RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 NISCHQ9Y2I1 1504 aa17.19■□□□□ 0.34
OPTN-204ENST00000378752 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
OPTN-204ENST00000378752 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
OPTN-204ENST00000378752 DCAF8L2P0C7V8 631 aa15.62■□□□□ 0.09
OPTN-204ENST00000378752 PCGF6Q9BYE7 350 aa15.37■□□□□ 0.05
OPTN-204ENST00000378752 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
OPTN-204ENST00000378752 HRCP23327 699 aa15.15■□□□□ 0.02
OPTN-204ENST00000378752 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
OPTN-204ENST00000378752 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
OPTN-204ENST00000378752 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
OPTN-204ENST00000378752 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
OPTN-204ENST00000378752 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
OPTN-204ENST00000378752 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
OPTN-204ENST00000378752 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
OPTN-204ENST00000378752 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
OPTN-204ENST00000378752 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
OPTN-204ENST00000378752 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
OPTN-204ENST00000378752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
OPTN-204ENST00000378752 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
OPTN-204ENST00000378752 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
OPTN-204ENST00000378752 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
OPTN-204ENST00000378752 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
OPTN-204ENST00000378752 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
OPTN-204ENST00000378752 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
OPTN-204ENST00000378752 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
OPTN-204ENST00000378752 GTF3C3Q9Y5Q9 886 aa14.09□□□□□ -0.15
OPTN-204ENST00000378752 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
OPTN-204ENST00000378752 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
OPTN-204ENST00000378752 CENPBP07199 599 aaPredicted RBP14.05□□□□□ -0.16
OPTN-204ENST00000378752 ACIN1Q9UKV3 1341 aaKnown RBP14.01□□□□□ -0.17
OPTN-204ENST00000378752 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
OPTN-204ENST00000378752 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
OPTN-204ENST00000378752 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
OPTN-204ENST00000378752 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
OPTN-204ENST00000378752 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.2
OPTN-204ENST00000378752 ABCC9O60706 1549 aa13.76□□□□□ -0.21
OPTN-204ENST00000378752 APLP2Q06481 763 aa13.76□□□□□ -0.21
OPTN-204ENST00000378752 NACADO15069 1562 aa13.75□□□□□ -0.21
OPTN-204ENST00000378752 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
OPTN-204ENST00000378752 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
OPTN-204ENST00000378752 MIER1Q8N108 512 aa13.69□□□□□ -0.22
OPTN-204ENST00000378752 ITGAEP38570 1179 aa13.65□□□□□ -0.23
OPTN-204ENST00000378752 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
OPTN-204ENST00000378752 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
OPTN-204ENST00000378752 BCANQ96GW7 911 aa13.55□□□□□ -0.24
OPTN-204ENST00000378752 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
OPTN-204ENST00000378752 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.247e-9■□□□□ 10
OPTN-204ENST00000378752 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
OPTN-204ENST00000378752 ABCC8Q09428 1581 aa13.52□□□□□ -0.24
OPTN-204ENST00000378752 SOGA1O94964 1423 aa13.5□□□□□ -0.25
OPTN-204ENST00000378752 WIZO95785 1651 aa13.5□□□□□ -0.25
OPTN-204ENST00000378752 MYT1Q01538 1121 aa13.48□□□□□ -0.25
OPTN-204ENST00000378752 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
OPTN-204ENST00000378752 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
OPTN-204ENST00000378752 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
OPTN-204ENST00000378752 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
OPTN-204ENST00000378752 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
OPTN-204ENST00000378752 HIRIP3Q9BW71 556 aaPredicted RBP13.32□□□□□ -0.28
OPTN-204ENST00000378752 CLIP1P30622 1438 aa13.28□□□□□ -0.28
OPTN-204ENST00000378752 SUPT16HQ9Y5B9 1047 aaKnown RBP13.28□□□□□ -0.28
OPTN-204ENST00000378752 KCNH8Q96L42 1107 aa13.27□□□□□ -0.28
OPTN-204ENST00000378752 FKBP8Q14318 412 aa13.25□□□□□ -0.29
OPTN-204ENST00000378752 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
OPTN-204ENST00000378752 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
OPTN-204ENST00000378752 NEFLP07196 543 aa13.23□□□□□ -0.29
OPTN-204ENST00000378752 CNGB1Q14028 1251 aaPredicted RBP13.22□□□□□ -0.29
OPTN-204ENST00000378752 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
OPTN-204ENST00000378752 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
OPTN-204ENST00000378752 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
OPTN-204ENST00000378752 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
OPTN-204ENST00000378752 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
OPTN-204ENST00000378752 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
OPTN-204ENST00000378752 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
OPTN-204ENST00000378752 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
OPTN-204ENST00000378752 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
OPTN-204ENST00000378752 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
OPTN-204ENST00000378752 EEA1Q15075 1411 aa13.09□□□□□ -0.31
OPTN-204ENST00000378752 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
OPTN-204ENST00000378752 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
OPTN-204ENST00000378752 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
OPTN-204ENST00000378752 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
OPTN-204ENST00000378752 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
OPTN-204ENST00000378752 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
OPTN-204ENST00000378752 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
OPTN-204ENST00000378752 ANP32CO43423 234 aa13.02□□□□□ -0.32
OPTN-204ENST00000378752 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
OPTN-204ENST00000378752 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
OPTN-204ENST00000378752 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
OPTN-204ENST00000378752 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
OPTN-204ENST00000378752 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
OPTN-204ENST00000378752 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
OPTN-204ENST00000378752 ARID3CA6NKF2 412 aa12.93□□□□□ -0.34
OPTN-204ENST00000378752 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
OPTN-204ENST00000378752 CLSPNQ9HAW4 1339 aa12.93□□□□□ -0.34
OPTN-204ENST00000378752 CCNB3Q8WWL7 1395 aa12.91□□□□□ -0.34
OPTN-204ENST00000378752 SYNJ1O43426 1573 aa12.91□□□□□ -0.34
OPTN-204ENST00000378752 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
OPTN-204ENST00000378752 RAB3GAP2Q9H2M9 1393 aa12.9□□□□□ -0.34
OPTN-204ENST00000378752 KIF21BO75037 1637 aa12.89□□□□□ -0.35
OPTN-204ENST00000378752 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms