RNA–Protein interactions for RNA: ENST00000399599.7

CDIP1-201, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 3,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-201ENST00000399599 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
CDIP1-201ENST00000399599 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
CDIP1-201ENST00000399599 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
CDIP1-201ENST00000399599 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
CDIP1-201ENST00000399599 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
CDIP1-201ENST00000399599 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
CDIP1-201ENST00000399599 ABCC9O60706 1549 aa24.27■■□□□ 1.48
CDIP1-201ENST00000399599 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
CDIP1-201ENST00000399599 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
CDIP1-201ENST00000399599 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
CDIP1-201ENST00000399599 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
CDIP1-201ENST00000399599 EHMT2Q96KQ7 1210 aa23.4■■□□□ 1.34
CDIP1-201ENST00000399599 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
CDIP1-201ENST00000399599 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
CDIP1-201ENST00000399599 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
CDIP1-201ENST00000399599 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
CDIP1-201ENST00000399599 NACADO15069 1562 aa23.25■■□□□ 1.31
CDIP1-201ENST00000399599 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
CDIP1-201ENST00000399599 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
CDIP1-201ENST00000399599 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
CDIP1-201ENST00000399599 TRIM41Q8WV44 630 aa23■■□□□ 1.27
CDIP1-201ENST00000399599 WIZO95785 1651 aa22.94■■□□□ 1.26
CDIP1-201ENST00000399599 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
CDIP1-201ENST00000399599 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
CDIP1-201ENST00000399599 PPARGC1BQ86YN6 1023 aaKnown RBP22.6■■□□□ 1.21
CDIP1-201ENST00000399599 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
CDIP1-201ENST00000399599 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
CDIP1-201ENST00000399599 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
CDIP1-201ENST00000399599 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
CDIP1-201ENST00000399599 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
CDIP1-201ENST00000399599 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
CDIP1-201ENST00000399599 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
CDIP1-201ENST00000399599 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
CDIP1-201ENST00000399599 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
CDIP1-201ENST00000399599 SOGA1O94964 1423 aa22.17■■□□□ 1.14
CDIP1-201ENST00000399599 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
CDIP1-201ENST00000399599 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
CDIP1-201ENST00000399599 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
CDIP1-201ENST00000399599 UBTFP17480 764 aaKnown RBP22.1■■□□□ 1.13
CDIP1-201ENST00000399599 HRCP23327 699 aa22.1■■□□□ 1.13
CDIP1-201ENST00000399599 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
CDIP1-201ENST00000399599 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
CDIP1-201ENST00000399599 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
CDIP1-201ENST00000399599 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
CDIP1-201ENST00000399599 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
CDIP1-201ENST00000399599 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
CDIP1-201ENST00000399599 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
CDIP1-201ENST00000399599 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
CDIP1-201ENST00000399599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.7■■□□□ 1.06
CDIP1-201ENST00000399599 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
CDIP1-201ENST00000399599 PELP1Q8IZL8 1130 aaKnown RBP21.57■■□□□ 1.04
CDIP1-201ENST00000399599 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
CDIP1-201ENST00000399599 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
CDIP1-201ENST00000399599 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
CDIP1-201ENST00000399599 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
CDIP1-201ENST00000399599 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
CDIP1-201ENST00000399599 CCER1Q8TC90 406 aaPredicted RBP21.47■■□□□ 1.03
CDIP1-201ENST00000399599 NESP48681 1621 aa21.46■■□□□ 1.03
CDIP1-201ENST00000399599 CUX1P39880 1505 aa21.45■■□□□ 1.02
CDIP1-201ENST00000399599 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
CDIP1-201ENST00000399599 EEA1Q15075 1411 aa21.42■■□□□ 1.02
CDIP1-201ENST00000399599 CLIP1P30622 1438 aa21.41■■□□□ 1.02
CDIP1-201ENST00000399599 CFTRP13569 1480 aa21.4■■□□□ 1.02
CDIP1-201ENST00000399599 P3H3Q8IVL6 736 aa21.39■■□□□ 1.02
CDIP1-201ENST00000399599 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
CDIP1-201ENST00000399599 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.01
CDIP1-201ENST00000399599 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
CDIP1-201ENST00000399599 APLP2Q06481 763 aa21.36■■□□□ 1.01
CDIP1-201ENST00000399599 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1.01
CDIP1-201ENST00000399599 CUX2O14529 1486 aa21.3■■□□□ 1
CDIP1-201ENST00000399599 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
CDIP1-201ENST00000399599 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
CDIP1-201ENST00000399599 ITGAEP38570 1179 aa21.24■□□□□ 0.99
CDIP1-201ENST00000399599 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
CDIP1-201ENST00000399599 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
CDIP1-201ENST00000399599 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.99
CDIP1-201ENST00000399599 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
CDIP1-201ENST00000399599 KIF21BO75037 1637 aa21.17■□□□□ 0.98
CDIP1-201ENST00000399599 IGF1RP08069 1367 aa21.14■□□□□ 0.98
CDIP1-201ENST00000399599 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
CDIP1-201ENST00000399599 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
CDIP1-201ENST00000399599 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
CDIP1-201ENST00000399599 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
CDIP1-201ENST00000399599 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.97
CDIP1-201ENST00000399599 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
CDIP1-201ENST00000399599 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
CDIP1-201ENST00000399599 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
CDIP1-201ENST00000399599 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
CDIP1-201ENST00000399599 ARHGAP35Q9NRY4 1499 aa20.94■□□□□ 0.94
CDIP1-201ENST00000399599 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
CDIP1-201ENST00000399599 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
CDIP1-201ENST00000399599 MYT1Q01538 1121 aa20.87■□□□□ 0.93
CDIP1-201ENST00000399599 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
CDIP1-201ENST00000399599 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
CDIP1-201ENST00000399599 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
CDIP1-201ENST00000399599 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
CDIP1-201ENST00000399599 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
CDIP1-201ENST00000399599 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
CDIP1-201ENST00000399599 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
CDIP1-201ENST00000399599 FBLN2P98095 1184 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms