□ 1.33
SNRNP70-202ENST00000401730 JPH4Q96JJ6 628 aa23.33■■□□□ 1.33
SNRNP70-202ENST00000401730 DISP1Q96F81 1524 aa23.33■■□□□ 1.32
SNRNP70-202ENST00000401730 HNRNPMP52272 730 aaKnown RBP eCLIP23.32■■□□□ 1.323e-8■■□□□ 13.9
SNRNP70-202ENST00000401730 ERICH6Q7L0X2 663 aa23.31■■□□□ 1.32
SNRNP70-202ENST00000401730 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
SNRNP70-202ENST00000401730 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
SNRNP70-202ENST00000401730 RGL3Q3MIN7 710 aa23.28■■□□□ 1.32
SNRNP70-202ENST00000401730 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
SNRNP70-202ENST00000401730 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
SNRNP70-202ENST00000401730 RPRD2Q5VT52 1461 aaKnown RBP23.28■■□□□ 1.32
SNRNP70-202ENST00000401730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.27■■□□□ 1.321e-10■■□□□ 11.8
SNRNP70-202ENST00000401730 GCC2Q8IWJ2 1684 aa23.27■■□□□ 1.32
SNRNP70-202ENST00000401730 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
SNRNP70-202ENST00000401730 NUP155O75694 1391 aa23.26■■□□□ 1.31
SNRNP70-202ENST00000401730 DCAF11Q8TEB1 546 aa23.26■■□□□ 1.31
SNRNP70-202ENST00000401730 MSH5O43196 834 aa23.25■■□□□ 1.31
SNRNP70-202ENST00000401730 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
SNRNP70-202ENST00000401730 USP47Q96K76 1375 aa23.23■■□□□ 1.31
SNRNP70-202ENST00000401730 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
SNRNP70-202ENST00000401730 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
SNRNP70-202ENST00000401730 AKNAQ7Z591 1439 aa23.22■■□□□ 1.31
SNRNP70-202ENST00000401730 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
SNRNP70-202ENST00000401730 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
SNRNP70-202ENST00000401730 ROCK1Q13464 1354 aa23.21■■□□□ 1.31
SNRNP70-202ENST00000401730 CAMSAP2Q08AD1 1489 aa23.21■■□□□ 1.31
SNRNP70-202ENST00000401730 TEX14Q8IWB6 1497 aa23.21■■□□□ 1.31
SNRNP70-202ENST00000401730 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
SNRNP70-202ENST00000401730 ST20-MTHFSA0A0A6YYL1 179 aa23.2■■□□□ 1.3
SNRNP70-202ENST00000401730 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
SNRNP70-202ENST00000401730 TMC1Q8TDI8 760 aa23.19■■□□□ 1.3
SNRNP70-202ENST00000401730 PZPP20742 1482 aa23.18■■□□□ 1.3
SNRNP70-202ENST00000401730 GPATCH8Q9UKJ3 1502 aaKnown RBP23.18■■□□□ 1.3
SNRNP70-202ENST00000401730 RAPGEF6Q8TEU7 1601 aa23.16■■□□□ 1.3
SNRNP70-202ENST00000401730 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
SNRNP70-202ENST00000401730 ZBED9Q6R2W3 1325 aa23.15■■□□□ 1.3
SNRNP70-202ENST00000401730 KIF14Q15058 1648 aa23.15■■□□□ 1.3
SNRNP70-202ENST00000401730 ANKRD50Q9ULJ7 1429 aa23.15■■□□□ 1.3
SNRNP70-202ENST00000401730 DNMT1P26358 1616 aaKnown RBP23.14■■□□□ 1.29
SNRNP70-202ENST00000401730 SPATA31E1Q6ZUB1 1445 aa23.14■■□□□ 1.29
SNRNP70-202ENST00000401730 KIAA1107Q9UPP5 1409 aa23.12■■□□□ 1.29
SNRNP70-202ENST00000401730 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
SNRNP70-202ENST00000401730 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.28
SNRNP70-202ENST00000401730 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
SNRNP70-202ENST00000401730 DHX29Q7Z478 1369 aaKnown RBP23.06■■□□□ 1.28
SNRNP70-202ENST00000401730 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
SNRNP70-202ENST00000401730 CCDC136Q96JN2 1154 aa23.03■■□□□ 1.28
SNRNP70-202ENST00000401730 C9orf84Q5VXU9 1444 aa23.02■■□□□ 1.28
SNRNP70-202ENST00000401730 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
SNRNP70-202ENST00000401730 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.27
SNRNP70-202ENST00000401730 PNISRQ8TF01 805 aaKnown RBP23■■□□□ 1.27
SNRNP70-202ENST00000401730 NUDCQ9Y266 331 aa22.99■■□□□ 1.27
SNRNP70-202ENST00000401730 ROCK2O75116 1388 aaKnown RBP22.99■■□□□ 1.27
SNRNP70-202ENST00000401730 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
SNRNP70-202ENST00000401730 ATP10BO94823 1461 aa22.98■■□□□ 1.27
SNRNP70-202ENST00000401730 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
SNRNP70-202ENST00000401730 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
SNRNP70-202ENST00000401730 PTPRGP23470 1445 aa22.93■■□□□ 1.26
SNRNP70-202ENST00000401730 NBR1Q14596 966 aa22.92■■□□□ 1.26
SNRNP70-202ENST00000401730 CDCA7LQ96GN5 454 aa22.88■■□□□ 1.25
SNRNP70-202ENST00000401730 ERICH6BQ5W0A0 696 aa22.87■■□□□ 1.25
SNRNP70-202ENST00000401730 MYT1LQ9UL68 1186 aa22.87■■□□□ 1.25
SNRNP70-202ENST00000401730 MBD5Q9P267 1494 aa22.87■■□□□ 1.25
SNRNP70-202ENST00000401730 FANCIQ9NVI1 1328 aa22.87■■□□□ 1.25
SNRNP70-202ENST00000401730 NPM2Q86SE8 214 aaKnown RBP22.86■■□□□ 1.25
SNRNP70-202ENST00000401730 PLIN1O60240 522 aa22.86■■□□□ 1.25
SNRNP70-202ENST00000401730 EXOC6Q8TAG9 804 aa22.84■■□□□ 1.25
SNRNP70-202ENST00000401730 ADGRL2O95490 1459 aa22.84■■□□□ 1.25
SNRNP70-202ENST00000401730 SMG6Q86US8 1419 aaKnown RBP22.83■■□□□ 1.25
SNRNP70-202ENST00000401730 ITSN2Q9NZM3 1697 aa22.83■■□□□ 1.25
SNRNP70-202ENST00000401730 SKAP1Q86WV1 359 aa22.83■■□□□ 1.25
SNRNP70-202ENST00000401730 MYBBP1AQ9BQG0 1328 aaKnown RBP22.83■■□□□ 1.25
SNRNP70-202ENST00000401730 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
SNRNP70-202ENST00000401730 DEKP35659 375 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms