RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TROQ12816 1431 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-204ENST00000395756 TIMELESSQ9UNS1 1208 aa25.52■■□□□ 1.68
SREBF1-204ENST00000395756 PTPRGP23470 1445 aa25.5■■□□□ 1.67
SREBF1-204ENST00000395756 ABCC5O15440 1437 aa25.5■■□□□ 1.67
SREBF1-204ENST00000395756 DAPK1P53355 1430 aa25.49■■□□□ 1.67
SREBF1-204ENST00000395756 KDM6BO15054 1643 aa25.49■■□□□ 1.67
SREBF1-204ENST00000395756 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
SREBF1-204ENST00000395756 KCNH8Q96L42 1107 aa25.47■■□□□ 1.67
SREBF1-204ENST00000395756 ATP10BO94823 1461 aa25.43■■□□□ 1.66
SREBF1-204ENST00000395756 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
SREBF1-204ENST00000395756 HNRNPMP52272 730 aaKnown RBP eCLIP25.42■■□□□ 1.668e-8■■□□□ 12.4
SREBF1-204ENST00000395756 KIF14Q15058 1648 aa25.41■■□□□ 1.66
SREBF1-204ENST00000395756 L3MBTL2Q969R5 705 aa25.37■■□□□ 1.65
SREBF1-204ENST00000395756 CAMSAP2Q08AD1 1489 aa25.37■■□□□ 1.65
SREBF1-204ENST00000395756 DENND4BO75064 1496 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-204ENST00000395756 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
SREBF1-204ENST00000395756 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
SREBF1-204ENST00000395756 AKNAQ7Z591 1439 aa25.31■■□□□ 1.64
SREBF1-204ENST00000395756 ROCK1Q13464 1354 aa25.31■■□□□ 1.64
SREBF1-204ENST00000395756 ABCA8O94911 1581 aa25.29■■□□□ 1.64
SREBF1-204ENST00000395756 ZNF326Q5BKZ1 582 aaKnown RBP25.29■■□□□ 1.64
SREBF1-204ENST00000395756 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
SREBF1-204ENST00000395756 NCOA1Q15788 1441 aa25.28■■□□□ 1.64
SREBF1-204ENST00000395756 DNMT1P26358 1616 aaKnown RBP25.26■■□□□ 1.63
SREBF1-204ENST00000395756 PKD2Q13563 968 aa25.26■■□□□ 1.63
SREBF1-204ENST00000395756 CHD1O14646 1710 aa25.25■■□□□ 1.63
SREBF1-204ENST00000395756 ERCC6L2Q5T890 1561 aa25.25■■□□□ 1.63
SREBF1-204ENST00000395756 GCC2Q8IWJ2 1684 aa25.24■■□□□ 1.63
SREBF1-204ENST00000395756 ANKRD30AQ9BXX3 1397 aa25.24■■□□□ 1.63
SREBF1-204ENST00000395756 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
SREBF1-204ENST00000395756 ANKRD30BQ9BXX2 1392 aa25.2■■□□□ 1.63
SREBF1-204ENST00000395756 NBPF8Q3BBV2 869 aa25.19■■□□□ 1.62
SREBF1-204ENST00000395756 ANP32CO43423 234 aa25.18■■□□□ 1.62
SREBF1-204ENST00000395756 NUP155O75694 1391 aa25.18■■□□□ 1.62
SREBF1-204ENST00000395756 ABCC10Q5T3U5 1492 aa25.18■■□□□ 1.62
SREBF1-204ENST00000395756 ANKRD50Q9ULJ7 1429 aa25.17■■□□□ 1.62
SREBF1-204ENST00000395756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.17■■□□□ 1.623e-7■■□□□ 12.9
SREBF1-204ENST00000395756 EIF4G2P78344 907 aaKnown RBP eCLIP25.16■■□□□ 1.626e-6■■■■□ 25.1
SREBF1-204ENST00000395756 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
SREBF1-204ENST00000395756 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
SREBF1-204ENST00000395756 ITSN2Q9NZM3 1697 aa25.12■■□□□ 1.61
SREBF1-204ENST00000395756 CNGB1Q14028 1251 aaPredicted RBP25.11■■□□□ 1.61
SREBF1-204ENST00000395756 PRKCSHP14314 528 aaPredicted RBP25.1■■□□□ 1.61
SREBF1-204ENST00000395756 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
SREBF1-204ENST00000395756 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
SREBF1-204ENST00000395756 KDM2AQ9Y2K7 1162 aa25.1■■□□□ 1.61
SREBF1-204ENST00000395756 PZPP20742 1482 aa25.09■■□□□ 1.61
SREBF1-204ENST00000395756 ADCY10Q96PN6 1610 aa25.08■■□□□ 1.61
SREBF1-204ENST00000395756 WASHC2AQ641Q2 1341 aa25.08■■□□□ 1.6
SREBF1-204ENST00000395756 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
SREBF1-204ENST00000395756 C11orf95C9JLR9 678 aaPredicted RBP25.07■■□□□ 1.6
SREBF1-204ENST00000395756 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
SREBF1-204ENST00000395756 ARHGAP5Q13017 1502 aa25.02■■□□□ 1.6
SREBF1-204ENST00000395756 ADGRL2O95490 1459 aa25.01■■□□□ 1.59
SREBF1-204ENST00000395756 KIAA1107Q9UPP5 1409 aa25.01■■□□□ 1.59
SREBF1-204ENST00000395756 MBD5Q9P267 1494 aa25■■□□□ 1.59
SREBF1-204ENST00000395756 MYT1LQ9UL68 1186 aa24.98■■□□□ 1.59
SREBF1-204ENST00000395756 RGL3Q3MIN7 710 aa24.98■■□□□ 1.59
SREBF1-204ENST00000395756 ABCC2Q92887 1545 aa24.96■■□□□ 1.59
SREBF1-204ENST00000395756 DCAF11Q8TEB1 546 aa24.95■■□□□ 1.58
SREBF1-204ENST00000395756 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
SREBF1-204ENST00000395756 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
SREBF1-204ENST00000395756 EFCAB2Q5VUJ9 269 aa24.94■■□□□ 1.58
SREBF1-204ENST00000395756 CCDC141Q6ZP82 1450 aa24.94■■□□□ 1.58
SREBF1-204ENST00000395756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.94■■□□□ 1.583e-8■□□□□ 10.1
SREBF1-204ENST00000395756 TTC37Q6PGP7 1564 aa24.94■■□□□ 1.58
SREBF1-204ENST00000395756 SAMD9LQ8IVG5 1584 aa24.94■■□□□ 1.58
SREBF1-204ENST00000395756 SYCP2Q9BX26 1530 aa24.94■■□□□ 1.58
SREBF1-204ENST00000395756 TEX14Q8IWB6 1497 aa24.93■■□□□ 1.58
SREBF1-204ENST00000395756 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
SREBF1-204ENST00000395756 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
SREBF1-204ENST00000395756 CROCC2H7BZ55 1655 aa24.89■■□□□ 1.58
SREBF1-204ENST00000395756 CDC42BPBQ9Y5S2 1711 aa24.89■■□□□ 1.57
SREBF1-204ENST00000395756 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
SREBF1-204ENST00000395756 CCER2I3L3R5 266 aa24.88■■□□□ 1.57
SREBF1-204ENST00000395756 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
SREBF1-204ENST00000395756 CARD11Q9BXL7 1154 aa24.85■■□□□ 1.57
SREBF1-204ENST00000395756 KIF7Q2M1P5 1343 aa24.84■■□□□ 1.57
SREBF1-204ENST00000395756 CCDC7Q96M83 1385 aa24.83■■□□□ 1.57
SREBF1-204ENST00000395756 PREX2Q70Z35 1606 aa24.83■■□□□ 1.56
SREBF1-204ENST00000395756 ARHGEF12Q9NZN5 1544 aa24.82■■□□□ 1.56
SREBF1-204ENST00000395756 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
SREBF1-204ENST00000395756 PLEKHH2Q8IVE3 1493 aa24.82■■□□□ 1.56
SREBF1-204ENST00000395756 PLCH2O75038 1416 aa24.8■■□□□ 1.56
SREBF1-204ENST00000395756 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
SREBF1-204ENST00000395756 ARHGEF5Q12774 1597 aa24.79■■□□□ 1.56
SREBF1-204ENST00000395756 TRAPPC8Q9Y2L5 1435 aa24.79■■□□□ 1.56
SREBF1-204ENST00000395756 USP47Q96K76 1375 aa24.78■■□□□ 1.56
SREBF1-204ENST00000395756 SPAG9O60271 1321 aaKnown RBP24.78■■□□□ 1.56
SREBF1-204ENST00000395756 ZCCHC11Q5TAX3 1644 aaKnown RBP24.78■■□□□ 1.56
SREBF1-204ENST00000395756 HNRNPUQ00839 825 aaKnown RBP eCLIP24.77■■□□□ 1.56
SREBF1-204ENST00000395756 BCANQ96GW7 911 aa24.76■■□□□ 1.55
SREBF1-204ENST00000395756 SUPT16HQ9Y5B9 1047 aaKnown RBP24.76■■□□□ 1.55
SREBF1-204ENST00000395756 FAM9BQ8IZU0 186 aa24.75■■□□□ 1.55
SREBF1-204ENST00000395756 ST20-MTHFSA0A0A6YYL1 179 aa24.74■■□□□ 1.55
SREBF1-204ENST00000395756 NPM1P06748 294 aaKnown RBP eCLIP24.74■■□□□ 1.55
SREBF1-204ENST00000395756 FAM135AQ9P2D6 1515 aa24.73■■□□□ 1.55
SREBF1-204ENST00000395756 SPATA31E1Q6ZUB1 1445 aa24.72■■□□□ 1.55
SREBF1-204ENST00000395756 CCDC144AA2RUR9 1427 aa24.72■■□□□ 1.55
SREBF1-204ENST00000395756 PRKRIP1Q9H875 184 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms