RNA–Protein interactions for RNA: ENST00000381750.8

RCL1-204, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCL1, Length 2,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-204ENST00000381750 CHIC2Q9UKJ5 165 aa23.45■■□□□ 1.35
RCL1-204ENST00000381750 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
RCL1-204ENST00000381750 PLCH2O75038 1416 aa23.42■■□□□ 1.34
RCL1-204ENST00000381750 PREX2Q70Z35 1606 aa23.42■■□□□ 1.34
RCL1-204ENST00000381750 ARHGAP5Q13017 1502 aa23.42■■□□□ 1.34
RCL1-204ENST00000381750 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.341e-6■■■■■ 29
RCL1-204ENST00000381750 ABCC5O15440 1437 aa23.4■■□□□ 1.34
RCL1-204ENST00000381750 MAPKBP1O60336 1514 aa23.39■■□□□ 1.34
RCL1-204ENST00000381750 MYO5CQ9NQX4 1742 aa23.38■■□□□ 1.33
RCL1-204ENST00000381750 DAPK1P53355 1430 aa23.38■■□□□ 1.33
RCL1-204ENST00000381750 ABCA9Q8IUA7 1624 aa23.37■■□□□ 1.33
RCL1-204ENST00000381750 SAMD9LQ8IVG5 1584 aa23.37■■□□□ 1.33
RCL1-204ENST00000381750 EFCAB2Q5VUJ9 269 aa23.36■■□□□ 1.33
RCL1-204ENST00000381750 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
RCL1-204ENST00000381750 DNAJC5Q9H3Z4 198 aa23.34■■□□□ 1.33
RCL1-204ENST00000381750 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.33
RCL1-204ENST00000381750 MBD5Q9P267 1494 aa23.33■■□□□ 1.33
RCL1-204ENST00000381750 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.33
RCL1-204ENST00000381750 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
RCL1-204ENST00000381750 CD109Q6YHK3 1445 aa23.32■■□□□ 1.32
RCL1-204ENST00000381750 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
RCL1-204ENST00000381750 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
RCL1-204ENST00000381750 SYCP2Q9BX26 1530 aa23.29■■□□□ 1.32
RCL1-204ENST00000381750 ARHGEF12Q9NZN5 1544 aa23.29■■□□□ 1.32
RCL1-204ENST00000381750 FANCAO15360 1455 aa23.29■■□□□ 1.32
RCL1-204ENST00000381750 HFM1A2PYH4 1435 aa23.28■■□□□ 1.32
RCL1-204ENST00000381750 NAIPQ13075 1403 aa23.28■■□□□ 1.32
RCL1-204ENST00000381750 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
RCL1-204ENST00000381750 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
RCL1-204ENST00000381750 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
RCL1-204ENST00000381750 ARAP3Q8WWN8 1544 aa23.26■■□□□ 1.31
RCL1-204ENST00000381750 KIAA1107Q9UPP5 1409 aa23.25■■□□□ 1.31
RCL1-204ENST00000381750 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
RCL1-204ENST00000381750 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
RCL1-204ENST00000381750 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
RCL1-204ENST00000381750 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
RCL1-204ENST00000381750 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
RCL1-204ENST00000381750 RSPH4AQ5TD94 716 aa23.21■■□□□ 1.31
RCL1-204ENST00000381750 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
RCL1-204ENST00000381750 ARHGEF5Q12774 1597 aa23.21■■□□□ 1.31
RCL1-204ENST00000381750 ROCK1Q13464 1354 aa23.21■■□□□ 1.31
RCL1-204ENST00000381750 ABCC1P33527 1531 aa23.21■■□□□ 1.31
RCL1-204ENST00000381750 DIP2BQ9P265 1576 aa23.2■■□□□ 1.3
RCL1-204ENST00000381750 HRCP23327 699 aa23.19■■□□□ 1.3
RCL1-204ENST00000381750 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
RCL1-204ENST00000381750 SCAPERQ9BY12 1400 aa23.18■■□□□ 1.3
RCL1-204ENST00000381750 ADGRL1O94910 1474 aa23.18■■□□□ 1.3
RCL1-204ENST00000381750 GLI2P10070 1586 aa23.17■■□□□ 1.3
RCL1-204ENST00000381750 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
RCL1-204ENST00000381750 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
RCL1-204ENST00000381750 SHANK2Q9UPX8 1470 aa23.16■■□□□ 1.3
RCL1-204ENST00000381750 MAP3K4Q9Y6R4 1608 aa23.16■■□□□ 1.3
RCL1-204ENST00000381750 KDM6BO15054 1643 aa23.15■■□□□ 1.3
RCL1-204ENST00000381750 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
RCL1-204ENST00000381750 GCC2Q8IWJ2 1684 aa23.11■■□□□ 1.29
RCL1-204ENST00000381750 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
RCL1-204ENST00000381750 SPAG9O60271 1321 aaKnown RBP23.09■■□□□ 1.29
RCL1-204ENST00000381750 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
RCL1-204ENST00000381750 RAPGEF3O95398 923 aa23.08■■□□□ 1.29
RCL1-204ENST00000381750 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
RCL1-204ENST00000381750 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
RCL1-204ENST00000381750 NEO1Q92859 1461 aa23.07■■□□□ 1.28
RCL1-204ENST00000381750 ANKRD50Q9ULJ7 1429 aa23.06■■□□□ 1.28
RCL1-204ENST00000381750 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
RCL1-204ENST00000381750 MYT1LQ9UL68 1186 aa23.05■■□□□ 1.28
RCL1-204ENST00000381750 MAST1Q9Y2H9 1570 aa23.04■■□□□ 1.28
RCL1-204ENST00000381750 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
RCL1-204ENST00000381750 POGZQ7Z3K3 1410 aa23.01■■□□□ 1.27
RCL1-204ENST00000381750 PPRC1Q5VV67 1664 aaKnown RBP23.01■■□□□ 1.27
RCL1-204ENST00000381750 ZNF518AQ6AHZ1 1483 aa23.01■■□□□ 1.27
RCL1-204ENST00000381750 ZFYVE16Q7Z3T8 1539 aa23■■□□□ 1.27
RCL1-204ENST00000381750 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
RCL1-204ENST00000381750 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
RCL1-204ENST00000381750 DENND4BO75064 1496 aaPredicted RBP22.99■■□□□ 1.27
RCL1-204ENST00000381750 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
RCL1-204ENST00000381750 PLXNC1O60486 1568 aa22.96■■□□□ 1.27
RCL1-204ENST00000381750 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
RCL1-204ENST00000381750 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
RCL1-204ENST00000381750 TEX14Q8IWB6 1497 aa22.95■■□□□ 1.26
RCL1-204ENST00000381750 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
RCL1-204ENST00000381750 INO80Q9ULG1 1556 aaPredicted RBP22.94■■□□□ 1.26
RCL1-204ENST00000381750 KDM5CP41229 1560 aa22.93■■□□□ 1.26
RCL1-204ENST00000381750 FOXD1Q16676 465 aa22.92■■□□□ 1.26
RCL1-204ENST00000381750 DUOX2Q9NRD8 1548 aa22.91■■□□□ 1.26
RCL1-204ENST00000381750 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
RCL1-204ENST00000381750 CLSPNQ9HAW4 1339 aa22.91■■□□□ 1.26
RCL1-204ENST00000381750 COL17A1Q9UMD9 1497 aaPredicted RBP22.9■■□□□ 1.26
RCL1-204ENST00000381750 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
RCL1-204ENST00000381750 NUP155O75694 1391 aa22.9■■□□□ 1.26
RCL1-204ENST00000381750 MLH3Q9UHC1 1453 aa22.89■■□□□ 1.26
RCL1-204ENST00000381750 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.25
RCL1-204ENST00000381750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.252e-7■□□□□ 11.2
RCL1-204ENST00000381750 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
RCL1-204ENST00000381750 PZPP20742 1482 aa22.87■■□□□ 1.25
RCL1-204ENST00000381750 ERBINQ96RT1 1412 aa22.86■■□□□ 1.25
RCL1-204ENST00000381750 FRMPD1Q5SYB0 1578 aa22.86■■□□□ 1.25
RCL1-204ENST00000381750 HECW2Q9P2P5 1572 aa22.85■■□□□ 1.25
RCL1-204ENST00000381750 DHX29Q7Z478 1369 aaKnown RBP22.85■■□□□ 1.25
RCL1-204ENST00000381750 YEATS2Q9ULM3 1422 aa22.84■■□□□ 1.25
RCL1-204ENST00000381750 NEUROD1Q13562 356 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms