RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 NAIPQ13075 1403 aa12.3□□□□□ -0.44
OPTN-204ENST00000378752 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
OPTN-204ENST00000378752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.441e-7■■■□□ 16.3
OPTN-204ENST00000378752 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
OPTN-204ENST00000378752 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
OPTN-204ENST00000378752 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
OPTN-204ENST00000378752 PKD2Q13563 968 aa12.28□□□□□ -0.44
OPTN-204ENST00000378752 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
OPTN-204ENST00000378752 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.44
OPTN-204ENST00000378752 ERICH6BQ5W0A0 696 aa12.27□□□□□ -0.45
OPTN-204ENST00000378752 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
OPTN-204ENST00000378752 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
OPTN-204ENST00000378752 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
OPTN-204ENST00000378752 RGS3P49796 1198 aa12.24□□□□□ -0.45
OPTN-204ENST00000378752 NESP48681 1621 aa12.23□□□□□ -0.45
OPTN-204ENST00000378752 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
OPTN-204ENST00000378752 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
OPTN-204ENST00000378752 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
OPTN-204ENST00000378752 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
OPTN-204ENST00000378752 PTPN23Q9H3S7 1636 aa12.2□□□□□ -0.46
OPTN-204ENST00000378752 USP47Q96K76 1375 aa12.2□□□□□ -0.46
OPTN-204ENST00000378752 PDE4AP27815 886 aa12.2□□□□□ -0.46
OPTN-204ENST00000378752 RRP1P56182 461 aaKnown RBP12.17□□□□□ -0.46
OPTN-204ENST00000378752 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
OPTN-204ENST00000378752 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
OPTN-204ENST00000378752 SENP3Q9H4L4 574 aaPredicted RBP12.15□□□□□ -0.46
OPTN-204ENST00000378752 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
OPTN-204ENST00000378752 PNISRQ8TF01 805 aaKnown RBP12.15□□□□□ -0.46
OPTN-204ENST00000378752 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
OPTN-204ENST00000378752 CDK13Q14004 1512 aaKnown RBP12.14□□□□□ -0.47
OPTN-204ENST00000378752 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
OPTN-204ENST00000378752 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
OPTN-204ENST00000378752 NCOA1Q15788 1441 aa12.13□□□□□ -0.47
OPTN-204ENST00000378752 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
OPTN-204ENST00000378752 NUP155O75694 1391 aa12.13□□□□□ -0.47
OPTN-204ENST00000378752 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
OPTN-204ENST00000378752 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
OPTN-204ENST00000378752 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
OPTN-204ENST00000378752 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
OPTN-204ENST00000378752 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
OPTN-204ENST00000378752 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
OPTN-204ENST00000378752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
OPTN-204ENST00000378752 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
OPTN-204ENST00000378752 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
OPTN-204ENST00000378752 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
OPTN-204ENST00000378752 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 KDM6BO15054 1643 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.47
OPTN-204ENST00000378752 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.47
OPTN-204ENST00000378752 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
OPTN-204ENST00000378752 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
OPTN-204ENST00000378752 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.48
OPTN-204ENST00000378752 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
OPTN-204ENST00000378752 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
OPTN-204ENST00000378752 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
OPTN-204ENST00000378752 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
OPTN-204ENST00000378752 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
OPTN-204ENST00000378752 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
OPTN-204ENST00000378752 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
OPTN-204ENST00000378752 SLKQ9H2G2 1235 aaPredicted RBP12.06□□□□□ -0.48
OPTN-204ENST00000378752 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
OPTN-204ENST00000378752 PANK3Q9H999 370 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
OPTN-204ENST00000378752 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
OPTN-204ENST00000378752 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
OPTN-204ENST00000378752 RALBP1Q15311 655 aa12.03□□□□□ -0.48
OPTN-204ENST00000378752 WDR62O43379 1518 aa12.03□□□□□ -0.48
OPTN-204ENST00000378752 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
OPTN-204ENST00000378752 NFKBIBQ15653 356 aa12.02□□□□□ -0.48
OPTN-204ENST00000378752 KNSTRNQ9Y448 316 aa12.02□□□□□ -0.49
OPTN-204ENST00000378752 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 DAPK1P53355 1430 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 RPRD2Q5VT52 1461 aaKnown RBP12.01□□□□□ -0.49
OPTN-204ENST00000378752 DHX29Q7Z478 1369 aaKnown RBP12.01□□□□□ -0.49
OPTN-204ENST00000378752 EPRSP07814 1512 aaKnown RBP12□□□□□ -0.49
OPTN-204ENST00000378752 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
OPTN-204ENST00000378752 ADAMTS8Q9UP79 889 aa12□□□□□ -0.49
OPTN-204ENST00000378752 KDM5BQ9UGL1 1544 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
OPTN-204ENST00000378752 GSE1Q14687 1217 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
OPTN-204ENST00000378752 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 ABCC5O15440 1437 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
OPTN-204ENST00000378752 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
OPTN-204ENST00000378752 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
OPTN-204ENST00000378752 UGGT2Q9NYU1 1516 aa11.97□□□□□ -0.49
OPTN-204ENST00000378752 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
OPTN-204ENST00000378752 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms