RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 FANCAO15360 1455 aa32.98■■■□□ 2.87
FXN-202ENST00000396364 EFCAB2Q5VUJ9 269 aa32.97■■■□□ 2.87
FXN-202ENST00000396364 NEO1Q92859 1461 aa32.97■■■□□ 2.87
FXN-202ENST00000396364 GPATCH8Q9UKJ3 1502 aaKnown RBP32.96■■■□□ 2.87
FXN-202ENST00000396364 CDC42BPBQ9Y5S2 1711 aa32.95■■■□□ 2.87
FXN-202ENST00000396364 CFDP1Q9UEE9 299 aaPredicted RBP32.92■■■□□ 2.86
FXN-202ENST00000396364 MYOM3Q5VTT5 1437 aa32.88■■■□□ 2.85
FXN-202ENST00000396364 AKNAQ7Z591 1439 aa32.85■■■□□ 2.85
FXN-202ENST00000396364 PPARGC1BQ86YN6 1023 aaKnown RBP32.84■■■□□ 2.85
FXN-202ENST00000396364 MIA2Q96PC5 1412 aa32.84■■■□□ 2.85
FXN-202ENST00000396364 PLEKHH2Q8IVE3 1493 aa32.82■■■□□ 2.84
FXN-202ENST00000396364 ZNF777Q9ULD5 760 aaPredicted RBP32.82■■■□□ 2.84
FXN-202ENST00000396364 ADGRL1O94910 1474 aa32.81■■■□□ 2.84
FXN-202ENST00000396364 KDM6BO15054 1643 aa32.81■■■□□ 2.84
FXN-202ENST00000396364 SAMD9LQ8IVG5 1584 aa32.75■■■□□ 2.83
FXN-202ENST00000396364 ABCC1P33527 1531 aa32.74■■■□□ 2.83
FXN-202ENST00000396364 DENND4BO75064 1496 aaPredicted RBP32.74■■■□□ 2.83
FXN-202ENST00000396364 FGD6Q6ZV73 1430 aa32.73■■■□□ 2.83
FXN-202ENST00000396364 SCAPERQ9BY12 1400 aa32.73■■■□□ 2.83
FXN-202ENST00000396364 KIAA1107Q9UPP5 1409 aa32.71■■■□□ 2.83
FXN-202ENST00000396364 CAMSAP2Q08AD1 1489 aa32.71■■■□□ 2.83
FXN-202ENST00000396364 PTPN23Q9H3S7 1636 aa32.69■■■□□ 2.82
FXN-202ENST00000396364 SYCP2Q9BX26 1530 aa32.67■■■□□ 2.82
FXN-202ENST00000396364 ZNF518AQ6AHZ1 1483 aa32.66■■■□□ 2.82
FXN-202ENST00000396364 RSPH4AQ5TD94 716 aa32.65■■■□□ 2.82
FXN-202ENST00000396364 POGZQ7Z3K3 1410 aa32.64■■■□□ 2.82
FXN-202ENST00000396364 RICTORQ6R327 1708 aa32.63■■■□□ 2.81
FXN-202ENST00000396364 TCOF1Q13428 1488 aaKnown RBP32.62■■■□□ 2.81
FXN-202ENST00000396364 ZNF644Q9H582 1327 aaPredicted RBP32.62■■■□□ 2.81
FXN-202ENST00000396364 COL17A1Q9UMD9 1497 aaPredicted RBP32.61■■■□□ 2.81
FXN-202ENST00000396364 RAPGEF3O95398 923 aa32.59■■■□□ 2.81
FXN-202ENST00000396364 HNRNPMP52272 730 aaKnown RBP eCLIP32.59■■■□□ 2.81
FXN-202ENST00000396364 ARHGEF5Q12774 1597 aa32.58■■■□□ 2.81
FXN-202ENST00000396364 ARHGEF12Q9NZN5 1544 aa32.57■■■□□ 2.8
FXN-202ENST00000396364 FAM50AQ14320 339 aaKnown RBP32.57■■■□□ 2.8
FXN-202ENST00000396364 CCDC141Q6ZP82 1450 aa32.55■■■□□ 2.8
FXN-202ENST00000396364 MBD5Q9P267 1494 aa32.54■■■□□ 2.8
FXN-202ENST00000396364 FRMPD1Q5SYB0 1578 aa32.54■■■□□ 2.8
FXN-202ENST00000396364 TRAPPC8Q9Y2L5 1435 aa32.54■■■□□ 2.8
FXN-202ENST00000396364 ZMYM4Q5VZL5 1548 aa32.54■■■□□ 2.8
FXN-202ENST00000396364 KDM5CP41229 1560 aa32.53■■■□□ 2.8
FXN-202ENST00000396364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.53■■■□□ 2.8
FXN-202ENST00000396364 RRBP1Q9P2E9 1410 aaKnown RBP32.52■■■□□ 2.8
FXN-202ENST00000396364 MAGI2Q86UL8 1455 aa32.52■■■□□ 2.8
FXN-202ENST00000396364 TSPY4P0CV99 314 aa32.51■■■□□ 2.79
FXN-202ENST00000396364 TSPY10P0CW01 314 aa32.51■■■□□ 2.79
FXN-202ENST00000396364 AFAP1Q8N556 730 aa32.51■■■□□ 2.79
FXN-202ENST00000396364 MYT1LQ9UL68 1186 aa32.51■■■□□ 2.79
FXN-202ENST00000396364 HECW2Q9P2P5 1572 aa32.49■■■□□ 2.79
FXN-202ENST00000396364 SPAG9O60271 1321 aaKnown RBP32.48■■■□□ 2.79
FXN-202ENST00000396364 DNMT1P26358 1616 aaKnown RBP32.47■■■□□ 2.79
FXN-202ENST00000396364 MLH3Q9UHC1 1453 aa32.46■■■□□ 2.79
FXN-202ENST00000396364 ZFYVE16Q7Z3T8 1539 aa32.42■■■□□ 2.78
FXN-202ENST00000396364 CROCC2H7BZ55 1655 aa32.42■■■□□ 2.78
FXN-202ENST00000396364 DAPK1P53355 1430 aa32.42■■■□□ 2.78
FXN-202ENST00000396364 RTEL1-TNFRSF6BF6WH68 1400 aa32.41■■■□□ 2.78
FXN-202ENST00000396364 SHANK2Q9UPX8 1470 aa32.41■■■□□ 2.78
FXN-202ENST00000396364 ATP7AQ04656 1500 aa32.4■■■□□ 2.78
FXN-202ENST00000396364 INO80Q9ULG1 1556 aaPredicted RBP32.39■■■□□ 2.78
FXN-202ENST00000396364 MAST1Q9Y2H9 1570 aa32.39■■■□□ 2.78
FXN-202ENST00000396364 ABCC5O15440 1437 aa32.38■■■□□ 2.77
FXN-202ENST00000396364 ARHGEF40Q8TER5 1519 aa32.37■■■□□ 2.77
FXN-202ENST00000396364 C9orf84Q5VXU9 1444 aa32.36■■■□□ 2.77
FXN-202ENST00000396364 KIDINS220Q9ULH0 1771 aa32.36■■■□□ 2.77
FXN-202ENST00000396364 YEATS2Q9ULM3 1422 aa32.29■■■□□ 2.76
FXN-202ENST00000396364 ADGBQ8N7X0 1667 aa32.29■■■□□ 2.76
FXN-202ENST00000396364 ABCA6Q8N139 1617 aa32.29■■■□□ 2.76
FXN-202ENST00000396364 ATP10AO60312 1499 aa32.29■■■□□ 2.76
FXN-202ENST00000396364 DIP2CQ9Y2E4 1556 aa32.28■■■□□ 2.76
FXN-202ENST00000396364 ITGAEP38570 1179 aa32.28■■■□□ 2.76
FXN-202ENST00000396364 PLXNC1O60486 1568 aa32.28■■■□□ 2.76
FXN-202ENST00000396364 ANKRD30AQ9BXX3 1397 aa32.27■■■□□ 2.76
FXN-202ENST00000396364 REREQ9P2R6 1566 aa32.23■■■□□ 2.75
FXN-202ENST00000396364 CHIC2Q9UKJ5 165 aa32.22■■■□□ 2.75
FXN-202ENST00000396364 ADGRL2O95490 1459 aa32.22■■■□□ 2.75
FXN-202ENST00000396364 ROCK1Q13464 1354 aa32.19■■■□□ 2.74
FXN-202ENST00000396364 A2MP01023 1474 aa32.19■■■□□ 2.74
FXN-202ENST00000396364 NCOA1Q15788 1441 aa32.17■■■□□ 2.74
FXN-202ENST00000396364 KIF15Q9NS87 1388 aa32.16■■■□□ 2.74
FXN-202ENST00000396364 DUOX2Q9NRD8 1548 aa32.16■■■□□ 2.74
FXN-202ENST00000396364 PTPRKQ15262 1439 aa32.15■■■□□ 2.74
FXN-202ENST00000396364 RRP7BPQ9NSQ0 103 aa32.14■■■□□ 2.74
FXN-202ENST00000396364 ARID4BQ4LE39 1312 aaPredicted RBP32.14■■■□□ 2.74
FXN-202ENST00000396364 DHX29Q7Z478 1369 aaKnown RBP32.14■■■□□ 2.74
FXN-202ENST00000396364 AGLP35573 1532 aa32.1■■■□□ 2.73
FXN-202ENST00000396364 ERBINQ96RT1 1412 aa32.08■■■□□ 2.73
FXN-202ENST00000396364 EIF2AK4Q9P2K8 1649 aaKnown RBP32.07■■■□□ 2.72
FXN-202ENST00000396364 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
FXN-202ENST00000396364 BCORL1Q5H9F3 1711 aa32.01■■■□□ 2.72
FXN-202ENST00000396364 ANKRD50Q9ULJ7 1429 aa32■■■□□ 2.71
FXN-202ENST00000396364 GCC2Q8IWJ2 1684 aa31.99■■■□□ 2.71
FXN-202ENST00000396364 SIGLEC1Q9BZZ2 1709 aa31.98■■■□□ 2.71
FXN-202ENST00000396364 KIF3BO15066 747 aa31.98■■■□□ 2.71
FXN-202ENST00000396364 HFM1A2PYH4 1435 aa31.98■■■□□ 2.71
FXN-202ENST00000396364 NAIPQ13075 1403 aa31.93■■■□□ 2.7
FXN-202ENST00000396364 MLECQ14165 292 aa31.92■■■□□ 2.7
FXN-202ENST00000396364 ESF1Q9H501 851 aaKnown RBP31.92■■■□□ 2.7
FXN-202ENST00000396364 RNF17Q9BXT8 1623 aaKnown RBP31.91■■■□□ 2.7
FXN-202ENST00000396364 PPP6R1Q9UPN7 881 aa31.91■■■□□ 2.7
FXN-202ENST00000396364 GGT6Q6P531 493 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms