RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 CFDP1Q9UEE9 299 aaPredicted RBP27.6■■■□□ 2.01
MBD1-208ENST00000398493 CDC42BPBQ9Y5S2 1711 aa27.6■■■□□ 2.01
MBD1-208ENST00000398493 CCER1Q8TC90 406 aaPredicted RBP27.59■■■□□ 2.01
MBD1-208ENST00000398493 FANCAO15360 1455 aa27.59■■■□□ 2.01
MBD1-208ENST00000398493 PREX2Q70Z35 1606 aa27.58■■■□□ 2.01
MBD1-208ENST00000398493 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
MBD1-208ENST00000398493 ARHGAP5Q13017 1502 aa27.58■■■□□ 2.01
MBD1-208ENST00000398493 ZNF777Q9ULD5 760 aaPredicted RBP27.57■■■□□ 2
MBD1-208ENST00000398493 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
MBD1-208ENST00000398493 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
MBD1-208ENST00000398493 MYOM3Q5VTT5 1437 aa27.56■■■□□ 2
MBD1-208ENST00000398493 ZNF644Q9H582 1327 aaPredicted RBP27.56■■■□□ 2
MBD1-208ENST00000398493 AKNAQ7Z591 1439 aa27.53■■■□□ 2
MBD1-208ENST00000398493 NEO1Q92859 1461 aa27.51■■■□□ 2
MBD1-208ENST00000398493 COL17A1Q9UMD9 1497 aaPredicted RBP27.5■■□□□ 1.99
MBD1-208ENST00000398493 ITSN2Q9NZM3 1697 aa27.49■■□□□ 1.99
MBD1-208ENST00000398493 SAMD9LQ8IVG5 1584 aa27.47■■□□□ 1.99
MBD1-208ENST00000398493 FGD6Q6ZV73 1430 aa27.47■■□□□ 1.99
MBD1-208ENST00000398493 MIA2Q96PC5 1412 aa27.47■■□□□ 1.99
MBD1-208ENST00000398493 ARHGEF12Q9NZN5 1544 aa27.45■■□□□ 1.99
MBD1-208ENST00000398493 ADGRL1O94910 1474 aa27.45■■□□□ 1.98
MBD1-208ENST00000398493 SCAPERQ9BY12 1400 aa27.44■■□□□ 1.98
MBD1-208ENST00000398493 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.98
MBD1-208ENST00000398493 RAPGEF3O95398 923 aa27.43■■□□□ 1.98
MBD1-208ENST00000398493 RRBP1Q9P2E9 1410 aaKnown RBP27.42■■□□□ 1.98
MBD1-208ENST00000398493 CFAP74Q9C0B2 1584 aa27.42■■□□□ 1.98
MBD1-208ENST00000398493 CAMSAP2Q08AD1 1489 aa27.42■■□□□ 1.98
MBD1-208ENST00000398493 ABCC1P33527 1531 aa27.4■■□□□ 1.98
MBD1-208ENST00000398493 AFAP1Q8N556 730 aa27.38■■□□□ 1.97
MBD1-208ENST00000398493 SYCP2Q9BX26 1530 aa27.38■■□□□ 1.97
MBD1-208ENST00000398493 PTPN23Q9H3S7 1636 aa27.37■■□□□ 1.97
MBD1-208ENST00000398493 KIAA1107Q9UPP5 1409 aa27.37■■□□□ 1.97
MBD1-208ENST00000398493 TRAPPC8Q9Y2L5 1435 aa27.37■■□□□ 1.97
MBD1-208ENST00000398493 DENND4BO75064 1496 aaPredicted RBP27.36■■□□□ 1.97
MBD1-208ENST00000398493 MBD5Q9P267 1494 aa27.36■■□□□ 1.97
MBD1-208ENST00000398493 TCOF1Q13428 1488 aaKnown RBP27.36■■□□□ 1.97
MBD1-208ENST00000398493 FAM50AQ14320 339 aaKnown RBP27.35■■□□□ 1.97
MBD1-208ENST00000398493 PLEKHH2Q8IVE3 1493 aa27.34■■□□□ 1.97
MBD1-208ENST00000398493 KDM6BO15054 1643 aa27.34■■□□□ 1.97
MBD1-208ENST00000398493 POGZQ7Z3K3 1410 aa27.32■■□□□ 1.96
MBD1-208ENST00000398493 FRMPD1Q5SYB0 1578 aa27.3■■□□□ 1.96
MBD1-208ENST00000398493 RICTORQ6R327 1708 aa27.26■■□□□ 1.96
MBD1-208ENST00000398493 ZNF518AQ6AHZ1 1483 aa27.26■■□□□ 1.95
MBD1-208ENST00000398493 ABCC5O15440 1437 aa27.24■■□□□ 1.95
MBD1-208ENST00000398493 CCDC141Q6ZP82 1450 aa27.23■■□□□ 1.95
MBD1-208ENST00000398493 RSPH4AQ5TD94 716 aa27.23■■□□□ 1.95
MBD1-208ENST00000398493 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
MBD1-208ENST00000398493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.21■■□□□ 1.95
MBD1-208ENST00000398493 KDM5CP41229 1560 aa27.21■■□□□ 1.95
MBD1-208ENST00000398493 ITGAEP38570 1179 aa27.2■■□□□ 1.95
MBD1-208ENST00000398493 DAPK1P53355 1430 aa27.2■■□□□ 1.95
MBD1-208ENST00000398493 SPAG9O60271 1321 aaKnown RBP27.19■■□□□ 1.94
MBD1-208ENST00000398493 PTPRKQ15262 1439 aa27.19■■□□□ 1.94
MBD1-208ENST00000398493 TSPY4P0CV99 314 aa27.18■■□□□ 1.94
MBD1-208ENST00000398493 TSPY10P0CW01 314 aa27.18■■□□□ 1.94
MBD1-208ENST00000398493 DNMT1P26358 1616 aaKnown RBP27.17■■□□□ 1.94
MBD1-208ENST00000398493 CHIC2Q9UKJ5 165 aa27.16■■□□□ 1.94
MBD1-208ENST00000398493 MYT1LQ9UL68 1186 aa27.16■■□□□ 1.94
MBD1-208ENST00000398493 ZMYM4Q5VZL5 1548 aa27.16■■□□□ 1.94
MBD1-208ENST00000398493 YEATS2Q9ULM3 1422 aa27.16■■□□□ 1.94
MBD1-208ENST00000398493 MLH3Q9UHC1 1453 aa27.15■■□□□ 1.94
MBD1-208ENST00000398493 C9orf84Q5VXU9 1444 aa27.13■■□□□ 1.93
MBD1-208ENST00000398493 ZFYVE16Q7Z3T8 1539 aa27.11■■□□□ 1.93
MBD1-208ENST00000398493 HECW2Q9P2P5 1572 aa27.11■■□□□ 1.93
MBD1-208ENST00000398493 KIDINS220Q9ULH0 1771 aa27.1■■□□□ 1.93
MBD1-208ENST00000398493 MAGI2Q86UL8 1455 aa27.1■■□□□ 1.93
MBD1-208ENST00000398493 RTEL1-TNFRSF6BF6WH68 1400 aa27.09■■□□□ 1.93
MBD1-208ENST00000398493 ATP7AQ04656 1500 aa27.09■■□□□ 1.93
MBD1-208ENST00000398493 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
MBD1-208ENST00000398493 SHANK2Q9UPX8 1470 aa27.08■■□□□ 1.93
MBD1-208ENST00000398493 CROCC2H7BZ55 1655 aa27.07■■□□□ 1.92
MBD1-208ENST00000398493 MAST1Q9Y2H9 1570 aa27.06■■□□□ 1.92
MBD1-208ENST00000398493 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
MBD1-208ENST00000398493 RRP7BPQ9NSQ0 103 aa27.04■■□□□ 1.92
MBD1-208ENST00000398493 ABCA6Q8N139 1617 aa27.04■■□□□ 1.92
MBD1-208ENST00000398493 DIP2CQ9Y2E4 1556 aa27.03■■□□□ 1.92
MBD1-208ENST00000398493 NCOA1Q15788 1441 aa27.02■■□□□ 1.92
MBD1-208ENST00000398493 ARHGEF40Q8TER5 1519 aa27.01■■□□□ 1.92
MBD1-208ENST00000398493 ATP10AO60312 1499 aa27■■□□□ 1.91
MBD1-208ENST00000398493 ADGRL2O95490 1459 aa26.99■■□□□ 1.91
MBD1-208ENST00000398493 ANKRD30AQ9BXX3 1397 aa26.98■■□□□ 1.91
MBD1-208ENST00000398493 KIF15Q9NS87 1388 aa26.97■■□□□ 1.91
MBD1-208ENST00000398493 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
MBD1-208ENST00000398493 PLXNC1O60486 1568 aa26.94■■□□□ 1.9
MBD1-208ENST00000398493 DHX57Q6P158 1386 aaKnown RBP26.94■■□□□ 1.9
MBD1-208ENST00000398493 A2MP01023 1474 aa26.94■■□□□ 1.9
MBD1-208ENST00000398493 SIGLEC1Q9BZZ2 1709 aa26.94■■□□□ 1.9
MBD1-208ENST00000398493 DHX29Q7Z478 1369 aaKnown RBP26.94■■□□□ 1.9
MBD1-208ENST00000398493 ADGBQ8N7X0 1667 aa26.92■■□□□ 1.9
MBD1-208ENST00000398493 SETD5Q9C0A6 1442 aa26.92■■□□□ 1.9
MBD1-208ENST00000398493 RAB3GAP2Q9H2M9 1393 aa26.88■■□□□ 1.89
MBD1-208ENST00000398493 ARID4BQ4LE39 1312 aaPredicted RBP26.88■■□□□ 1.89
MBD1-208ENST00000398493 REREQ9P2R6 1566 aa26.87■■□□□ 1.89
MBD1-208ENST00000398493 DUOX2Q9NRD8 1548 aa26.87■■□□□ 1.89
MBD1-208ENST00000398493 NAIPQ13075 1403 aa26.86■■□□□ 1.89
MBD1-208ENST00000398493 HFM1A2PYH4 1435 aa26.84■■□□□ 1.89
MBD1-208ENST00000398493 ANKRD50Q9ULJ7 1429 aa26.84■■□□□ 1.89
MBD1-208ENST00000398493 KIF3BO15066 747 aa26.83■■□□□ 1.89
MBD1-208ENST00000398493 MLECQ14165 292 aa26.83■■□□□ 1.89
MBD1-208ENST00000398493 AGLP35573 1532 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms