RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 ITGAEP38570 1179 aa29.41■■■□□ 2.3
AC008060.1-201ENST00000401499 ZNF644Q9H582 1327 aaPredicted RBP29.41■■■□□ 2.3
AC008060.1-201ENST00000401499 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
AC008060.1-201ENST00000401499 PTPRKQ15262 1439 aa29.36■■■□□ 2.29
AC008060.1-201ENST00000401499 ARHGAP5Q13017 1502 aa29.36■■■□□ 2.29
AC008060.1-201ENST00000401499 DNMT1P26358 1616 aaKnown RBP29.36■■■□□ 2.29
AC008060.1-201ENST00000401499 PLCH2O75038 1416 aa29.36■■■□□ 2.29
AC008060.1-201ENST00000401499 ZNF777Q9ULD5 760 aaPredicted RBP29.33■■■□□ 2.29
AC008060.1-201ENST00000401499 ARAP3Q8WWN8 1544 aa29.33■■■□□ 2.29
AC008060.1-201ENST00000401499 DAPK1P53355 1430 aa29.28■■■□□ 2.28
AC008060.1-201ENST00000401499 ABCC5O15440 1437 aa29.28■■■□□ 2.28
AC008060.1-201ENST00000401499 CROCC2H7BZ55 1655 aa29.28■■■□□ 2.28
AC008060.1-201ENST00000401499 DIP2BQ9P265 1576 aa29.24■■■□□ 2.27
AC008060.1-201ENST00000401499 GLI2P10070 1586 aa29.23■■■□□ 2.27
AC008060.1-201ENST00000401499 ARHGEF5Q12774 1597 aa29.23■■■□□ 2.27
AC008060.1-201ENST00000401499 DNAJC5Q9H3Z4 198 aa29.23■■■□□ 2.27
AC008060.1-201ENST00000401499 SYCP2Q9BX26 1530 aa29.22■■■□□ 2.27
AC008060.1-201ENST00000401499 MBD5Q9P267 1494 aa29.22■■■□□ 2.27
AC008060.1-201ENST00000401499 MAP3K4Q9Y6R4 1608 aa29.21■■■□□ 2.27
AC008060.1-201ENST00000401499 ABCC1P33527 1531 aa29.2■■■□□ 2.27
AC008060.1-201ENST00000401499 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
AC008060.1-201ENST00000401499 CD109Q6YHK3 1445 aa29.18■■■□□ 2.26
AC008060.1-201ENST00000401499 FANCAO15360 1455 aa29.18■■■□□ 2.26
AC008060.1-201ENST00000401499 PLEKHH2Q8IVE3 1493 aa29.18■■■□□ 2.26
AC008060.1-201ENST00000401499 ARHGEF12Q9NZN5 1544 aa29.17■■■□□ 2.26
AC008060.1-201ENST00000401499 KIAA1107Q9UPP5 1409 aa29.17■■■□□ 2.26
AC008060.1-201ENST00000401499 ADGBQ8N7X0 1667 aa29.16■■■□□ 2.26
AC008060.1-201ENST00000401499 HNRNPMP52272 730 aaKnown RBP eCLIP29.15■■■□□ 2.26
AC008060.1-201ENST00000401499 AKNAQ7Z591 1439 aa29.15■■■□□ 2.26
AC008060.1-201ENST00000401499 CHIC2Q9UKJ5 165 aa29.14■■■□□ 2.26
AC008060.1-201ENST00000401499 GCC2Q8IWJ2 1684 aa29.14■■■□□ 2.26
AC008060.1-201ENST00000401499 HFM1A2PYH4 1435 aa29.14■■■□□ 2.26
AC008060.1-201ENST00000401499 SETD5Q9C0A6 1442 aa29.14■■■□□ 2.26
AC008060.1-201ENST00000401499 CCDC141Q6ZP82 1450 aa29.14■■■□□ 2.26
AC008060.1-201ENST00000401499 SHANK2Q9UPX8 1470 aa29.13■■■□□ 2.25
AC008060.1-201ENST00000401499 KIF13AQ9H1H9 1805 aa29.12■■■□□ 2.25
AC008060.1-201ENST00000401499 CFAP74Q9C0B2 1584 aa29.12■■■□□ 2.25
AC008060.1-201ENST00000401499 NAIPQ13075 1403 aa29.1■■■□□ 2.25
AC008060.1-201ENST00000401499 RAB3GAP2Q9H2M9 1393 aa29.1■■■□□ 2.25
AC008060.1-201ENST00000401499 ADGRL2O95490 1459 aa29.1■■■□□ 2.25
AC008060.1-201ENST00000401499 ROCK1Q13464 1354 aa29.1■■■□□ 2.25
AC008060.1-201ENST00000401499 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
AC008060.1-201ENST00000401499 FAM69CQ0P6D2 419 aa29.07■■■□□ 2.24
AC008060.1-201ENST00000401499 MAST1Q9Y2H9 1570 aa29.06■■■□□ 2.24
AC008060.1-201ENST00000401499 ADGRL1O94910 1474 aa29.05■■■□□ 2.24
AC008060.1-201ENST00000401499 RSPH4AQ5TD94 716 aa29.05■■■□□ 2.24
AC008060.1-201ENST00000401499 RRP7BPQ9NSQ0 103 aa29.05■■■□□ 2.24
AC008060.1-201ENST00000401499 TRAPPC8Q9Y2L5 1435 aa29.04■■■□□ 2.24
AC008060.1-201ENST00000401499 PPRC1Q5VV67 1664 aaKnown RBP29.04■■■□□ 2.24
AC008060.1-201ENST00000401499 NCOA1Q15788 1441 aa29.02■■■□□ 2.24
AC008060.1-201ENST00000401499 KDM6BO15054 1643 aa29.01■■■□□ 2.24
AC008060.1-201ENST00000401499 NEO1Q92859 1461 aa29.01■■■□□ 2.23
AC008060.1-201ENST00000401499 TSPOAP1O95153 1857 aa29■■■□□ 2.23
AC008060.1-201ENST00000401499 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
AC008060.1-201ENST00000401499 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
AC008060.1-201ENST00000401499 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
AC008060.1-201ENST00000401499 ANKRD30AQ9BXX3 1397 aa28.98■■■□□ 2.23
AC008060.1-201ENST00000401499 HRCP23327 699 aa28.95■■■□□ 2.22
AC008060.1-201ENST00000401499 PLXNC1O60486 1568 aa28.95■■■□□ 2.22
AC008060.1-201ENST00000401499 ZFYVE16Q7Z3T8 1539 aa28.91■■■□□ 2.22
AC008060.1-201ENST00000401499 INO80Q9ULG1 1556 aaPredicted RBP28.91■■■□□ 2.22
AC008060.1-201ENST00000401499 AFAP1Q8N556 730 aa28.91■■■□□ 2.22
AC008060.1-201ENST00000401499 CCER1Q8TC90 406 aaPredicted RBP28.91■■■□□ 2.22
AC008060.1-201ENST00000401499 DHX57Q6P158 1386 aaKnown RBP28.91■■■□□ 2.22
AC008060.1-201ENST00000401499 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.22
AC008060.1-201ENST00000401499 ZNF518AQ6AHZ1 1483 aa28.88■■■□□ 2.21
AC008060.1-201ENST00000401499 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
AC008060.1-201ENST00000401499 KDM5CP41229 1560 aa28.87■■■□□ 2.21
AC008060.1-201ENST00000401499 TEX14Q8IWB6 1497 aa28.87■■■□□ 2.21
AC008060.1-201ENST00000401499 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
AC008060.1-201ENST00000401499 ATP7AQ04656 1500 aa28.85■■■□□ 2.21
AC008060.1-201ENST00000401499 RICTORQ6R327 1708 aa28.85■■■□□ 2.21
AC008060.1-201ENST00000401499 SPAG9O60271 1321 aaKnown RBP28.85■■■□□ 2.21
AC008060.1-201ENST00000401499 DENND4BO75064 1496 aaPredicted RBP28.83■■■□□ 2.21
AC008060.1-201ENST00000401499 ANKRD50Q9ULJ7 1429 aa28.83■■■□□ 2.21
AC008060.1-201ENST00000401499 KIDINS220Q9ULH0 1771 aa28.82■■■□□ 2.2
AC008060.1-201ENST00000401499 FRMPD1Q5SYB0 1578 aa28.8■■■□□ 2.2
AC008060.1-201ENST00000401499 DUOX2Q9NRD8 1548 aa28.78■■■□□ 2.2
AC008060.1-201ENST00000401499 HECW2Q9P2P5 1572 aa28.78■■■□□ 2.2
AC008060.1-201ENST00000401499 MLH3Q9UHC1 1453 aa28.75■■■□□ 2.19
AC008060.1-201ENST00000401499 RAPGEF3O95398 923 aa28.74■■■□□ 2.19
AC008060.1-201ENST00000401499 ERBINQ96RT1 1412 aa28.7■■■□□ 2.19
AC008060.1-201ENST00000401499 ABCA6Q8N139 1617 aa28.7■■■□□ 2.18
AC008060.1-201ENST00000401499 ZMYM4Q5VZL5 1548 aa28.69■■■□□ 2.18
AC008060.1-201ENST00000401499 TRIM52Q96A61 297 aa28.67■■■□□ 2.18
AC008060.1-201ENST00000401499 UNC13BO14795 1591 aa28.67■■■□□ 2.18
AC008060.1-201ENST00000401499 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
AC008060.1-201ENST00000401499 COL17A1Q9UMD9 1497 aaPredicted RBP28.66■■■□□ 2.18
AC008060.1-201ENST00000401499 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
AC008060.1-201ENST00000401499 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
AC008060.1-201ENST00000401499 KDM5DQ9BY66 1539 aa28.65■■■□□ 2.18
AC008060.1-201ENST00000401499 PZPP20742 1482 aa28.64■■■□□ 2.18
AC008060.1-201ENST00000401499 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.18
AC008060.1-201ENST00000401499 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
AC008060.1-201ENST00000401499 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
AC008060.1-201ENST00000401499 ZEB1P37275 1124 aaPredicted RBP28.6■■■□□ 2.17
AC008060.1-201ENST00000401499 DHX29Q7Z478 1369 aaKnown RBP28.6■■■□□ 2.17
AC008060.1-201ENST00000401499 MAGI2Q86UL8 1455 aa28.6■■■□□ 2.17
AC008060.1-201ENST00000401499 A2MP01023 1474 aa28.59■■■□□ 2.17
AC008060.1-201ENST00000401499 YEATS2Q9ULM3 1422 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms