RNA–Protein interactions for RNA: ENST00000381396.9

CCP110-201, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCP110, Length 5,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-201ENST00000381396 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
CCP110-201ENST00000381396 NISCHQ9Y2I1 1504 aa27.4■■□□□ 1.98
CCP110-201ENST00000381396 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
CCP110-201ENST00000381396 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
CCP110-201ENST00000381396 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
CCP110-201ENST00000381396 FAM9AQ8IZU1 332 aaPredicted RBP24.43■■□□□ 1.5
CCP110-201ENST00000381396 APLP2Q06481 763 aa24.4■■□□□ 1.5
CCP110-201ENST00000381396 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
CCP110-201ENST00000381396 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
CCP110-201ENST00000381396 ABCC9O60706 1549 aa23.68■■□□□ 1.38
CCP110-201ENST00000381396 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
CCP110-201ENST00000381396 ATP1B4Q9UN42 357 aaPredicted RBP23.6■■□□□ 1.37
CCP110-201ENST00000381396 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.37
CCP110-201ENST00000381396 PCGF6Q9BYE7 350 aa23.34■■□□□ 1.33
CCP110-201ENST00000381396 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
CCP110-201ENST00000381396 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
CCP110-201ENST00000381396 ZEB1P37275 1124 aaPredicted RBP23.18■■□□□ 1.3
CCP110-201ENST00000381396 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
CCP110-201ENST00000381396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23■■□□□ 1.27
CCP110-201ENST00000381396 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
CCP110-201ENST00000381396 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
CCP110-201ENST00000381396 MYT1LQ9UL68 1186 aa22.84■■□□□ 1.25
CCP110-201ENST00000381396 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
CCP110-201ENST00000381396 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
CCP110-201ENST00000381396 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
CCP110-201ENST00000381396 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
CCP110-201ENST00000381396 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.22
CCP110-201ENST00000381396 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.21
CCP110-201ENST00000381396 ITGAEP38570 1179 aa22.64■■□□□ 1.21
CCP110-201ENST00000381396 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
CCP110-201ENST00000381396 FBLN2P98095 1184 aa22.43■■□□□ 1.18
CCP110-201ENST00000381396 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
CCP110-201ENST00000381396 NEFLP07196 543 aa22.29■■□□□ 1.16
CCP110-201ENST00000381396 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
CCP110-201ENST00000381396 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
CCP110-201ENST00000381396 NACADO15069 1562 aa22.2■■□□□ 1.15
CCP110-201ENST00000381396 POLR3GLQ9BT43 218 aa22.2■■□□□ 1.14
CCP110-201ENST00000381396 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
CCP110-201ENST00000381396 YTHDC1Q96MU7 727 aaKnown RBP22.09■■□□□ 1.13
CCP110-201ENST00000381396 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
CCP110-201ENST00000381396 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
CCP110-201ENST00000381396 HRCP23327 699 aa22.02■■□□□ 1.12
CCP110-201ENST00000381396 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
CCP110-201ENST00000381396 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
CCP110-201ENST00000381396 NPM1P06748 294 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCP110-201ENST00000381396 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
CCP110-201ENST00000381396 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
CCP110-201ENST00000381396 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
CCP110-201ENST00000381396 CNGB1Q14028 1251 aaPredicted RBP21.79■■□□□ 1.08
CCP110-201ENST00000381396 BAZ1BQ9UIG0 1483 aaKnown RBP21.78■■□□□ 1.08
CCP110-201ENST00000381396 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
CCP110-201ENST00000381396 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
CCP110-201ENST00000381396 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
CCP110-201ENST00000381396 ZNF326Q5BKZ1 582 aaKnown RBP21.7■■□□□ 1.06
CCP110-201ENST00000381396 ESF1Q9H501 851 aaKnown RBP21.67■■□□□ 1.06
CCP110-201ENST00000381396 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
CCP110-201ENST00000381396 BCANQ96GW7 911 aa21.59■■□□□ 1.05
CCP110-201ENST00000381396 EEA1Q15075 1411 aa21.58■■□□□ 1.05
CCP110-201ENST00000381396 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
CCP110-201ENST00000381396 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
CCP110-201ENST00000381396 DAXXQ9UER7 740 aaPredicted RBP21.5■■□□□ 1.03
CCP110-201ENST00000381396 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
CCP110-201ENST00000381396 ANP32CO43423 234 aa21.47■■□□□ 1.03
CCP110-201ENST00000381396 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
CCP110-201ENST00000381396 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
CCP110-201ENST00000381396 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
CCP110-201ENST00000381396 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
CCP110-201ENST00000381396 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
CCP110-201ENST00000381396 CLIP1P30622 1438 aa21.42■■□□□ 1.02
CCP110-201ENST00000381396 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
CCP110-201ENST00000381396 NEFMP07197 916 aa21.35■■□□□ 1.01
CCP110-201ENST00000381396 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
CCP110-201ENST00000381396 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
CCP110-201ENST00000381396 TONSLQ96HA7 1378 aa21.33■■□□□ 1.01
CCP110-201ENST00000381396 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
CCP110-201ENST00000381396 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
CCP110-201ENST00000381396 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
CCP110-201ENST00000381396 SMARCA2P51531 1590 aa21.28■■□□□ 1
CCP110-201ENST00000381396 CHIC2Q9UKJ5 165 aa21.27■■□□□ 1
CCP110-201ENST00000381396 CLSPNQ9HAW4 1339 aa21.25■□□□□ 0.99
CCP110-201ENST00000381396 CEP164Q9UPV0 1460 aa21.24■□□□□ 0.99
CCP110-201ENST00000381396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCP110-201ENST00000381396 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
CCP110-201ENST00000381396 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
CCP110-201ENST00000381396 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
CCP110-201ENST00000381396 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
CCP110-201ENST00000381396 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
CCP110-201ENST00000381396 ZBTB47Q9UFB7 747 aaPredicted RBP21.15■□□□□ 0.98
CCP110-201ENST00000381396 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.97
CCP110-201ENST00000381396 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
CCP110-201ENST00000381396 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
CCP110-201ENST00000381396 CUX2O14529 1486 aa21.07■□□□□ 0.96
CCP110-201ENST00000381396 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
CCP110-201ENST00000381396 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
CCP110-201ENST00000381396 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
CCP110-201ENST00000381396 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
CCP110-201ENST00000381396 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
CCP110-201ENST00000381396 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
CCP110-201ENST00000381396 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
CCP110-201ENST00000381396 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms