RNA–Protein interactions for RNA: ENST00000381396.9

CCP110-201, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCP110, Length 5,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-201ENST00000381396 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCP110-201ENST00000381396 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.81
CCP110-201ENST00000381396 FOXD1Q16676 465 aa20.08■□□□□ 0.8
CCP110-201ENST00000381396 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
CCP110-201ENST00000381396 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
CCP110-201ENST00000381396 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
CCP110-201ENST00000381396 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
CCP110-201ENST00000381396 FTSJ3Q8IY81 847 aaKnown RBP20.06■□□□□ 0.8
CCP110-201ENST00000381396 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
CCP110-201ENST00000381396 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
CCP110-201ENST00000381396 ARXQ96QS3 562 aa20.05■□□□□ 0.8
CCP110-201ENST00000381396 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCP110-201ENST00000381396 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
CCP110-201ENST00000381396 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
CCP110-201ENST00000381396 HSPA5P11021 654 aaKnown RBP20.04■□□□□ 0.8
CCP110-201ENST00000381396 MS4A1P11836 297 aa20.02■□□□□ 0.8
CCP110-201ENST00000381396 ANP32BQ92688 251 aaKnown RBP20■□□□□ 0.79
CCP110-201ENST00000381396 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
CCP110-201ENST00000381396 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
CCP110-201ENST00000381396 KTN1Q86UP2 1357 aaKnown RBP19.98■□□□□ 0.79
CCP110-201ENST00000381396 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
CCP110-201ENST00000381396 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
CCP110-201ENST00000381396 SOX12O15370 315 aa19.95■□□□□ 0.78
CCP110-201ENST00000381396 CCDC144AA2RUR9 1427 aa19.94■□□□□ 0.78
CCP110-201ENST00000381396 TERF2IPQ9NYB0 399 aa19.93■□□□□ 0.78
CCP110-201ENST00000381396 MYOM3Q5VTT5 1437 aa19.92■□□□□ 0.78
CCP110-201ENST00000381396 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
CCP110-201ENST00000381396 PAK3O75914 559 aaPredicted RBP19.92■□□□□ 0.78
CCP110-201ENST00000381396 FAM69CQ0P6D2 419 aa19.91■□□□□ 0.78
CCP110-201ENST00000381396 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
CCP110-201ENST00000381396 NPHP1O15259 732 aa19.91■□□□□ 0.78
CCP110-201ENST00000381396 CASC1Q6TDU7 716 aa19.91■□□□□ 0.78
CCP110-201ENST00000381396 L3MBTL2Q969R5 705 aa19.9■□□□□ 0.78
CCP110-201ENST00000381396 NESP48681 1621 aa19.9■□□□□ 0.78
CCP110-201ENST00000381396 RALBP1Q15311 655 aa19.9■□□□□ 0.78
CCP110-201ENST00000381396 CUX1P39880 1505 aa19.89■□□□□ 0.78
CCP110-201ENST00000381396 VGFO15240 615 aaPredicted RBP19.88■□□□□ 0.77
CCP110-201ENST00000381396 CALD1Q05682 793 aaKnown RBP19.87■□□□□ 0.77
CCP110-201ENST00000381396 FRAT1Q92837 279 aaPredicted RBP19.87■□□□□ 0.77
CCP110-201ENST00000381396 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
CCP110-201ENST00000381396 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
CCP110-201ENST00000381396 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
CCP110-201ENST00000381396 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
CCP110-201ENST00000381396 BECN1Q14457 450 aa19.84■□□□□ 0.77
CCP110-201ENST00000381396 CHMP4AQ9BY43 222 aa19.83■□□□□ 0.77
CCP110-201ENST00000381396 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.77
CCP110-201ENST00000381396 NGDNQ8NEJ9 315 aaKnown RBP19.83■□□□□ 0.76
CCP110-201ENST00000381396 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
CCP110-201ENST00000381396 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
CCP110-201ENST00000381396 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
CCP110-201ENST00000381396 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
CCP110-201ENST00000381396 DDRGK1Q96HY6 314 aa19.81■□□□□ 0.76
CCP110-201ENST00000381396 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
CCP110-201ENST00000381396 U2AF1L5P0DN76 240 aaPredicted RBP19.8■□□□□ 0.76
CCP110-201ENST00000381396 U2AF1Q01081 240 aaKnown RBP eCLIP19.8■□□□□ 0.76
CCP110-201ENST00000381396 OS9Q13438 667 aaPredicted RBP19.79■□□□□ 0.76
CCP110-201ENST00000381396 FGD6Q6ZV73 1430 aa19.78■□□□□ 0.76
CCP110-201ENST00000381396 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
CCP110-201ENST00000381396 KIF21BO75037 1637 aa19.78■□□□□ 0.76
CCP110-201ENST00000381396 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
CCP110-201ENST00000381396 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.75
CCP110-201ENST00000381396 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
CCP110-201ENST00000381396 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
CCP110-201ENST00000381396 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
CCP110-201ENST00000381396 KIF15Q9NS87 1388 aa19.75■□□□□ 0.75
CCP110-201ENST00000381396 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
CCP110-201ENST00000381396 PPP4R2Q9NY27 417 aa19.74■□□□□ 0.75
CCP110-201ENST00000381396 EFCAB5A4FU69 1503 aa19.74■□□□□ 0.75
CCP110-201ENST00000381396 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCP110-201ENST00000381396 IPO8O15397 1037 aaKnown RBP19.73■□□□□ 0.75
CCP110-201ENST00000381396 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
CCP110-201ENST00000381396 LRRC9Q6ZRR7 1453 aa19.72■□□□□ 0.75
CCP110-201ENST00000381396 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
CCP110-201ENST00000381396 EVC2Q86UK5 1308 aa19.71■□□□□ 0.75
CCP110-201ENST00000381396 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
CCP110-201ENST00000381396 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
CCP110-201ENST00000381396 NCLP19338 710 aaKnown RBP19.7■□□□□ 0.74
CCP110-201ENST00000381396 GOLGA2Q08379 1002 aa19.7■□□□□ 0.74
CCP110-201ENST00000381396 ARHGAP5Q13017 1502 aa19.69■□□□□ 0.74
CCP110-201ENST00000381396 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
CCP110-201ENST00000381396 AMPHP49418 695 aa19.68■□□□□ 0.74
CCP110-201ENST00000381396 NLRP13Q86W25 1043 aa19.68■□□□□ 0.74
CCP110-201ENST00000381396 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
CCP110-201ENST00000381396 LMOD3Q0VAK6 560 aa19.67■□□□□ 0.74
CCP110-201ENST00000381396 GOLGA6L22H0YM25 854 aa19.67■□□□□ 0.74
CCP110-201ENST00000381396 CCDC9Q9Y3X0 531 aaKnown RBP19.66■□□□□ 0.74
CCP110-201ENST00000381396 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
CCP110-201ENST00000381396 ZNF644Q9H582 1327 aaPredicted RBP19.65■□□□□ 0.74
CCP110-201ENST00000381396 ST20-MTHFSA0A0A6YYL1 179 aa19.65■□□□□ 0.74
CCP110-201ENST00000381396 PLEKHH2Q8IVE3 1493 aa19.65■□□□□ 0.74
CCP110-201ENST00000381396 PRXQ9BXM0 1461 aa19.64■□□□□ 0.74
CCP110-201ENST00000381396 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
CCP110-201ENST00000381396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCP110-201ENST00000381396 RGS3P49796 1198 aa19.62■□□□□ 0.73
CCP110-201ENST00000381396 ANP32EQ9BTT0 268 aa19.62■□□□□ 0.73
CCP110-201ENST00000381396 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
CCP110-201ENST00000381396 NUTM2FA1L443 756 aa19.61■□□□□ 0.73
CCP110-201ENST00000381396 CGNL1Q0VF96 1302 aa19.61■□□□□ 0.73
CCP110-201ENST00000381396 HDAC5Q9UQL6 1122 aa19.61■□□□□ 0.73
CCP110-201ENST00000381396 COG3Q96JB2 828 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms