RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 NUP155O75694 1391 aa19.69■□□□□ 0.74
SREBF1-205ENST00000395757 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
SREBF1-205ENST00000395757 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
SREBF1-205ENST00000395757 EPRSP07814 1512 aaKnown RBP19.64■□□□□ 0.73
SREBF1-205ENST00000395757 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
SREBF1-205ENST00000395757 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
SREBF1-205ENST00000395757 MAP3K1Q13233 1512 aa19.62■□□□□ 0.73
SREBF1-205ENST00000395757 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-205ENST00000395757 PLB1Q6P1J6 1458 aa19.6■□□□□ 0.73
SREBF1-205ENST00000395757 CUL7Q14999 1698 aa19.59■□□□□ 0.73
SREBF1-205ENST00000395757 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
SREBF1-205ENST00000395757 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
SREBF1-205ENST00000395757 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.73
SREBF1-205ENST00000395757 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
SREBF1-205ENST00000395757 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
SREBF1-205ENST00000395757 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
SREBF1-205ENST00000395757 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
SREBF1-205ENST00000395757 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
SREBF1-205ENST00000395757 CARMIL2Q6F5E8 1435 aa19.55■□□□□ 0.72
SREBF1-205ENST00000395757 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
SREBF1-205ENST00000395757 IQGAP2Q13576 1575 aa19.54■□□□□ 0.72
SREBF1-205ENST00000395757 EHBP1L1Q8N3D4 1523 aa19.54■□□□□ 0.72
SREBF1-205ENST00000395757 MAGI3Q5TCQ9 1506 aa19.54■□□□□ 0.72
SREBF1-205ENST00000395757 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
SREBF1-205ENST00000395757 ANKRD30AQ9BXX3 1397 aa19.51■□□□□ 0.71
SREBF1-205ENST00000395757 CTTNBP2Q8WZ74 1663 aa19.51■□□□□ 0.71
SREBF1-205ENST00000395757 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
SREBF1-205ENST00000395757 CFAP43Q8NDM7 1665 aa19.5■□□□□ 0.71
SREBF1-205ENST00000395757 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
SREBF1-205ENST00000395757 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
SREBF1-205ENST00000395757 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
SREBF1-205ENST00000395757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.49■□□□□ 0.713e-17■■■■■ 32.6
SREBF1-205ENST00000395757 DAPK1P53355 1430 aa19.49■□□□□ 0.71
SREBF1-205ENST00000395757 ABCC5O15440 1437 aa19.48■□□□□ 0.71
SREBF1-205ENST00000395757 USP47Q96K76 1375 aa19.46■□□□□ 0.71
SREBF1-205ENST00000395757 PTPRGP23470 1445 aa19.45■□□□□ 0.7
SREBF1-205ENST00000395757 ANO8Q9HCE9 1232 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-205ENST00000395757 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
SREBF1-205ENST00000395757 NBPF1Q3BBV0 1214 aa19.43■□□□□ 0.7
SREBF1-205ENST00000395757 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
SREBF1-205ENST00000395757 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
SREBF1-205ENST00000395757 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
SREBF1-205ENST00000395757 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
SREBF1-205ENST00000395757 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
SREBF1-205ENST00000395757 ANKRD30BQ9BXX2 1392 aa19.4■□□□□ 0.7
SREBF1-205ENST00000395757 KDM6BO15054 1643 aa19.4■□□□□ 0.7
SREBF1-205ENST00000395757 GRIN2AQ12879 1464 aa19.39■□□□□ 0.7
SREBF1-205ENST00000395757 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
SREBF1-205ENST00000395757 KIF15Q9NS87 1388 aa19.39■□□□□ 0.69
SREBF1-205ENST00000395757 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-205ENST00000395757 NUP153P49790 1475 aaKnown RBP19.38■□□□□ 0.69
SREBF1-205ENST00000395757 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
SREBF1-205ENST00000395757 MIA2Q96PC5 1412 aa19.38■□□□□ 0.69
SREBF1-205ENST00000395757 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-205ENST00000395757 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
SREBF1-205ENST00000395757 PPP4R2Q9NY27 417 aa19.36■□□□□ 0.69
SREBF1-205ENST00000395757 NBR1Q14596 966 aa19.34■□□□□ 0.69
SREBF1-205ENST00000395757 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
SREBF1-205ENST00000395757 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-205ENST00000395757 SAMD9Q5K651 1589 aa19.31■□□□□ 0.68
SREBF1-205ENST00000395757 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
SREBF1-205ENST00000395757 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
SREBF1-205ENST00000395757 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
SREBF1-205ENST00000395757 NCOA1Q15788 1441 aa19.3■□□□□ 0.68
SREBF1-205ENST00000395757 KIF3BO15066 747 aa19.29■□□□□ 0.68
SREBF1-205ENST00000395757 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
SREBF1-205ENST00000395757 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
SREBF1-205ENST00000395757 NEUROD2Q15784 382 aa19.28■□□□□ 0.68
SREBF1-205ENST00000395757 C9orf84Q5VXU9 1444 aa19.28■□□□□ 0.68
SREBF1-205ENST00000395757 PLIN1O60240 522 aa19.28■□□□□ 0.68
SREBF1-205ENST00000395757 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
SREBF1-205ENST00000395757 GGT6Q6P531 493 aa19.27■□□□□ 0.68
SREBF1-205ENST00000395757 PANK3Q9H999 370 aa19.27■□□□□ 0.68
SREBF1-205ENST00000395757 WDR62O43379 1518 aa19.27■□□□□ 0.68
SREBF1-205ENST00000395757 GPATCH8Q9UKJ3 1502 aaKnown RBP19.26■□□□□ 0.67
SREBF1-205ENST00000395757 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
SREBF1-205ENST00000395757 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
SREBF1-205ENST00000395757 EFCAB2Q5VUJ9 269 aa19.25■□□□□ 0.67
SREBF1-205ENST00000395757 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
SREBF1-205ENST00000395757 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
SREBF1-205ENST00000395757 NPM1P06748 294 aaKnown RBP eCLIP19.24■□□□□ 0.67
SREBF1-205ENST00000395757 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
SREBF1-205ENST00000395757 CCDC144AA2RUR9 1427 aa19.24■□□□□ 0.67
SREBF1-205ENST00000395757 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
SREBF1-205ENST00000395757 ZBED9Q6R2W3 1325 aa19.22■□□□□ 0.67
SREBF1-205ENST00000395757 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
SREBF1-205ENST00000395757 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
SREBF1-205ENST00000395757 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
SREBF1-205ENST00000395757 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
SREBF1-205ENST00000395757 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
SREBF1-205ENST00000395757 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
SREBF1-205ENST00000395757 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
SREBF1-205ENST00000395757 TMF1P82094 1093 aa19.2■□□□□ 0.66
SREBF1-205ENST00000395757 ROCK1Q13464 1354 aa19.2■□□□□ 0.66
SREBF1-205ENST00000395757 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
SREBF1-205ENST00000395757 DENND4BO75064 1496 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-205ENST00000395757 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
SREBF1-205ENST00000395757 ATP10BO94823 1461 aa19.18■□□□□ 0.66
SREBF1-205ENST00000395757 RAPGEF6Q8TEU7 1601 aa19.17■□□□□ 0.66
SREBF1-205ENST00000395757 TCOF1Q13428 1488 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms