RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CD109Q6YHK3 1445 aa13.21□□□□□ -0.29
RAE1-202ENST00000395840 MAGI3Q5TCQ9 1506 aa13.21□□□□□ -0.3
RAE1-202ENST00000395840 MTUS2Q5JR59 1369 aa13.21□□□□□ -0.3
RAE1-202ENST00000395840 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.3
RAE1-202ENST00000395840 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
RAE1-202ENST00000395840 EHBP1L1Q8N3D4 1523 aa13.2□□□□□ -0.3
RAE1-202ENST00000395840 CLSPNQ9HAW4 1339 aa13.18□□□□□ -0.3
RAE1-202ENST00000395840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAE1-202ENST00000395840 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
RAE1-202ENST00000395840 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
RAE1-202ENST00000395840 NEO1Q92859 1461 aa13.15□□□□□ -0.3
RAE1-202ENST00000395840 LRRC9Q6ZRR7 1453 aa13.15□□□□□ -0.31
RAE1-202ENST00000395840 PLCH2O75038 1416 aa13.14□□□□□ -0.31
RAE1-202ENST00000395840 MYO5CQ9NQX4 1742 aa13.14□□□□□ -0.31
RAE1-202ENST00000395840 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
RAE1-202ENST00000395840 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
RAE1-202ENST00000395840 PPRC1Q5VV67 1664 aaKnown RBP13.13□□□□□ -0.31
RAE1-202ENST00000395840 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
RAE1-202ENST00000395840 EFCAB2Q5VUJ9 269 aa13.12□□□□□ -0.31
RAE1-202ENST00000395840 CCNB3Q8WWL7 1395 aa13.11□□□□□ -0.31
RAE1-202ENST00000395840 ITSN2Q9NZM3 1697 aa13.1□□□□□ -0.31
RAE1-202ENST00000395840 FANCAO15360 1455 aa13.1□□□□□ -0.31
RAE1-202ENST00000395840 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
RAE1-202ENST00000395840 ARHGAP5Q13017 1502 aa13.08□□□□□ -0.32
RAE1-202ENST00000395840 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
RAE1-202ENST00000395840 KDM6BO15054 1643 aa13.08□□□□□ -0.32
RAE1-202ENST00000395840 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
RAE1-202ENST00000395840 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
RAE1-202ENST00000395840 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
RAE1-202ENST00000395840 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
RAE1-202ENST00000395840 CFDP1Q9UEE9 299 aaPredicted RBP13.05□□□□□ -0.32
RAE1-202ENST00000395840 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
RAE1-202ENST00000395840 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
RAE1-202ENST00000395840 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
RAE1-202ENST00000395840 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
RAE1-202ENST00000395840 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
RAE1-202ENST00000395840 ADGRL1O94910 1474 aa13.03□□□□□ -0.32
RAE1-202ENST00000395840 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
RAE1-202ENST00000395840 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
RAE1-202ENST00000395840 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
RAE1-202ENST00000395840 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
RAE1-202ENST00000395840 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
RAE1-202ENST00000395840 ABCC1P33527 1531 aa12.99□□□□□ -0.33
RAE1-202ENST00000395840 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
RAE1-202ENST00000395840 MAGI2Q86UL8 1455 aa12.98□□□□□ -0.33
RAE1-202ENST00000395840 POGZQ7Z3K3 1410 aa12.98□□□□□ -0.33
RAE1-202ENST00000395840 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
RAE1-202ENST00000395840 SAMD9LQ8IVG5 1584 aa12.97□□□□□ -0.33
RAE1-202ENST00000395840 ZMYM4Q5VZL5 1548 aa12.97□□□□□ -0.33
RAE1-202ENST00000395840 COL17A1Q9UMD9 1497 aaPredicted RBP12.96□□□□□ -0.33
RAE1-202ENST00000395840 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
RAE1-202ENST00000395840 BCANQ96GW7 911 aa12.95□□□□□ -0.34
RAE1-202ENST00000395840 CAMSAP2Q08AD1 1489 aa12.94□□□□□ -0.34
RAE1-202ENST00000395840 MSH5O43196 834 aa12.94□□□□□ -0.34
RAE1-202ENST00000395840 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
RAE1-202ENST00000395840 KDM5CP41229 1560 aa12.93□□□□□ -0.34
RAE1-202ENST00000395840 ARHGEF5Q12774 1597 aa12.93□□□□□ -0.34
RAE1-202ENST00000395840 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
RAE1-202ENST00000395840 FRMPD1Q5SYB0 1578 aa12.93□□□□□ -0.34
RAE1-202ENST00000395840 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
RAE1-202ENST00000395840 TCOF1Q13428 1488 aaKnown RBP12.92□□□□□ -0.34
RAE1-202ENST00000395840 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
RAE1-202ENST00000395840 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
RAE1-202ENST00000395840 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
RAE1-202ENST00000395840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAE1-202ENST00000395840 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
RAE1-202ENST00000395840 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAE1-202ENST00000395840 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
RAE1-202ENST00000395840 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
RAE1-202ENST00000395840 ZFYVE16Q7Z3T8 1539 aa12.9□□□□□ -0.34
RAE1-202ENST00000395840 TSPY4P0CV99 314 aa12.9□□□□□ -0.34
RAE1-202ENST00000395840 TSPY10P0CW01 314 aa12.9□□□□□ -0.34
RAE1-202ENST00000395840 RTEL1-TNFRSF6BF6WH68 1400 aa12.9□□□□□ -0.34
RAE1-202ENST00000395840 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.35
RAE1-202ENST00000395840 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
RAE1-202ENST00000395840 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
RAE1-202ENST00000395840 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
RAE1-202ENST00000395840 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
RAE1-202ENST00000395840 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
RAE1-202ENST00000395840 ATP10AO60312 1499 aa12.86□□□□□ -0.35
RAE1-202ENST00000395840 SHANK2Q9UPX8 1470 aa12.86□□□□□ -0.35
RAE1-202ENST00000395840 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
RAE1-202ENST00000395840 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
RAE1-202ENST00000395840 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
RAE1-202ENST00000395840 DEKP35659 375 aaKnown RBP12.85□□□□□ -0.35
RAE1-202ENST00000395840 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
RAE1-202ENST00000395840 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
RAE1-202ENST00000395840 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
RAE1-202ENST00000395840 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
RAE1-202ENST00000395840 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
RAE1-202ENST00000395840 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
RAE1-202ENST00000395840 AEBP2Q6ZN18 517 aaPredicted RBP12.83□□□□□ -0.36
RAE1-202ENST00000395840 KIDINS220Q9ULH0 1771 aa12.83□□□□□ -0.36
RAE1-202ENST00000395840 DAPK1P53355 1430 aa12.83□□□□□ -0.36
RAE1-202ENST00000395840 FKBP8Q14318 412 aa12.83□□□□□ -0.36
RAE1-202ENST00000395840 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
RAE1-202ENST00000395840 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
RAE1-202ENST00000395840 ABCC5O15440 1437 aa12.82□□□□□ -0.36
RAE1-202ENST00000395840 DIP2CQ9Y2E4 1556 aa12.81□□□□□ -0.36
RAE1-202ENST00000395840 YEATS2Q9ULM3 1422 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms