RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SRPK2P78362 688 aaKnown RBP20.06■□□□□ 0.8
GNE-202ENST00000396594 TERF2IPQ9NYB0 399 aa20.06■□□□□ 0.8
GNE-202ENST00000396594 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
GNE-202ENST00000396594 MCCP23508 829 aa20.05■□□□□ 0.8
GNE-202ENST00000396594 LMOD3Q0VAK6 560 aa20.04■□□□□ 0.8
GNE-202ENST00000396594 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
GNE-202ENST00000396594 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
GNE-202ENST00000396594 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
GNE-202ENST00000396594 NGEFQ8N5V2 710 aa20.02■□□□□ 0.8
GNE-202ENST00000396594 GOLGA6L6A8MZA4 724 aa20.02■□□□□ 0.79
GNE-202ENST00000396594 PDE3BQ13370 1112 aa20.02■□□□□ 0.79
GNE-202ENST00000396594 PTPRGP23470 1445 aa20.01■□□□□ 0.79
GNE-202ENST00000396594 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
GNE-202ENST00000396594 A0A0G2JS52 829 aa19.99■□□□□ 0.79
GNE-202ENST00000396594 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
GNE-202ENST00000396594 NRDCO43847 1150 aa19.97■□□□□ 0.79
GNE-202ENST00000396594 TRIM44Q96DX7 344 aaPredicted RBP19.97■□□□□ 0.79
GNE-202ENST00000396594 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
GNE-202ENST00000396594 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
GNE-202ENST00000396594 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
GNE-202ENST00000396594 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
GNE-202ENST00000396594 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
GNE-202ENST00000396594 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
GNE-202ENST00000396594 HSPA5P11021 654 aaKnown RBP19.95■□□□□ 0.78
GNE-202ENST00000396594 GGT6Q6P531 493 aa19.95■□□□□ 0.78
GNE-202ENST00000396594 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
GNE-202ENST00000396594 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
GNE-202ENST00000396594 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
GNE-202ENST00000396594 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
GNE-202ENST00000396594 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
GNE-202ENST00000396594 GOLGA2Q08379 1002 aa19.89■□□□□ 0.78
GNE-202ENST00000396594 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.78
GNE-202ENST00000396594 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
GNE-202ENST00000396594 LMOD2Q6P5Q4 547 aa19.89■□□□□ 0.77
GNE-202ENST00000396594 KIF3BO15066 747 aa19.89■□□□□ 0.77
GNE-202ENST00000396594 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
GNE-202ENST00000396594 VGFO15240 615 aaPredicted RBP19.88■□□□□ 0.77
GNE-202ENST00000396594 KIF15Q9NS87 1388 aa19.88■□□□□ 0.77
GNE-202ENST00000396594 KIF21BO75037 1637 aa19.88■□□□□ 0.77
GNE-202ENST00000396594 NPHP1O15259 732 aa19.88■□□□□ 0.77
GNE-202ENST00000396594 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
GNE-202ENST00000396594 PLEKHH2Q8IVE3 1493 aa19.87■□□□□ 0.77
GNE-202ENST00000396594 PMFBP1Q8TBY8 1022 aa19.86■□□□□ 0.77
GNE-202ENST00000396594 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.86■□□□□ 0.77
GNE-202ENST00000396594 CHMP4CQ96CF2 233 aa19.86■□□□□ 0.77
GNE-202ENST00000396594 RWDD1Q9H446 243 aaPredicted RBP19.86■□□□□ 0.77
GNE-202ENST00000396594 KANK4Q5T7N3 995 aaPredicted RBP19.85■□□□□ 0.77
GNE-202ENST00000396594 NLRP13Q86W25 1043 aa19.85■□□□□ 0.77
GNE-202ENST00000396594 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
GNE-202ENST00000396594 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
GNE-202ENST00000396594 HTATSF1O43719 755 aaKnown RBP19.84■□□□□ 0.77
GNE-202ENST00000396594 HSCBQ8IWL3 235 aa19.84■□□□□ 0.77
GNE-202ENST00000396594 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
GNE-202ENST00000396594 HMMRO75330 724 aa19.83■□□□□ 0.77
GNE-202ENST00000396594 IFT140Q96RY7 1462 aa19.83■□□□□ 0.77
GNE-202ENST00000396594 L1TD1Q5T7N2 865 aaKnown RBP19.83■□□□□ 0.77
GNE-202ENST00000396594 KCNJ4P48050 445 aa19.82■□□□□ 0.76
GNE-202ENST00000396594 FRAT1Q92837 279 aaPredicted RBP19.82■□□□□ 0.76
GNE-202ENST00000396594 FGD1P98174 961 aa19.82■□□□□ 0.76
GNE-202ENST00000396594 GPATCH3Q96I76 525 aa19.82■□□□□ 0.76
GNE-202ENST00000396594 HSP90AB1P08238 724 aaKnown RBP19.81■□□□□ 0.76
GNE-202ENST00000396594 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
GNE-202ENST00000396594 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
GNE-202ENST00000396594 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
GNE-202ENST00000396594 ARXQ96QS3 562 aa19.8■□□□□ 0.76
GNE-202ENST00000396594 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
GNE-202ENST00000396594 MLECQ14165 292 aa19.79■□□□□ 0.76
GNE-202ENST00000396594 CFTRP13569 1480 aa19.79■□□□□ 0.76
GNE-202ENST00000396594 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
GNE-202ENST00000396594 IGF1RP08069 1367 aa19.78■□□□□ 0.76
GNE-202ENST00000396594 TMX4Q9H1E5 349 aaPredicted RBP19.78■□□□□ 0.76
GNE-202ENST00000396594 EVC2Q86UK5 1308 aa19.77■□□□□ 0.75
GNE-202ENST00000396594 PTMAP06454 111 aaKnown RBP19.77■□□□□ 0.75
GNE-202ENST00000396594 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.75
GNE-202ENST00000396594 TCERG1O14776 1098 aaKnown RBP19.76■□□□□ 0.75
GNE-202ENST00000396594 KIAA1211Q6ZU35 1233 aa19.75■□□□□ 0.75
GNE-202ENST00000396594 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
GNE-202ENST00000396594 CCDC34Q96HJ3 373 aa19.75■□□□□ 0.75
GNE-202ENST00000396594 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.75
GNE-202ENST00000396594 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
GNE-202ENST00000396594 MYBBP1AQ9BQG0 1328 aaKnown RBP19.73■□□□□ 0.75
GNE-202ENST00000396594 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
GNE-202ENST00000396594 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.75
GNE-202ENST00000396594 GOLGA6L4A6NEF3 574 aa19.72■□□□□ 0.75
GNE-202ENST00000396594 AAMPQ13685 434 aa19.72■□□□□ 0.75
GNE-202ENST00000396594 IRX6P78412 446 aaPredicted RBP19.71■□□□□ 0.75
GNE-202ENST00000396594 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
GNE-202ENST00000396594 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
GNE-202ENST00000396594 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
GNE-202ENST00000396594 CSB-PGBD3P0DP91 1061 aa19.7■□□□□ 0.74
GNE-202ENST00000396594 CSPP1Q1MSJ5 1256 aa19.69■□□□□ 0.74
GNE-202ENST00000396594 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
GNE-202ENST00000396594 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
GNE-202ENST00000396594 STK26Q9P289 416 aa19.68■□□□□ 0.74
GNE-202ENST00000396594 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
GNE-202ENST00000396594 NBR1Q14596 966 aa19.68■□□□□ 0.74
GNE-202ENST00000396594 WWC1Q8IX03 1113 aa19.67■□□□□ 0.74
GNE-202ENST00000396594 NGDNQ8NEJ9 315 aaKnown RBP19.66■□□□□ 0.74
GNE-202ENST00000396594 GBP4Q96PP9 640 aa19.66■□□□□ 0.74
GNE-202ENST00000396594 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms