RNA–Protein interactions for RNA: ENST00000384559.1

RNU6-1235P-201, Transcript of RNA, U6 small nuclear 1235, pseudogene, humanhuman

BASIC

Gene RNU6-1235P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1235P-201ENST00000384559 PDE4AP27815 886 aa4.86□□□□□ -1.63
RNU6-1235P-201ENST00000384559 TMEM92Q6UXU6 159 aa4.86□□□□□ -1.63
RNU6-1235P-201ENST00000384559 TMEM121BQ9BXQ6 578 aaPredicted RBP4.86□□□□□ -1.63
RNU6-1235P-201ENST00000384559 C2orf72A6NCS6 295 aa4.85□□□□□ -1.63
RNU6-1235P-201ENST00000384559 G3V3G9 751 aa4.85□□□□□ -1.63
RNU6-1235P-201ENST00000384559 DDX27Q96GQ7 796 aaKnown RBP4.85□□□□□ -1.63
RNU6-1235P-201ENST00000384559 DSG2Q14126 1118 aa4.84□□□□□ -1.63
RNU6-1235P-201ENST00000384559 NBR1Q14596 966 aa4.84□□□□□ -1.63
RNU6-1235P-201ENST00000384559 E2F4Q16254 413 aa4.84□□□□□ -1.63
RNU6-1235P-201ENST00000384559 PPP1R15BQ5SWA1 713 aa4.84□□□□□ -1.63
RNU6-1235P-201ENST00000384559 L3MBTL3Q96JM7 780 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1235P-201ENST00000384559 KIF3CO14782 793 aa4.83□□□□□ -1.64
RNU6-1235P-201ENST00000384559 P3H3Q8IVL6 736 aa4.83□□□□□ -1.64
RNU6-1235P-201ENST00000384559 TMC2Q8TDI7 906 aa4.83□□□□□ -1.64
RNU6-1235P-201ENST00000384559 GPHNQ9NQX3 736 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1235P-201ENST00000384559 POTEB2H3BUK9 544 aa4.82□□□□□ -1.64
RNU6-1235P-201ENST00000384559 POTEJP0CG39 1038 aa4.81□□□□□ -1.64
RNU6-1235P-201ENST00000384559 PRKCSHP14314 528 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1235P-201ENST00000384559 CAMK2BQ13554 666 aa4.81□□□□□ -1.64
RNU6-1235P-201ENST00000384559 C3orf67Q6ZVT6 689 aa4.81□□□□□ -1.64
RNU6-1235P-201ENST00000384559 PLPP6Q8IY26 295 aa4.81□□□□□ -1.64
RNU6-1235P-201ENST00000384559 EMILIN3Q9NT22 766 aa4.81□□□□□ -1.64
RNU6-1235P-201ENST00000384559 FOXK1P85037 733 aa4.8□□□□□ -1.64
RNU6-1235P-201ENST00000384559 DPYSL4O14531 572 aa4.78□□□□□ -1.64
RNU6-1235P-201ENST00000384559 SEMA3EO15041 775 aa4.78□□□□□ -1.64
RNU6-1235P-201ENST00000384559 ARHGEF1Q92888 912 aaKnown RBP4.78□□□□□ -1.64
RNU6-1235P-201ENST00000384559 UPF1Q92900 1129 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-1235P-201ENST00000384559 TPRNQ4KMQ1 711 aa4.77□□□□□ -1.65
RNU6-1235P-201ENST00000384559 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.77□□□□□ -1.65
RNU6-1235P-201ENST00000384559 ARIH1Q9Y4X5 557 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1235P-201ENST00000384559 TESPA1A2RU30 521 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1235P-201ENST00000384559 MLLT3P42568 568 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1235P-201ENST00000384559 OXER1Q8TDS5 423 aa4.74□□□□□ -1.65
RNU6-1235P-201ENST00000384559 LMOD2Q6P5Q4 547 aa4.73□□□□□ -1.65
RNU6-1235P-201ENST00000384559 MAP3K9P80192 1104 aa4.72□□□□□ -1.65
RNU6-1235P-201ENST00000384559 PDIA6Q15084 440 aa4.72□□□□□ -1.65
RNU6-1235P-201ENST00000384559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU6-1235P-201ENST00000384559 SLAIN1Q8ND83 568 aa4.72□□□□□ -1.65
RNU6-1235P-201ENST00000384559 SCUBE2Q9NQ36 999 aa4.71□□□□□ -1.66
RNU6-1235P-201ENST00000384559 SPDYE16A6NNV3 312 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1235P-201ENST00000384559 HOXB3P14651 431 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1235P-201ENST00000384559 KHSRPQ92945 711 aaKnown RBP eCLIP4.7□□□□□ -1.66
RNU6-1235P-201ENST00000384559 GRXCR2A6NFK2 248 aa4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 EVI5O60447 810 aa4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 SLC34A2O95436 690 aa4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 RBM26Q5T8P6 1007 aaKnown RBP4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 PTCD2Q8WV60 388 aaKnown RBP4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 OTUD5Q96G74 571 aa4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 PCDHGA4Q9Y5G9 962 aa4.69□□□□□ -1.66
RNU6-1235P-201ENST00000384559 PRIM1P49642 420 aaKnown RBP4.68□□□□□ -1.66
RNU6-1235P-201ENST00000384559 MAMSTRQ6ZN01 415 aa4.68□□□□□ -1.66
RNU6-1235P-201ENST00000384559 DDX12PQ92771 950 aa4.68□□□□□ -1.66
RNU6-1235P-201ENST00000384559 TULP1O00294 542 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1235P-201ENST00000384559 LHX8Q68G74 356 aa4.67□□□□□ -1.66
RNU6-1235P-201ENST00000384559 ZC3H15Q8WU90 426 aaKnown RBP4.67□□□□□ -1.66
RNU6-1235P-201ENST00000384559 TBC1D12O60347 775 aa4.66□□□□□ -1.66
RNU6-1235P-201ENST00000384559 NUDT7P0C024 238 aa4.66□□□□□ -1.66
RNU6-1235P-201ENST00000384559 ARSIQ5FYB1 569 aa4.66□□□□□ -1.66
RNU6-1235P-201ENST00000384559 SMYD5Q6GMV2 418 aa4.66□□□□□ -1.66
RNU6-1235P-201ENST00000384559 KDM4FA0A1W2PPD8 638 aa4.65□□□□□ -1.67
RNU6-1235P-201ENST00000384559 OSBPP22059 807 aa4.65□□□□□ -1.67
RNU6-1235P-201ENST00000384559 PTGER2P43116 358 aa4.65□□□□□ -1.67
RNU6-1235P-201ENST00000384559 DOK7Q18PE1 504 aa4.65□□□□□ -1.67
RNU6-1235P-201ENST00000384559 GPR153Q6NV75 609 aa4.65□□□□□ -1.67
RNU6-1235P-201ENST00000384559 GPIHBP1Q8IV16 184 aa4.65□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ZNF316A6NFI3 1004 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1235P-201ENST00000384559 GPR37O15354 613 aa4.64□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ANO8Q9HCE9 1232 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1235P-201ENST00000384559 CDHR5Q9HBB8 845 aa4.63□□□□□ -1.67
RNU6-1235P-201ENST00000384559 NUTM2FA1L443 756 aa4.62□□□□□ -1.67
RNU6-1235P-201ENST00000384559 RIMBP2O15034 1052 aa4.62□□□□□ -1.67
RNU6-1235P-201ENST00000384559 PHF14O94880 888 aa4.62□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ZNF710Q8N1W2 664 aa4.62□□□□□ -1.67
RNU6-1235P-201ENST00000384559 RBM33Q96EV2 1170 aaKnown RBP4.62□□□□□ -1.67
RNU6-1235P-201ENST00000384559 PCDHGA10Q9Y5H3 936 aa4.62□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ZMYND10O75800 440 aa4.61□□□□□ -1.67
RNU6-1235P-201ENST00000384559 FOSBP53539 338 aa4.61□□□□□ -1.67
RNU6-1235P-201ENST00000384559 EN1Q05925 392 aaPredicted RBP4.61□□□□□ -1.67
RNU6-1235P-201ENST00000384559 TSR1Q2NL82 804 aaKnown RBP4.61□□□□□ -1.67
RNU6-1235P-201ENST00000384559 SLC24A3Q9HC58 644 aa4.61□□□□□ -1.67
RNU6-1235P-201ENST00000384559 LHX6Q9UPM6 363 aa4.61□□□□□ -1.67
RNU6-1235P-201ENST00000384559 MAP3K7O43318 606 aa4.6□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ZNF454Q8N9F8 522 aa4.6□□□□□ -1.67
RNU6-1235P-201ENST00000384559 JPH4Q96JJ6 628 aa4.6□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ZSWIM6Q9HCJ5 1215 aa4.6□□□□□ -1.67
RNU6-1235P-201ENST00000384559 SNPHO15079 494 aa4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 HOXB1P14653 301 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 FECHP22830 423 aa4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 TYW1BQ6NUM6 668 aa4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 BARGINQ6ZT62 677 aa4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 EPAS1Q99814 870 aa4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ADAM33Q9BZ11 813 aa4.59□□□□□ -1.67
RNU6-1235P-201ENST00000384559 ST18O60284 1047 aa4.57□□□□□ -1.68
RNU6-1235P-201ENST00000384559 FCHSD2O94868 740 aa4.57□□□□□ -1.68
RNU6-1235P-201ENST00000384559 PTGDRQ13258 359 aa4.57□□□□□ -1.68
RNU6-1235P-201ENST00000384559 ZDHHC16Q969W1 377 aa4.57□□□□□ -1.68
RNU6-1235P-201ENST00000384559 NPDC1Q9NQX5 325 aaPredicted RBP4.57□□□□□ -1.68
RNU6-1235P-201ENST00000384559 GNPATO15228 680 aa4.56□□□□□ -1.68
RNU6-1235P-201ENST00000384559 MARVELD3Q96A59 401 aa4.56□□□□□ -1.68
RNU6-1235P-201ENST00000384559 COL9A1P20849 921 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms