RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
SMARCE1P6-201ENST00000398372 FER1L4A9Z1Z3 1794 aa10.46□□□□□ -0.74
SMARCE1P6-201ENST00000398372 PREX1Q8TCU6 1659 aa10.45□□□□□ -0.74
SMARCE1P6-201ENST00000398372 LTBP4Q8N2S1 1624 aa10.45□□□□□ -0.74
SMARCE1P6-201ENST00000398372 TTC37Q6PGP7 1564 aa10.45□□□□□ -0.74
SMARCE1P6-201ENST00000398372 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
SMARCE1P6-201ENST00000398372 DENND4BO75064 1496 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1P6-201ENST00000398372 FAM9AQ8IZU1 332 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1P6-201ENST00000398372 FANCAO15360 1455 aa10.43□□□□□ -0.74
SMARCE1P6-201ENST00000398372 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
SMARCE1P6-201ENST00000398372 EEA1Q15075 1411 aa10.43□□□□□ -0.74
SMARCE1P6-201ENST00000398372 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
SMARCE1P6-201ENST00000398372 POGZQ7Z3K3 1410 aa10.42□□□□□ -0.74
SMARCE1P6-201ENST00000398372 AKNAQ7Z591 1439 aa10.41□□□□□ -0.74
SMARCE1P6-201ENST00000398372 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
SMARCE1P6-201ENST00000398372 ARHGEF12Q9NZN5 1544 aa10.4□□□□□ -0.74
SMARCE1P6-201ENST00000398372 RNF39Q9H2S5 420 aa10.4□□□□□ -0.74
SMARCE1P6-201ENST00000398372 PTPRTO14522 1441 aa10.4□□□□□ -0.75
SMARCE1P6-201ENST00000398372 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
SMARCE1P6-201ENST00000398372 HECW1Q76N89 1606 aa10.38□□□□□ -0.75
SMARCE1P6-201ENST00000398372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1P6-201ENST00000398372 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
SMARCE1P6-201ENST00000398372 EFCAB5A4FU69 1503 aa10.37□□□□□ -0.75
SMARCE1P6-201ENST00000398372 UBAP1LF5GYI3 381 aa10.36□□□□□ -0.75
SMARCE1P6-201ENST00000398372 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
SMARCE1P6-201ENST00000398372 RANGAP1P46060 587 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1P6-201ENST00000398372 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
SMARCE1P6-201ENST00000398372 UHRF1BP1Q6BDS2 1440 aa10.35□□□□□ -0.75
SMARCE1P6-201ENST00000398372 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
SMARCE1P6-201ENST00000398372 SAMD9Q5K651 1589 aa10.35□□□□□ -0.75
SMARCE1P6-201ENST00000398372 RAPGEF6Q8TEU7 1601 aa10.34□□□□□ -0.75
SMARCE1P6-201ENST00000398372 ATP10AO60312 1499 aa10.34□□□□□ -0.75
SMARCE1P6-201ENST00000398372 MAGI2Q86UL8 1455 aa10.34□□□□□ -0.75
SMARCE1P6-201ENST00000398372 MED1Q15648 1581 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1P6-201ENST00000398372 SETD1BQ9UPS6 1966 aaKnown RBP10.34□□□□□ -0.75
SMARCE1P6-201ENST00000398372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCE1P6-201ENST00000398372 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
SMARCE1P6-201ENST00000398372 NUP153P49790 1475 aaKnown RBP10.33□□□□□ -0.76
SMARCE1P6-201ENST00000398372 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1P6-201ENST00000398372 HSPA1LP34931 641 aa10.32□□□□□ -0.76
SMARCE1P6-201ENST00000398372 SCAPERQ9BY12 1400 aa10.32□□□□□ -0.76
SMARCE1P6-201ENST00000398372 C3P01024 1663 aa10.31□□□□□ -0.76
SMARCE1P6-201ENST00000398372 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
SMARCE1P6-201ENST00000398372 NCOA1Q15788 1441 aa10.31□□□□□ -0.76
SMARCE1P6-201ENST00000398372 NCKAP5LQ9HCH0 1330 aa10.31□□□□□ -0.76
SMARCE1P6-201ENST00000398372 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
SMARCE1P6-201ENST00000398372 C9orf84Q5VXU9 1444 aa10.3□□□□□ -0.76
SMARCE1P6-201ENST00000398372 PLEKHD1A6NEE1 506 aa10.29□□□□□ -0.76
SMARCE1P6-201ENST00000398372 AMER1Q5JTC6 1135 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1P6-201ENST00000398372 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
SMARCE1P6-201ENST00000398372 CAMSAP1Q5T5Y3 1602 aa10.26□□□□□ -0.77
SMARCE1P6-201ENST00000398372 PIP4K2BP78356 416 aa10.26□□□□□ -0.77
SMARCE1P6-201ENST00000398372 TRAPPC8Q9Y2L5 1435 aa10.25□□□□□ -0.77
SMARCE1P6-201ENST00000398372 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
SMARCE1P6-201ENST00000398372 PLCH2O75038 1416 aa10.24□□□□□ -0.77
SMARCE1P6-201ENST00000398372 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
SMARCE1P6-201ENST00000398372 RGS17Q9UGC6 210 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1P6-201ENST00000398372 ARHGAP35Q9NRY4 1499 aa10.21□□□□□ -0.78
SMARCE1P6-201ENST00000398372 C1QBPQ07021 282 aaKnown RBP10.2□□□□□ -0.78
SMARCE1P6-201ENST00000398372 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
SMARCE1P6-201ENST00000398372 ABCA6Q8N139 1617 aa10.2□□□□□ -0.78
SMARCE1P6-201ENST00000398372 EFCAB2Q5VUJ9 269 aa10.19□□□□□ -0.78
SMARCE1P6-201ENST00000398372 ATP1B4Q9UN42 357 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1P6-201ENST00000398372 ALKQ9UM73 1620 aa10.18□□□□□ -0.78
SMARCE1P6-201ENST00000398372 KDM5CP41229 1560 aa10.18□□□□□ -0.78
SMARCE1P6-201ENST00000398372 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
SMARCE1P6-201ENST00000398372 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
SMARCE1P6-201ENST00000398372 FMN1Q68DA7 1419 aa10.17□□□□□ -0.78
SMARCE1P6-201ENST00000398372 HOXD11P31277 338 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1P6-201ENST00000398372 REREQ9P2R6 1566 aa10.17□□□□□ -0.78
SMARCE1P6-201ENST00000398372 ZNF518AQ6AHZ1 1483 aa10.17□□□□□ -0.78
SMARCE1P6-201ENST00000398372 MYO5CQ9NQX4 1742 aa10.16□□□□□ -0.78
SMARCE1P6-201ENST00000398372 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
SMARCE1P6-201ENST00000398372 AGLP35573 1532 aa10.16□□□□□ -0.78
SMARCE1P6-201ENST00000398372 TCOF1Q13428 1488 aaKnown RBP10.16□□□□□ -0.78
SMARCE1P6-201ENST00000398372 ZMYM3Q14202 1370 aa10.15□□□□□ -0.78
SMARCE1P6-201ENST00000398372 TOM1O60784 492 aa10.15□□□□□ -0.78
SMARCE1P6-201ENST00000398372 PKD2Q13563 968 aa10.15□□□□□ -0.78
SMARCE1P6-201ENST00000398372 NPATQ14207 1427 aa10.15□□□□□ -0.79
SMARCE1P6-201ENST00000398372 KIF14Q15058 1648 aa10.15□□□□□ -0.79
SMARCE1P6-201ENST00000398372 SUPT6HQ7KZ85 1726 aaKnown RBP10.14□□□□□ -0.79
SMARCE1P6-201ENST00000398372 PLA2R1Q13018 1463 aa10.13□□□□□ -0.79
SMARCE1P6-201ENST00000398372 MLH3Q9UHC1 1453 aa10.13□□□□□ -0.79
SMARCE1P6-201ENST00000398372 MYO3AQ8NEV4 1616 aa10.13□□□□□ -0.79
SMARCE1P6-201ENST00000398372 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
SMARCE1P6-201ENST00000398372 ZNF142P52746 1687 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CNTLNQ9NXG0 1405 aa10.12□□□□□ -0.79
SMARCE1P6-201ENST00000398372 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
SMARCE1P6-201ENST00000398372 KIDINS220Q9ULH0 1771 aa10.11□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CEP170BQ9Y4F5 1589 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1P6-201ENST00000398372 POTEAQ6S8J7 498 aa10.11□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CDK11AQ9UQ88 783 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1P6-201ENST00000398372 ARHGAP5Q13017 1502 aa10.11□□□□□ -0.79
SMARCE1P6-201ENST00000398372 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
SMARCE1P6-201ENST00000398372 PTPRKQ15262 1439 aa10.1□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CLTCQ00610 1675 aaKnown RBP10.1□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CLIP1P30622 1438 aa10.09□□□□□ -0.79
SMARCE1P6-201ENST00000398372 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
SMARCE1P6-201ENST00000398372 CASKIN1Q8WXD9 1431 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms