RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CTTNBP2Q8WZ74 1663 aa17.93■□□□□ 0.46
NFKB1-202ENST00000394820 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
NFKB1-202ENST00000394820 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
NFKB1-202ENST00000394820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
NFKB1-202ENST00000394820 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
NFKB1-202ENST00000394820 ARXQ96QS3 562 aa17.92■□□□□ 0.46
NFKB1-202ENST00000394820 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
NFKB1-202ENST00000394820 MSH5O43196 834 aa17.9■□□□□ 0.46
NFKB1-202ENST00000394820 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
NFKB1-202ENST00000394820 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
NFKB1-202ENST00000394820 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
NFKB1-202ENST00000394820 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
NFKB1-202ENST00000394820 PKD2Q13563 968 aa17.87■□□□□ 0.45
NFKB1-202ENST00000394820 MAGI3Q5TCQ9 1506 aa17.87■□□□□ 0.45
NFKB1-202ENST00000394820 CCDC184Q52MB2 194 aa17.87■□□□□ 0.45
NFKB1-202ENST00000394820 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
NFKB1-202ENST00000394820 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
NFKB1-202ENST00000394820 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
NFKB1-202ENST00000394820 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
NFKB1-202ENST00000394820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.85■□□□□ 0.45
NFKB1-202ENST00000394820 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
NFKB1-202ENST00000394820 RGL3Q3MIN7 710 aa17.85■□□□□ 0.45
NFKB1-202ENST00000394820 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
NFKB1-202ENST00000394820 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
NFKB1-202ENST00000394820 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
NFKB1-202ENST00000394820 WASHC2AQ641Q2 1341 aa17.84■□□□□ 0.45
NFKB1-202ENST00000394820 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
NFKB1-202ENST00000394820 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
NFKB1-202ENST00000394820 NOP58Q9Y2X3 529 aaKnown RBP17.84■□□□□ 0.45
NFKB1-202ENST00000394820 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
NFKB1-202ENST00000394820 PLB1Q6P1J6 1458 aa17.81■□□□□ 0.44
NFKB1-202ENST00000394820 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
NFKB1-202ENST00000394820 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
NFKB1-202ENST00000394820 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
NFKB1-202ENST00000394820 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
NFKB1-202ENST00000394820 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
NFKB1-202ENST00000394820 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.44
NFKB1-202ENST00000394820 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
NFKB1-202ENST00000394820 KIAA0586Q9BVV6 1533 aa17.75■□□□□ 0.43
NFKB1-202ENST00000394820 NUP155O75694 1391 aa17.75■□□□□ 0.43
NFKB1-202ENST00000394820 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
NFKB1-202ENST00000394820 PAK3O75914 559 aaPredicted RBP17.73■□□□□ 0.43
NFKB1-202ENST00000394820 DAPK1P53355 1430 aa17.73■□□□□ 0.43
NFKB1-202ENST00000394820 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
NFKB1-202ENST00000394820 ABCC5O15440 1437 aa17.72■□□□□ 0.43
NFKB1-202ENST00000394820 ADAMTS12P58397 1594 aa17.72■□□□□ 0.43
NFKB1-202ENST00000394820 CARD11Q9BXL7 1154 aa17.72■□□□□ 0.43
NFKB1-202ENST00000394820 NEFMP07197 916 aa17.71■□□□□ 0.43
NFKB1-202ENST00000394820 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
NFKB1-202ENST00000394820 KDM6BO15054 1643 aa17.7■□□□□ 0.42
NFKB1-202ENST00000394820 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
NFKB1-202ENST00000394820 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
NFKB1-202ENST00000394820 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
NFKB1-202ENST00000394820 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
NFKB1-202ENST00000394820 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
NFKB1-202ENST00000394820 ANKRD30AQ9BXX3 1397 aa17.66■□□□□ 0.42
NFKB1-202ENST00000394820 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
NFKB1-202ENST00000394820 WDR62O43379 1518 aa17.66■□□□□ 0.42
NFKB1-202ENST00000394820 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
NFKB1-202ENST00000394820 SLC4A3P48751 1232 aa17.65■□□□□ 0.42
NFKB1-202ENST00000394820 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
NFKB1-202ENST00000394820 ANKRD30BQ9BXX2 1392 aa17.64■□□□□ 0.41
NFKB1-202ENST00000394820 PTPRGP23470 1445 aa17.63■□□□□ 0.41
NFKB1-202ENST00000394820 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
NFKB1-202ENST00000394820 RGS3P49796 1198 aa17.62■□□□□ 0.41
NFKB1-202ENST00000394820 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
NFKB1-202ENST00000394820 PLIN1O60240 522 aa17.61■□□□□ 0.41
NFKB1-202ENST00000394820 ST20-MTHFSA0A0A6YYL1 179 aa17.6■□□□□ 0.41
NFKB1-202ENST00000394820 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
NFKB1-202ENST00000394820 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
NFKB1-202ENST00000394820 KIAA0556O60303 1618 aa17.59■□□□□ 0.41
NFKB1-202ENST00000394820 SKAP1Q86WV1 359 aa17.59■□□□□ 0.41
NFKB1-202ENST00000394820 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
NFKB1-202ENST00000394820 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
NFKB1-202ENST00000394820 CAMSAP2Q08AD1 1489 aa17.59■□□□□ 0.41
NFKB1-202ENST00000394820 SYNJ2O15056 1496 aa17.58■□□□□ 0.4
NFKB1-202ENST00000394820 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
NFKB1-202ENST00000394820 USP47Q96K76 1375 aa17.57■□□□□ 0.4
NFKB1-202ENST00000394820 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
NFKB1-202ENST00000394820 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
NFKB1-202ENST00000394820 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
NFKB1-202ENST00000394820 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
NFKB1-202ENST00000394820 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
NFKB1-202ENST00000394820 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
NFKB1-202ENST00000394820 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
NFKB1-202ENST00000394820 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
NFKB1-202ENST00000394820 CNTLNQ9NXG0 1405 aa17.54■□□□□ 0.4
NFKB1-202ENST00000394820 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
NFKB1-202ENST00000394820 EXOC6Q8TAG9 804 aa17.53■□□□□ 0.4
NFKB1-202ENST00000394820 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
NFKB1-202ENST00000394820 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
NFKB1-202ENST00000394820 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
NFKB1-202ENST00000394820 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
NFKB1-202ENST00000394820 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
NFKB1-202ENST00000394820 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
NFKB1-202ENST00000394820 NBPF1Q3BBV0 1214 aa17.49■□□□□ 0.39
NFKB1-202ENST00000394820 KIF14Q15058 1648 aa17.49■□□□□ 0.39
NFKB1-202ENST00000394820 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
NFKB1-202ENST00000394820 ATP10BO94823 1461 aa17.49■□□□□ 0.39
NFKB1-202ENST00000394820 KIAA1107Q9UPP5 1409 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms