RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 FGD6Q6ZV73 1430 aa11.31□□□□□ -0.6
LDHA-204ENST00000396222 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
LDHA-204ENST00000396222 MIA2Q96PC5 1412 aa11.3□□□□□ -0.6
LDHA-204ENST00000396222 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
LDHA-204ENST00000396222 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
LDHA-204ENST00000396222 ABCC2Q92887 1545 aa11.28□□□□□ -0.6
LDHA-204ENST00000396222 ARID3CA6NKF2 412 aa11.28□□□□□ -0.6
LDHA-204ENST00000396222 MAGI3Q5TCQ9 1506 aa11.27□□□□□ -0.6
LDHA-204ENST00000396222 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
LDHA-204ENST00000396222 UHRF1BP1LA0JNW5 1464 aa11.27□□□□□ -0.61
LDHA-204ENST00000396222 ATP10BO94823 1461 aa11.27□□□□□ -0.61
LDHA-204ENST00000396222 KIF14Q15058 1648 aa11.25□□□□□ -0.61
LDHA-204ENST00000396222 ADCY10Q96PN6 1610 aa11.25□□□□□ -0.61
LDHA-204ENST00000396222 ITSN2Q9NZM3 1697 aa11.24□□□□□ -0.61
LDHA-204ENST00000396222 ITGAEP38570 1179 aa11.23□□□□□ -0.61
LDHA-204ENST00000396222 PTPN23Q9H3S7 1636 aa11.23□□□□□ -0.61
LDHA-204ENST00000396222 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
LDHA-204ENST00000396222 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
LDHA-204ENST00000396222 TCOF1Q13428 1488 aaKnown RBP11.23□□□□□ -0.61
LDHA-204ENST00000396222 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
LDHA-204ENST00000396222 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
LDHA-204ENST00000396222 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.62
LDHA-204ENST00000396222 CFDP1Q9UEE9 299 aaPredicted RBP11.21□□□□□ -0.62
LDHA-204ENST00000396222 CLSPNQ9HAW4 1339 aa11.2□□□□□ -0.62
LDHA-204ENST00000396222 KDM5BQ9UGL1 1544 aa11.2□□□□□ -0.62
LDHA-204ENST00000396222 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
LDHA-204ENST00000396222 SETD5Q9C0A6 1442 aa11.19□□□□□ -0.62
LDHA-204ENST00000396222 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
LDHA-204ENST00000396222 GPATCH8Q9UKJ3 1502 aaKnown RBP11.16□□□□□ -0.62
LDHA-204ENST00000396222 ZCCHC11Q5TAX3 1644 aaKnown RBP11.16□□□□□ -0.62
LDHA-204ENST00000396222 AKNAQ7Z591 1439 aa11.15□□□□□ -0.62
LDHA-204ENST00000396222 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
LDHA-204ENST00000396222 ABCC10Q5T3U5 1492 aa11.15□□□□□ -0.63
LDHA-204ENST00000396222 HFM1A2PYH4 1435 aa11.14□□□□□ -0.63
LDHA-204ENST00000396222 RAB3GAP2Q9H2M9 1393 aa11.14□□□□□ -0.63
LDHA-204ENST00000396222 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
LDHA-204ENST00000396222 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
LDHA-204ENST00000396222 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
LDHA-204ENST00000396222 ROCK1Q13464 1354 aa11.12□□□□□ -0.63
LDHA-204ENST00000396222 DNMT1P26358 1616 aaKnown RBP11.12□□□□□ -0.63
LDHA-204ENST00000396222 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
LDHA-204ENST00000396222 DAPK1P53355 1430 aa11.12□□□□□ -0.63
LDHA-204ENST00000396222 PLEKHH2Q8IVE3 1493 aa11.11□□□□□ -0.63
LDHA-204ENST00000396222 WDR7Q9Y4E6 1490 aa11.11□□□□□ -0.63
LDHA-204ENST00000396222 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
LDHA-204ENST00000396222 PREX2Q70Z35 1606 aa11.1□□□□□ -0.63
LDHA-204ENST00000396222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.1□□□□□ -0.631e-17■■□□□ 13.5
LDHA-204ENST00000396222 TSPY4P0CV99 314 aa11.1□□□□□ -0.63
LDHA-204ENST00000396222 TSPY10P0CW01 314 aa11.1□□□□□ -0.63
LDHA-204ENST00000396222 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
LDHA-204ENST00000396222 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
LDHA-204ENST00000396222 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
LDHA-204ENST00000396222 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
LDHA-204ENST00000396222 EFCAB2Q5VUJ9 269 aa11.08□□□□□ -0.64
LDHA-204ENST00000396222 ARAP3Q8WWN8 1544 aa11.08□□□□□ -0.64
LDHA-204ENST00000396222 ABCC5O15440 1437 aa11.08□□□□□ -0.64
LDHA-204ENST00000396222 NAIPQ13075 1403 aa11.08□□□□□ -0.64
LDHA-204ENST00000396222 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
LDHA-204ENST00000396222 ANKRD30AQ9BXX3 1397 aa11.08□□□□□ -0.64
LDHA-204ENST00000396222 PLCH2O75038 1416 aa11.07□□□□□ -0.64
LDHA-204ENST00000396222 PTPRKQ15262 1439 aa11.07□□□□□ -0.64
LDHA-204ENST00000396222 GCC2Q8IWJ2 1684 aa11.07□□□□□ -0.64
LDHA-204ENST00000396222 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
LDHA-204ENST00000396222 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
LDHA-204ENST00000396222 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
LDHA-204ENST00000396222 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
LDHA-204ENST00000396222 KIAA1107Q9UPP5 1409 aa11.06□□□□□ -0.64
LDHA-204ENST00000396222 TTC37Q6PGP7 1564 aa11.06□□□□□ -0.64
LDHA-204ENST00000396222 CDC42BPBQ9Y5S2 1711 aa11.05□□□□□ -0.64
LDHA-204ENST00000396222 ADGRL2O95490 1459 aa11.05□□□□□ -0.64
LDHA-204ENST00000396222 CCDC141Q6ZP82 1450 aa11.05□□□□□ -0.64
LDHA-204ENST00000396222 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
LDHA-204ENST00000396222 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
LDHA-204ENST00000396222 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
LDHA-204ENST00000396222 RRP7BPQ9NSQ0 103 aa11.04□□□□□ -0.64
LDHA-204ENST00000396222 ABCA9Q8IUA7 1624 aa11.03□□□□□ -0.64
LDHA-204ENST00000396222 NCOA1Q15788 1441 aa11.02□□□□□ -0.64
LDHA-204ENST00000396222 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.64
LDHA-204ENST00000396222 SAMD9LQ8IVG5 1584 aa11.02□□□□□ -0.65
LDHA-204ENST00000396222 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.65
LDHA-204ENST00000396222 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.65
LDHA-204ENST00000396222 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.65
LDHA-204ENST00000396222 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
LDHA-204ENST00000396222 MBD5Q9P267 1494 aa11.01□□□□□ -0.65
LDHA-204ENST00000396222 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
LDHA-204ENST00000396222 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
LDHA-204ENST00000396222 ARXQ96QS3 562 aa11□□□□□ -0.65
LDHA-204ENST00000396222 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
LDHA-204ENST00000396222 TRIM52Q96A61 297 aa11□□□□□ -0.65
LDHA-204ENST00000396222 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
LDHA-204ENST00000396222 MAPKBP1O60336 1514 aa11□□□□□ -0.65
LDHA-204ENST00000396222 CFAP74Q9C0B2 1584 aa11□□□□□ -0.65
LDHA-204ENST00000396222 FANCAO15360 1455 aa10.99□□□□□ -0.65
LDHA-204ENST00000396222 SYCP2Q9BX26 1530 aa10.99□□□□□ -0.65
LDHA-204ENST00000396222 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
LDHA-204ENST00000396222 ABCC1P33527 1531 aa10.97□□□□□ -0.65
LDHA-204ENST00000396222 ANKRD50Q9ULJ7 1429 aa10.97□□□□□ -0.65
LDHA-204ENST00000396222 CD109Q6YHK3 1445 aa10.96□□□□□ -0.65
LDHA-204ENST00000396222 KIF15Q9NS87 1388 aa10.96□□□□□ -0.65
LDHA-204ENST00000396222 RTEL1-TNFRSF6BF6WH68 1400 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms