RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 HECW1Q76N89 1606 aa13.58□□□□□ -0.24
BRCC3-205ENST00000399026 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
BRCC3-205ENST00000399026 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
BRCC3-205ENST00000399026 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
BRCC3-205ENST00000399026 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
BRCC3-205ENST00000399026 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
BRCC3-205ENST00000399026 CDK13Q14004 1512 aaKnown RBP13.55□□□□□ -0.24
BRCC3-205ENST00000399026 TSPOAP1O95153 1857 aa13.55□□□□□ -0.24
BRCC3-205ENST00000399026 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
BRCC3-205ENST00000399026 ATP10BO94823 1461 aa13.54□□□□□ -0.24
BRCC3-205ENST00000399026 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
BRCC3-205ENST00000399026 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
BRCC3-205ENST00000399026 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
BRCC3-205ENST00000399026 GLI2P10070 1586 aa13.51□□□□□ -0.25
BRCC3-205ENST00000399026 FAM69CQ0P6D2 419 aa13.5□□□□□ -0.25
BRCC3-205ENST00000399026 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
BRCC3-205ENST00000399026 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
BRCC3-205ENST00000399026 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
BRCC3-205ENST00000399026 ZNF692Q9BU19 519 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-205ENST00000399026 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-205ENST00000399026 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
BRCC3-205ENST00000399026 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
BRCC3-205ENST00000399026 ABCA9Q8IUA7 1624 aa13.45□□□□□ -0.26
BRCC3-205ENST00000399026 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
BRCC3-205ENST00000399026 TTC37Q6PGP7 1564 aa13.44□□□□□ -0.26
BRCC3-205ENST00000399026 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
BRCC3-205ENST00000399026 KIF14Q15058 1648 aa13.43□□□□□ -0.26
BRCC3-205ENST00000399026 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
BRCC3-205ENST00000399026 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
BRCC3-205ENST00000399026 KDM6BO15054 1643 aa13.4□□□□□ -0.26
BRCC3-205ENST00000399026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.27
BRCC3-205ENST00000399026 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
BRCC3-205ENST00000399026 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
BRCC3-205ENST00000399026 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
BRCC3-205ENST00000399026 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
BRCC3-205ENST00000399026 TROQ12816 1431 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-205ENST00000399026 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
BRCC3-205ENST00000399026 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
BRCC3-205ENST00000399026 TIAM1Q13009 1591 aa13.33□□□□□ -0.28
BRCC3-205ENST00000399026 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
BRCC3-205ENST00000399026 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
BRCC3-205ENST00000399026 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
BRCC3-205ENST00000399026 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
BRCC3-205ENST00000399026 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
BRCC3-205ENST00000399026 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
BRCC3-205ENST00000399026 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
BRCC3-205ENST00000399026 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
BRCC3-205ENST00000399026 CDC42BPBQ9Y5S2 1711 aa13.29□□□□□ -0.28
BRCC3-205ENST00000399026 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
BRCC3-205ENST00000399026 FANCAO15360 1455 aa13.28□□□□□ -0.28
BRCC3-205ENST00000399026 FRMPD1Q5SYB0 1578 aa13.28□□□□□ -0.28
BRCC3-205ENST00000399026 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
BRCC3-205ENST00000399026 NEO1Q92859 1461 aa13.27□□□□□ -0.29
BRCC3-205ENST00000399026 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
BRCC3-205ENST00000399026 SUPT6HQ7KZ85 1726 aaKnown RBP13.26□□□□□ -0.29
BRCC3-205ENST00000399026 ARAP3Q8WWN8 1544 aa13.25□□□□□ -0.29
BRCC3-205ENST00000399026 ITSN2Q9NZM3 1697 aa13.24□□□□□ -0.29
BRCC3-205ENST00000399026 PLCH2O75038 1416 aa13.24□□□□□ -0.29
BRCC3-205ENST00000399026 RICTORQ6R327 1708 aa13.24□□□□□ -0.29
BRCC3-205ENST00000399026 HAX1O00165 279 aa13.23□□□□□ -0.29
BRCC3-205ENST00000399026 ADGRL1O94910 1474 aa13.23□□□□□ -0.29
BRCC3-205ENST00000399026 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
BRCC3-205ENST00000399026 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
BRCC3-205ENST00000399026 ABCC1P33527 1531 aa13.21□□□□□ -0.29
BRCC3-205ENST00000399026 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
BRCC3-205ENST00000399026 NCOA2Q15596 1464 aa13.21□□□□□ -0.3
BRCC3-205ENST00000399026 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
BRCC3-205ENST00000399026 GPATCH8Q9UKJ3 1502 aaKnown RBP13.19□□□□□ -0.3
BRCC3-205ENST00000399026 POGZQ7Z3K3 1410 aa13.18□□□□□ -0.3
BRCC3-205ENST00000399026 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
BRCC3-205ENST00000399026 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
BRCC3-205ENST00000399026 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
BRCC3-205ENST00000399026 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
BRCC3-205ENST00000399026 DENND4BO75064 1496 aaPredicted RBP13.17□□□□□ -0.3
BRCC3-205ENST00000399026 ZMYM4Q5VZL5 1548 aa13.17□□□□□ -0.3
BRCC3-205ENST00000399026 RAPGEF3O95398 923 aa13.16□□□□□ -0.3
BRCC3-205ENST00000399026 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
BRCC3-205ENST00000399026 SCAPERQ9BY12 1400 aa13.15□□□□□ -0.3
BRCC3-205ENST00000399026 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
BRCC3-205ENST00000399026 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
BRCC3-205ENST00000399026 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
BRCC3-205ENST00000399026 KDM5CP41229 1560 aa13.14□□□□□ -0.31
BRCC3-205ENST00000399026 HECW2Q9P2P5 1572 aa13.13□□□□□ -0.31
BRCC3-205ENST00000399026 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
BRCC3-205ENST00000399026 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
BRCC3-205ENST00000399026 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
BRCC3-205ENST00000399026 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
BRCC3-205ENST00000399026 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
BRCC3-205ENST00000399026 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
BRCC3-205ENST00000399026 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
BRCC3-205ENST00000399026 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
BRCC3-205ENST00000399026 YEATS2Q9ULM3 1422 aa13.1□□□□□ -0.31
BRCC3-205ENST00000399026 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
BRCC3-205ENST00000399026 CFDP1Q9UEE9 299 aaPredicted RBP13.09□□□□□ -0.31
BRCC3-205ENST00000399026 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
BRCC3-205ENST00000399026 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
BRCC3-205ENST00000399026 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
BRCC3-205ENST00000399026 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
BRCC3-205ENST00000399026 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
BRCC3-205ENST00000399026 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms