RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
RFC3-201ENST00000380071 RAPGEF6Q8TEU7 1601 aa17.01■□□□□ 0.31
RFC3-201ENST00000380071 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
RFC3-201ENST00000380071 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
RFC3-201ENST00000380071 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
RFC3-201ENST00000380071 CDK11AQ9UQ88 783 aaPredicted RBP17■□□□□ 0.31
RFC3-201ENST00000380071 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
RFC3-201ENST00000380071 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
RFC3-201ENST00000380071 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
RFC3-201ENST00000380071 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
RFC3-201ENST00000380071 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
RFC3-201ENST00000380071 FBLN2P98095 1184 aa16.97■□□□□ 0.31
RFC3-201ENST00000380071 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
RFC3-201ENST00000380071 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
RFC3-201ENST00000380071 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
RFC3-201ENST00000380071 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
RFC3-201ENST00000380071 RPRD2Q5VT52 1461 aaKnown RBP16.94■□□□□ 0.3
RFC3-201ENST00000380071 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
RFC3-201ENST00000380071 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
RFC3-201ENST00000380071 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
RFC3-201ENST00000380071 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
RFC3-201ENST00000380071 NEFLP07196 543 aa16.92■□□□□ 0.3
RFC3-201ENST00000380071 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
RFC3-201ENST00000380071 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
RFC3-201ENST00000380071 JPH4Q96JJ6 628 aa16.91■□□□□ 0.3
RFC3-201ENST00000380071 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
RFC3-201ENST00000380071 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
RFC3-201ENST00000380071 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
RFC3-201ENST00000380071 GPATCH8Q9UKJ3 1502 aaKnown RBP16.9■□□□□ 0.3
RFC3-201ENST00000380071 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
RFC3-201ENST00000380071 NCOA1Q15788 1441 aa16.89■□□□□ 0.29
RFC3-201ENST00000380071 CCDC7Q96M83 1385 aa16.89■□□□□ 0.29
RFC3-201ENST00000380071 KIF14Q15058 1648 aa16.89■□□□□ 0.29
RFC3-201ENST00000380071 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
RFC3-201ENST00000380071 PZPP20742 1482 aa16.88■□□□□ 0.29
RFC3-201ENST00000380071 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
RFC3-201ENST00000380071 PRKRIP1Q9H875 184 aaPredicted RBP16.85■□□□□ 0.29
RFC3-201ENST00000380071 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
RFC3-201ENST00000380071 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.29
RFC3-201ENST00000380071 KIF7Q2M1P5 1343 aa16.83■□□□□ 0.28
RFC3-201ENST00000380071 NUP160Q12769 1436 aa16.83■□□□□ 0.28
RFC3-201ENST00000380071 PKD2Q13563 968 aa16.82■□□□□ 0.28
RFC3-201ENST00000380071 ADCY10Q96PN6 1610 aa16.82■□□□□ 0.28
RFC3-201ENST00000380071 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
RFC3-201ENST00000380071 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
RFC3-201ENST00000380071 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
RFC3-201ENST00000380071 ANKRD30AQ9BXX3 1397 aa16.8■□□□□ 0.28
RFC3-201ENST00000380071 KIAA1107Q9UPP5 1409 aa16.79■□□□□ 0.28
RFC3-201ENST00000380071 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
RFC3-201ENST00000380071 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
RFC3-201ENST00000380071 IRX6P78412 446 aaPredicted RBP16.78■□□□□ 0.28
RFC3-201ENST00000380071 CROCC2H7BZ55 1655 aa16.78■□□□□ 0.28
RFC3-201ENST00000380071 ATP10BO94823 1461 aa16.77■□□□□ 0.28
RFC3-201ENST00000380071 MRS2Q9HD23 443 aa16.77■□□□□ 0.28
RFC3-201ENST00000380071 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.28
RFC3-201ENST00000380071 ABCA8O94911 1581 aa16.76■□□□□ 0.27
RFC3-201ENST00000380071 CDC42BPAQ5VT25 1732 aa16.75■□□□□ 0.27
RFC3-201ENST00000380071 ABCC10Q5T3U5 1492 aa16.75■□□□□ 0.27
RFC3-201ENST00000380071 MBD5Q9P267 1494 aa16.75■□□□□ 0.27
RFC3-201ENST00000380071 NUP155O75694 1391 aa16.73■□□□□ 0.27
RFC3-201ENST00000380071 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.27
RFC3-201ENST00000380071 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
RFC3-201ENST00000380071 POLR3GLQ9BT43 218 aa16.72■□□□□ 0.27
RFC3-201ENST00000380071 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
RFC3-201ENST00000380071 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
RFC3-201ENST00000380071 USP47Q96K76 1375 aa16.72■□□□□ 0.27
RFC3-201ENST00000380071 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
RFC3-201ENST00000380071 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
RFC3-201ENST00000380071 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
RFC3-201ENST00000380071 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
RFC3-201ENST00000380071 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
RFC3-201ENST00000380071 ANP32EQ9BTT0 268 aa16.68■□□□□ 0.26
RFC3-201ENST00000380071 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
RFC3-201ENST00000380071 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
RFC3-201ENST00000380071 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
RFC3-201ENST00000380071 PTPRGP23470 1445 aa16.66■□□□□ 0.26
RFC3-201ENST00000380071 KDM5CP41229 1560 aa16.65■□□□□ 0.26
RFC3-201ENST00000380071 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
RFC3-201ENST00000380071 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
RFC3-201ENST00000380071 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
RFC3-201ENST00000380071 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
RFC3-201ENST00000380071 KDM5DQ9BY66 1539 aa16.61■□□□□ 0.25
RFC3-201ENST00000380071 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
RFC3-201ENST00000380071 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
RFC3-201ENST00000380071 ST20-MTHFSA0A0A6YYL1 179 aa16.59■□□□□ 0.25
RFC3-201ENST00000380071 ARHGEF5Q12774 1597 aa16.59■□□□□ 0.25
RFC3-201ENST00000380071 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
RFC3-201ENST00000380071 CDC42BPBQ9Y5S2 1711 aa16.59■□□□□ 0.25
RFC3-201ENST00000380071 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.24
RFC3-201ENST00000380071 PPP4R2Q9NY27 417 aa16.58■□□□□ 0.24
RFC3-201ENST00000380071 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
RFC3-201ENST00000380071 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
RFC3-201ENST00000380071 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
RFC3-201ENST00000380071 FAM135AQ9P2D6 1515 aa16.54■□□□□ 0.24
RFC3-201ENST00000380071 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
RFC3-201ENST00000380071 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
RFC3-201ENST00000380071 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
RFC3-201ENST00000380071 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
RFC3-201ENST00000380071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.248e-7■■■□□ 16.1
RFC3-201ENST00000380071 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms