RNA–Protein interactions for RNA: ENST00000399599.7

CDIP1-201, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 3,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-201ENST00000399599 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
CDIP1-201ENST00000399599 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
CDIP1-201ENST00000399599 UACAQ9BZF9 1416 aa19.83■□□□□ 0.76
CDIP1-201ENST00000399599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.82■□□□□ 0.76
CDIP1-201ENST00000399599 PTPRGP23470 1445 aa19.82■□□□□ 0.76
CDIP1-201ENST00000399599 POLR3GLQ9BT43 218 aa19.81■□□□□ 0.76
CDIP1-201ENST00000399599 KIF14Q15058 1648 aa19.81■□□□□ 0.76
CDIP1-201ENST00000399599 ABCC5O15440 1437 aa19.81■□□□□ 0.76
CDIP1-201ENST00000399599 NUP160Q12769 1436 aa19.81■□□□□ 0.76
CDIP1-201ENST00000399599 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
CDIP1-201ENST00000399599 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
CDIP1-201ENST00000399599 DAPK1P53355 1430 aa19.79■□□□□ 0.76
CDIP1-201ENST00000399599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.76
CDIP1-201ENST00000399599 ERCC6L2Q5T890 1561 aa19.77■□□□□ 0.76
CDIP1-201ENST00000399599 TROQ12816 1431 aaPredicted RBP19.77■□□□□ 0.76
CDIP1-201ENST00000399599 ATP10BO94823 1461 aa19.76■□□□□ 0.75
CDIP1-201ENST00000399599 DENND4BO75064 1496 aaPredicted RBP19.75■□□□□ 0.75
CDIP1-201ENST00000399599 GPATCH8Q9UKJ3 1502 aaKnown RBP19.73■□□□□ 0.75
CDIP1-201ENST00000399599 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
CDIP1-201ENST00000399599 PKD2Q13563 968 aa19.72■□□□□ 0.75
CDIP1-201ENST00000399599 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
CDIP1-201ENST00000399599 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
CDIP1-201ENST00000399599 CAMSAP2Q08AD1 1489 aa19.71■□□□□ 0.75
CDIP1-201ENST00000399599 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
CDIP1-201ENST00000399599 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
CDIP1-201ENST00000399599 NBPF8Q3BBV2 869 aa19.7■□□□□ 0.74
CDIP1-201ENST00000399599 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
CDIP1-201ENST00000399599 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
CDIP1-201ENST00000399599 CHD1O14646 1710 aa19.67■□□□□ 0.74
CDIP1-201ENST00000399599 MYT1LQ9UL68 1186 aa19.65■□□□□ 0.74
CDIP1-201ENST00000399599 C11orf95C9JLR9 678 aaPredicted RBP19.65■□□□□ 0.74
CDIP1-201ENST00000399599 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
CDIP1-201ENST00000399599 NUP155O75694 1391 aa19.62■□□□□ 0.73
CDIP1-201ENST00000399599 NCOA1Q15788 1441 aa19.61■□□□□ 0.73
CDIP1-201ENST00000399599 AKNAQ7Z591 1439 aa19.59■□□□□ 0.73
CDIP1-201ENST00000399599 ANP32CO43423 234 aa19.58■□□□□ 0.73
CDIP1-201ENST00000399599 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
CDIP1-201ENST00000399599 ABCA8O94911 1581 aa19.57■□□□□ 0.72
CDIP1-201ENST00000399599 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
CDIP1-201ENST00000399599 BCANQ96GW7 911 aa19.56■□□□□ 0.72
CDIP1-201ENST00000399599 ANKRD30BQ9BXX2 1392 aa19.55■□□□□ 0.72
CDIP1-201ENST00000399599 ANKRD30AQ9BXX3 1397 aa19.55■□□□□ 0.72
CDIP1-201ENST00000399599 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
CDIP1-201ENST00000399599 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
CDIP1-201ENST00000399599 DNMT1P26358 1616 aaKnown RBP19.55■□□□□ 0.72
CDIP1-201ENST00000399599 C9orf84Q5VXU9 1444 aa19.53■□□□□ 0.72
CDIP1-201ENST00000399599 AFAP1Q8N556 730 aa19.53■□□□□ 0.72
CDIP1-201ENST00000399599 KIF15Q9NS87 1388 aa19.52■□□□□ 0.72
CDIP1-201ENST00000399599 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.71
CDIP1-201ENST00000399599 CCDC184Q52MB2 194 aa19.51■□□□□ 0.71
CDIP1-201ENST00000399599 GCC2Q8IWJ2 1684 aa19.51■□□□□ 0.71
CDIP1-201ENST00000399599 ABCC10Q5T3U5 1492 aa19.5■□□□□ 0.71
CDIP1-201ENST00000399599 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
CDIP1-201ENST00000399599 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
CDIP1-201ENST00000399599 ROCK1Q13464 1354 aa19.5■□□□□ 0.71
CDIP1-201ENST00000399599 PZPP20742 1482 aa19.49■□□□□ 0.71
CDIP1-201ENST00000399599 CDC42BPAQ5VT25 1732 aa19.47■□□□□ 0.71
CDIP1-201ENST00000399599 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
CDIP1-201ENST00000399599 SYCP2Q9BX26 1530 aa19.42■□□□□ 0.7
CDIP1-201ENST00000399599 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
CDIP1-201ENST00000399599 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
CDIP1-201ENST00000399599 ITSN2Q9NZM3 1697 aa19.4■□□□□ 0.7
CDIP1-201ENST00000399599 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
CDIP1-201ENST00000399599 MBD5Q9P267 1494 aa19.39■□□□□ 0.69
CDIP1-201ENST00000399599 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
CDIP1-201ENST00000399599 KIAA1107Q9UPP5 1409 aa19.38■□□□□ 0.69
CDIP1-201ENST00000399599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDIP1-201ENST00000399599 SAMD9LQ8IVG5 1584 aa19.37■□□□□ 0.69
CDIP1-201ENST00000399599 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDIP1-201ENST00000399599 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
CDIP1-201ENST00000399599 EFCAB2Q5VUJ9 269 aa19.36■□□□□ 0.69
CDIP1-201ENST00000399599 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
CDIP1-201ENST00000399599 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
CDIP1-201ENST00000399599 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
CDIP1-201ENST00000399599 ARHGEF12Q9NZN5 1544 aa19.34■□□□□ 0.69
CDIP1-201ENST00000399599 CDC42BPBQ9Y5S2 1711 aa19.34■□□□□ 0.69
CDIP1-201ENST00000399599 TEX14Q8IWB6 1497 aa19.34■□□□□ 0.69
CDIP1-201ENST00000399599 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
CDIP1-201ENST00000399599 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
CDIP1-201ENST00000399599 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
CDIP1-201ENST00000399599 ABCC2Q92887 1545 aa19.32■□□□□ 0.68
CDIP1-201ENST00000399599 SUPT16HQ9Y5B9 1047 aaKnown RBP19.32■□□□□ 0.68
CDIP1-201ENST00000399599 CCDC141Q6ZP82 1450 aa19.32■□□□□ 0.68
CDIP1-201ENST00000399599 FKBP8Q14318 412 aa19.3■□□□□ 0.68
CDIP1-201ENST00000399599 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
CDIP1-201ENST00000399599 CCDC7Q96M83 1385 aa19.3■□□□□ 0.68
CDIP1-201ENST00000399599 SPAG9O60271 1321 aaKnown RBP19.29■□□□□ 0.68
CDIP1-201ENST00000399599 USP47Q96K76 1375 aa19.29■□□□□ 0.68
CDIP1-201ENST00000399599 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
CDIP1-201ENST00000399599 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
CDIP1-201ENST00000399599 KIF3BO15066 747 aa19.27■□□□□ 0.68
CDIP1-201ENST00000399599 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
CDIP1-201ENST00000399599 ADGBQ8N7X0 1667 aa19.25■□□□□ 0.67
CDIP1-201ENST00000399599 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
CDIP1-201ENST00000399599 CROCC2H7BZ55 1655 aa19.25■□□□□ 0.67
CDIP1-201ENST00000399599 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDIP1-201ENST00000399599 ZCCHC11Q5TAX3 1644 aaKnown RBP19.24■□□□□ 0.67
CDIP1-201ENST00000399599 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
CDIP1-201ENST00000399599 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
CDIP1-201ENST00000399599 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms