RNA–Protein interactions for RNA: ENST00000399562.8

C22orf39-202, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-202ENST00000399562 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
C22orf39-202ENST00000399562 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
C22orf39-202ENST00000399562 WASHC2CQ9Y4E1 1318 aa16.07■□□□□ 0.16
C22orf39-202ENST00000399562 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
C22orf39-202ENST00000399562 KIF21BO75037 1637 aa16.07■□□□□ 0.16
C22orf39-202ENST00000399562 PRDM4Q9UKN5 801 aa16.06■□□□□ 0.16
C22orf39-202ENST00000399562 CNPY4Q8N129 248 aa16.05■□□□□ 0.16
C22orf39-202ENST00000399562 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
C22orf39-202ENST00000399562 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
C22orf39-202ENST00000399562 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
C22orf39-202ENST00000399562 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
C22orf39-202ENST00000399562 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
C22orf39-202ENST00000399562 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
C22orf39-202ENST00000399562 RRAGDQ9NQL2 400 aaPredicted RBP16.02■□□□□ 0.16
C22orf39-202ENST00000399562 E9PSI1 815 aa16.02■□□□□ 0.15
C22orf39-202ENST00000399562 WWC1Q8IX03 1113 aa16■□□□□ 0.15
C22orf39-202ENST00000399562 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
C22orf39-202ENST00000399562 CALD1Q05682 793 aaKnown RBP15.99■□□□□ 0.15
C22orf39-202ENST00000399562 ZNF830Q96NB3 372 aaPredicted RBP15.99■□□□□ 0.15
C22orf39-202ENST00000399562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.97■□□□□ 0.15
C22orf39-202ENST00000399562 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
C22orf39-202ENST00000399562 CDK11BP21127 795 aaKnown RBP15.96■□□□□ 0.15
C22orf39-202ENST00000399562 DCAF11Q8TEB1 546 aa15.96■□□□□ 0.15
C22orf39-202ENST00000399562 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
C22orf39-202ENST00000399562 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.151e-7■■□□□ 13.1
C22orf39-202ENST00000399562 FHOD3Q2V2M9 1422 aa15.96■□□□□ 0.15
C22orf39-202ENST00000399562 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
C22orf39-202ENST00000399562 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
C22orf39-202ENST00000399562 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
C22orf39-202ENST00000399562 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
C22orf39-202ENST00000399562 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
C22orf39-202ENST00000399562 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
C22orf39-202ENST00000399562 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
C22orf39-202ENST00000399562 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
C22orf39-202ENST00000399562 SIN3AQ96ST3 1273 aa15.9■□□□□ 0.14
C22orf39-202ENST00000399562 PATL2C9JE40 543 aaKnown RBP15.9■□□□□ 0.14
C22orf39-202ENST00000399562 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
C22orf39-202ENST00000399562 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
C22orf39-202ENST00000399562 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
C22orf39-202ENST00000399562 CERS3Q8IU89 383 aa15.87■□□□□ 0.13
C22orf39-202ENST00000399562 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
C22orf39-202ENST00000399562 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
C22orf39-202ENST00000399562 TEX2Q8IWB9 1127 aa15.86■□□□□ 0.13
C22orf39-202ENST00000399562 MTUS2Q5JR59 1369 aa15.85■□□□□ 0.13
C22orf39-202ENST00000399562 NCLP19338 710 aaKnown RBP15.84■□□□□ 0.13
C22orf39-202ENST00000399562 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
C22orf39-202ENST00000399562 CHIC2Q9UKJ5 165 aa15.84■□□□□ 0.13
C22orf39-202ENST00000399562 KCNG1Q9UIX4 513 aa15.83■□□□□ 0.12
C22orf39-202ENST00000399562 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
C22orf39-202ENST00000399562 DDRGK1Q96HY6 314 aa15.82■□□□□ 0.12
C22orf39-202ENST00000399562 CCNB3Q8WWL7 1395 aa15.82■□□□□ 0.12
C22orf39-202ENST00000399562 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
C22orf39-202ENST00000399562 NFKBIBQ15653 356 aa15.81■□□□□ 0.12
C22orf39-202ENST00000399562 APPP05067 770 aa15.8■□□□□ 0.12
C22orf39-202ENST00000399562 TPRNQ4KMQ1 711 aa15.79■□□□□ 0.12
C22orf39-202ENST00000399562 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
C22orf39-202ENST00000399562 FAM13BQ9NYF5 915 aa15.78■□□□□ 0.12
C22orf39-202ENST00000399562 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
C22orf39-202ENST00000399562 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
C22orf39-202ENST00000399562 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.12
C22orf39-202ENST00000399562 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.11
C22orf39-202ENST00000399562 HNRNPUQ00839 825 aaKnown RBP eCLIP15.76■□□□□ 0.116e-6■□□□□ 9.6
C22orf39-202ENST00000399562 BCCIPQ9P287 314 aaKnown RBP eCLIP15.76■□□□□ 0.11
C22orf39-202ENST00000399562 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
C22orf39-202ENST00000399562 TMEM51Q9NW97 253 aa15.75■□□□□ 0.11
C22orf39-202ENST00000399562 TMED8Q6PL24 325 aaPredicted RBP15.75■□□□□ 0.11
C22orf39-202ENST00000399562 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
C22orf39-202ENST00000399562 IRX3P78415 501 aaPredicted RBP15.75■□□□□ 0.11
C22orf39-202ENST00000399562 ZBTB22O15209 634 aa15.73■□□□□ 0.11
C22orf39-202ENST00000399562 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
C22orf39-202ENST00000399562 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
C22orf39-202ENST00000399562 SOX12O15370 315 aa15.72■□□□□ 0.11
C22orf39-202ENST00000399562 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
C22orf39-202ENST00000399562 PPP4R3BQ5MIZ7 849 aa15.71■□□□□ 0.11
C22orf39-202ENST00000399562 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
C22orf39-202ENST00000399562 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
C22orf39-202ENST00000399562 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
C22orf39-202ENST00000399562 ZBTB9Q96C00 473 aa15.68■□□□□ 0.1
C22orf39-202ENST00000399562 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
C22orf39-202ENST00000399562 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
C22orf39-202ENST00000399562 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
C22orf39-202ENST00000399562 FRAT2O75474 233 aaPredicted RBP15.66■□□□□ 0.1
C22orf39-202ENST00000399562 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
C22orf39-202ENST00000399562 FAM193AP78312 1265 aa15.66■□□□□ 0.1
C22orf39-202ENST00000399562 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
C22orf39-202ENST00000399562 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
C22orf39-202ENST00000399562 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
C22orf39-202ENST00000399562 HDAC5Q9UQL6 1122 aa15.63■□□□□ 0.09
C22orf39-202ENST00000399562 RGS22Q8NE09 1264 aa15.62■□□□□ 0.09
C22orf39-202ENST00000399562 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
C22orf39-202ENST00000399562 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
C22orf39-202ENST00000399562 CLCN1P35523 988 aa15.61■□□□□ 0.09
C22orf39-202ENST00000399562 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
C22orf39-202ENST00000399562 CASKIN1Q8WXD9 1431 aa15.59■□□□□ 0.09
C22orf39-202ENST00000399562 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
C22orf39-202ENST00000399562 CGNQ9P2M7 1197 aaKnown RBP15.59■□□□□ 0.09
C22orf39-202ENST00000399562 RRBP1Q9P2E9 1410 aaKnown RBP15.59■□□□□ 0.09
C22orf39-202ENST00000399562 TPM2P07951 284 aa15.58■□□□□ 0.09
C22orf39-202ENST00000399562 KIAA1211Q6ZU35 1233 aa15.58■□□□□ 0.08
C22orf39-202ENST00000399562 SMAP1Q8IYB5 467 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms