RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 DDX10Q13206 875 aaKnown RBP21.1■□□□□ 0.97
SHTN1-204ENST00000392903 NEFLP07196 543 aa21.09■□□□□ 0.97
SHTN1-204ENST00000392903 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.96
SHTN1-204ENST00000392903 KDM6BO15054 1643 aa21.07■□□□□ 0.96
SHTN1-204ENST00000392903 CARMIL2Q6F5E8 1435 aa21.03■□□□□ 0.96
SHTN1-204ENST00000392903 NUP160Q12769 1436 aa21.03■□□□□ 0.96
SHTN1-204ENST00000392903 FOXD1Q16676 465 aa21.03■□□□□ 0.96
SHTN1-204ENST00000392903 GCC2Q8IWJ2 1684 aa21.02■□□□□ 0.96
SHTN1-204ENST00000392903 ZNF777Q9ULD5 760 aaPredicted RBP21.02■□□□□ 0.95
SHTN1-204ENST00000392903 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
SHTN1-204ENST00000392903 DAPK1P53355 1430 aa21.01■□□□□ 0.95
SHTN1-204ENST00000392903 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
SHTN1-204ENST00000392903 DENND4BO75064 1496 aaPredicted RBP20.99■□□□□ 0.95
SHTN1-204ENST00000392903 ABCC5O15440 1437 aa20.99■□□□□ 0.95
SHTN1-204ENST00000392903 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
SHTN1-204ENST00000392903 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
SHTN1-204ENST00000392903 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
SHTN1-204ENST00000392903 MSH5O43196 834 aa20.97■□□□□ 0.95
SHTN1-204ENST00000392903 FANCIQ9NVI1 1328 aa20.94■□□□□ 0.94
SHTN1-204ENST00000392903 KIF14Q15058 1648 aa20.94■□□□□ 0.94
SHTN1-204ENST00000392903 DNMT1P26358 1616 aaKnown RBP20.94■□□□□ 0.94
SHTN1-204ENST00000392903 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
SHTN1-204ENST00000392903 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
SHTN1-204ENST00000392903 GPATCH8Q9UKJ3 1502 aaKnown RBP20.91■□□□□ 0.94
SHTN1-204ENST00000392903 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
SHTN1-204ENST00000392903 KDM5BQ9UGL1 1544 aa20.89■□□□□ 0.94
SHTN1-204ENST00000392903 SLC4A1APQ9BWU0 796 aaKnown RBP20.88■□□□□ 0.93
SHTN1-204ENST00000392903 L3MBTL2Q969R5 705 aa20.86■□□□□ 0.93
SHTN1-204ENST00000392903 ATP10BO94823 1461 aa20.86■□□□□ 0.93
SHTN1-204ENST00000392903 ABCA8O94911 1581 aa20.84■□□□□ 0.93
SHTN1-204ENST00000392903 ANP32CO43423 234 aa20.84■□□□□ 0.93
SHTN1-204ENST00000392903 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
SHTN1-204ENST00000392903 PTPRGP23470 1445 aa20.82■□□□□ 0.92
SHTN1-204ENST00000392903 NCOA1Q15788 1441 aa20.82■□□□□ 0.92
SHTN1-204ENST00000392903 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
SHTN1-204ENST00000392903 ANKRD30BQ9BXX2 1392 aa20.8■□□□□ 0.92
SHTN1-204ENST00000392903 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
SHTN1-204ENST00000392903 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
SHTN1-204ENST00000392903 CHD1O14646 1710 aa20.77■□□□□ 0.92
SHTN1-204ENST00000392903 CDC42BPAQ5VT25 1732 aa20.76■□□□□ 0.91
SHTN1-204ENST00000392903 ERICH6Q7L0X2 663 aa20.75■□□□□ 0.91
SHTN1-204ENST00000392903 ABCC10Q5T3U5 1492 aa20.75■□□□□ 0.91
SHTN1-204ENST00000392903 HNRNPMP52272 730 aaKnown RBP eCLIP20.75■□□□□ 0.91
SHTN1-204ENST00000392903 ANKRD30AQ9BXX3 1397 aa20.74■□□□□ 0.91
SHTN1-204ENST00000392903 EIF4G2P78344 907 aaKnown RBP eCLIP20.74■□□□□ 0.91
SHTN1-204ENST00000392903 RPRD2Q5VT52 1461 aaKnown RBP20.73■□□□□ 0.91
SHTN1-204ENST00000392903 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
SHTN1-204ENST00000392903 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
SHTN1-204ENST00000392903 PZPP20742 1482 aa20.72■□□□□ 0.91
SHTN1-204ENST00000392903 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
SHTN1-204ENST00000392903 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
SHTN1-204ENST00000392903 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
SHTN1-204ENST00000392903 PKD2Q13563 968 aa20.7■□□□□ 0.91
SHTN1-204ENST00000392903 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.9
SHTN1-204ENST00000392903 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
SHTN1-204ENST00000392903 ANKRD50Q9ULJ7 1429 aa20.69■□□□□ 0.9
SHTN1-204ENST00000392903 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
SHTN1-204ENST00000392903 C9orf84Q5VXU9 1444 aa20.68■□□□□ 0.9
SHTN1-204ENST00000392903 TEX14Q8IWB6 1497 aa20.66■□□□□ 0.9
SHTN1-204ENST00000392903 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
SHTN1-204ENST00000392903 ERCC6L2Q5T890 1561 aa20.65■□□□□ 0.9
SHTN1-204ENST00000392903 NUP155O75694 1391 aa20.64■□□□□ 0.9
SHTN1-204ENST00000392903 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
SHTN1-204ENST00000392903 KIAA1107Q9UPP5 1409 aa20.63■□□□□ 0.89
SHTN1-204ENST00000392903 PRKCSHP14314 528 aaPredicted RBP20.6■□□□□ 0.89
SHTN1-204ENST00000392903 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
SHTN1-204ENST00000392903 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
SHTN1-204ENST00000392903 CDC42BPBQ9Y5S2 1711 aa20.59■□□□□ 0.89
SHTN1-204ENST00000392903 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
SHTN1-204ENST00000392903 MBD5Q9P267 1494 aa20.58■□□□□ 0.89
SHTN1-204ENST00000392903 SHANK2Q9UPX8 1470 aa20.58■□□□□ 0.88
SHTN1-204ENST00000392903 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.88
SHTN1-204ENST00000392903 DEKP35659 375 aaKnown RBP20.57■□□□□ 0.88
SHTN1-204ENST00000392903 SAMD9LQ8IVG5 1584 aa20.56■□□□□ 0.88
SHTN1-204ENST00000392903 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
SHTN1-204ENST00000392903 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
SHTN1-204ENST00000392903 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
SHTN1-204ENST00000392903 TTC37Q6PGP7 1564 aa20.53■□□□□ 0.88
SHTN1-204ENST00000392903 CCDC141Q6ZP82 1450 aa20.52■□□□□ 0.88
SHTN1-204ENST00000392903 ARHGAP5Q13017 1502 aa20.52■□□□□ 0.88
SHTN1-204ENST00000392903 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
SHTN1-204ENST00000392903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.51■□□□□ 0.87
SHTN1-204ENST00000392903 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
SHTN1-204ENST00000392903 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
SHTN1-204ENST00000392903 KDM2AQ9Y2K7 1162 aa20.5■□□□□ 0.87
SHTN1-204ENST00000392903 SYCP2Q9BX26 1530 aa20.5■□□□□ 0.87
SHTN1-204ENST00000392903 RSPH4AQ5TD94 716 aa20.49■□□□□ 0.87
SHTN1-204ENST00000392903 CNTLNQ9NXG0 1405 aa20.49■□□□□ 0.87
SHTN1-204ENST00000392903 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
SHTN1-204ENST00000392903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■□□□□ 11.1
SHTN1-204ENST00000392903 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
SHTN1-204ENST00000392903 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
SHTN1-204ENST00000392903 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
SHTN1-204ENST00000392903 CNGB1Q14028 1251 aaPredicted RBP20.44■□□□□ 0.86
SHTN1-204ENST00000392903 USP47Q96K76 1375 aa20.43■□□□□ 0.86
SHTN1-204ENST00000392903 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
SHTN1-204ENST00000392903 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
SHTN1-204ENST00000392903 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
SHTN1-204ENST00000392903 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
SHTN1-204ENST00000392903 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms